Sciurus carolinensis (gray squirrel): 124962740
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Entry
124962740 CDS
T08117
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR isoform X1
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04060
Cytokine-cytokine receptor interaction
ncar04064
NF-kappa B signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
124962740
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
124962740
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
ncar04050
]
124962740
Cytokine receptors [BR:
ncar04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
124962740
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Gene cluster
GFIT
Motif
Pfam:
KI67R
Orf78
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
124962740
NCBI-ProteinID:
XP_047377854
EnsemblRapid:
ENSSCRG00010015024
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Position
13:16887359..16975707
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AA seq
449 aa
AA seq
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MAHVEDSRWTPWLPVLVASLMCSAGAEYSNCGENEYYNQTTGLCHQCPPCGPGEEPYMSC
GYGTKDEDYGCVPCPAEKFSKGGYQICRRHKDCEGFFRATVLTPGDMENDAECGPCLPGY
YMLENRPRNIYGMVCYSCLLAPPNTKECVGATLGVSANSPSTSGGSTLSPFQHAHKAELS
SQGHLATALIIAMSTIFIMAIAIVLIIMFYIMKTKPSAPACCTSPPGKSVEAPVSKDEEK
KEAPDSVVIFSEKDEFEKLTATPAKTTKSENDASSENEQLLSRSVDSDEEPAPDKQGSPE
LCLLSLVHLAREKSATNNKSAGIQSRRKKILDVYANVCGVVEGLSPTELPFDCLEKTSRM
LSSTYNSEKAVVKTWRHLAESFGLKRDEIGGMTDGMQLFDRISTAGYSIPELLTKLVQIE
RLDAVESLCADILEWAGGAPPTSPPPTAS
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcccacgtggaggactctaggtggacgccctggctccccgtcctggtggcgtccctg
atgtgttcggccggagcagagtactccaactgcggcgaaaacgagtactacaaccagacc
acagggctgtgccaccagtgtcccccctgcgggccaggggaggagccatacatgtcctgt
ggctatggcaccaaagacgaggactacggctgcgtgccctgcccagcagagaagttttcc
aagggaggctaccagatctgcaggcgccacaaagactgcgagggcttcttccgggccaca
gtgctgacaccgggggacatggaaaatgatgccgagtgtgggccgtgtctccctggttac
tacatgttggaaaacaggcccaggaacatctacggcatggtctgctactcctgcctcctg
gctccccccaacaccaaggaatgtgtgggagccactctgggggtttctgccaactccccc
agcacctctggcggcagcaccctgtcccccttccagcatgcccataaagcagaactctcg
agccaaggacacctagccaccgccctgatcatcgccatgtccaccatcttcatcatggcc
atcgccatcgtcctcattatcatgttctacatcatgaagacaaagccttcggccccagcc
tgctgcaccagccccccagggaagagcgtggaagcccccgtgagcaaggacgaggagaag
aaagaggccccagacagtgtggtgattttctctgagaaggatgaatttgagaaactgaca
gcaactccagcaaagaccaccaaaagtgagaatgatgcctcctctgagaacgagcagctg
ctgagccggagcgtggacagtgatgaggagccggcccccgacaagcagggctccccggag
ctgtgcttgctgtcgctggtgcacctggccagggagaagtctgccaccaacaataagtca
gctgggatccaaagcagaaggaaaaaaatattggatgtgtatgccaatgtgtgtggcgtt
gttgaaggtctcagccccacagagctgcccttcgattgcctggagaagaccagccggatg
ctcagctccacatacaactccgagaaggccgttgtgaagacgtggcgccaccttgctgaa
agcttcggactgaagagggacgagattgggggcatgacggatggcatgcagctcttcgac
cgcatcagcacggcgggctacagcatcccagagctgctcacaaaactggtgcagatcgag
cggctggatgcggtggagtccttgtgtgcggacatcctggagtgggcgggcggggcgccg
cccacctccccgccccccactgcatcctga
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