Nocardioides sp. JS614: Noca_3253
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Entry
Noca_3253 CDS
T00443
Name
(GenBank) Ribonuclease H
KO
K03470
ribonuclease HII [EC:
3.1.26.4
]
Organism
nca
Nocardioides sp. JS614
Pathway
nca03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
nca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Noca_3253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nca03032
]
Noca_3253
Enzymes [BR:
nca01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
Noca_3253
DNA replication proteins [BR:
nca03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
Noca_3253
Elongation factors (archaeal)
Noca_3253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_HII
BIV_Env
Motif
Other DBs
NCBI-ProteinID:
ABL82755
UniProt:
A1SLS0
LinkDB
All DBs
Position
complement(3455003..3455725)
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AA seq
240 aa
AA seq
DB search
MSELPRGSTIRKDAGLYGYERALRRHGIEPIAGVDEAGRGACAGPLVAGAAILPPGKAGI
VPGLADSKLLTERARERCYEQIVRRAVSWSVVVVSHEECDRLGMHVANVEALRRAVALLD
LPPAYVLTDGFPVDGLGVPGLAVWKGDRVAACISAASVLAKVTRDRIMTELDASWPAYDF
KTHKGYITEVHSAALTAHGPSPIHRMRFVNVRRAAGLEPLDPVQNGEEAVELVEVTEGTR
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagctgccccgcggatccacgatccgcaaggacgccggcctgtacggctacgag
cgggccctgcgccggcacgggatcgagccgatcgccggcgtcgacgaggccggccgtggc
gcctgcgccgggccgctggtcgccggcgccgccatcctgcctcccggcaaggccggcatc
gtccccggcctcgcggactccaagctgctcaccgagcgggcgcgggagcgttgctacgag
cagatcgtgcgccgggcggtctcctggtcggtcgtcgtggtctcgcacgaggagtgcgac
cggctcggcatgcacgtggccaacgtcgaggccctgcggcgggcggtggcgctgctcgac
ctgccgccggcgtacgtcctgaccgacgggttcccggtcgacggcctcggtgtccccggc
ctcgcggtgtggaagggcgaccgggtggccgcgtgcatctccgcggcctcggtcctcgcg
aaggtcacccgggaccggatcatgaccgagctcgacgcgtcctggccggcgtacgacttc
aagacccacaagggctacatcaccgaggtgcacagcgccgcgctcaccgcgcacggaccc
tcgccgatccaccggatgcgcttcgtcaacgtccggcgggccgcggggctcgagccgctg
gatcccgtgcagaatggtgaggaagcggtcgagctggtcgaggtcacggagggaacgaga
tga
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