Sciurus carolinensis (gray squirrel): 124967126
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Entry
124967126 CDS
T08117
Name
(RefSeq) nuclear pore glycoprotein p62-like
KO
K14306
nuclear pore complex protein Nup62
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03013
Nucleocytoplasmic transport
ncar05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124967126
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
124967126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124967126
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124967126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
DUF4164
Nup188_C
Motif
Other DBs
NCBI-GeneID:
124967126
NCBI-ProteinID:
XP_047385125
EnsemblRapid:
ENSSCRG00010015507
LinkDB
All DBs
Position
16:complement(58636519..58659473)
Genome browser
AA seq
518 aa
AA seq
DB search
MSGFNFGGTGAPTGGFTFGTAKTVTTTPTTGFSFSASGTGGFNFGTSSQPATTTPSTGLF
SLTTQAPATQTSGFSFGTTPSSGGTGFSLGINAPKLNLSNTTATPATVNPSGFWLGSSTL
TNAISSTVTSSQGAAPTGFVFGSSTTSAAPNTTSGGFSFTGGSTSQTGTSGFNIGSVGSS
AQPTALTGLPFTPATPATTGAGTTQPAAPTPTAATTSVGPTLFASIAAAPTSSTTTGLSL
CAPATTAGAPGAGMLGFSLKAPGAASGASTATSSTTTTTTTTTTGFALSLKPLVPSGIPS
NAAAAVTAPPGTSTAAGAATCPVMTYAQLESLINKWSLELEDQERHFLQQATQVNAWDRT
LIENGEKITSLHREVEKVKLDQKRLDQELDFILSQQKELEDLLSPLEESVKEQSGTIYLQ
HADEEREKTYKLAENIDAQLKRMAQDLKDIIEHLNTSGGPADTSDPLQQICKILNAHMDS
LQWIDQNSALLQRKVEEVTKVCEGRRKEQERSFRITFD
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggtttaattttggaggcactggggctcctacaggagggttcacgtttggcact
gcaaagacagtaacaaccacccctacaacggggttttctttctctgcttcgggcactgga
gggtttaactttgggacttcctcacagccagctacaaccaccccttcaactggcctgttc
tcactcactacccaagctccagcaacacagacctcagggttcagttttggaacaactcct
tcctctggaggtactggcttttccttaggaatcaatgctccaaagctaaatttgagcaac
acaactgccaccccagccacagtgaaccccagtggcttttggcttggcagcagcaccctt
accaatgccatatcgagcaccgtcacctccagccagggggcagcacccactggctttgtg
tttggctcttctaccacctctgcagccccaaacaccacatctggagggttctccttcacc
ggtggaagtacgtcccagactgggacctctggtttcaacattggctccgtgggcagttct
gcccagcccacagcacttactggattacccttcactccagcaacaccagcaaccactgga
gcagggaccacacagccggccgctcccacacccactgctgccaccaccagcgtggggcct
accctctttgcctcaatagcagctgctccgacctcatccaccaccacagggctctccctc
tgtgccccagcaaccactgctggagctcctggagctggtatgctggggtttagcttaaaa
gcccctggagcagcttctggtgcctccacagcaacatcctccaccaccaccaccaccacc
accaccactactggctttgccttgagtttaaaaccactggtgccaagtgggatccccagc
aatgcagcagctgctgtgacagctccacctggcaccagtacagctgctggagcagccacc
tgtcccgtgatgacctatgcgcaactggaaagcctgatcaacaagtggagcctggagttg
gaagaccaggagcggcatttcctccagcaggccacccaggtcaacgcctgggaccgtaca
ctgattgagaatggggagaagatcaccagcctgcaccgtgaggtagagaaggtgaagctg
gaccagaagcggctggaccaagagcttgacttcatcctgtcccaacagaaggagctggaa
gacctgctgagcccactggaggagtcagtcaaggagcagagcgggaccatctacctgcag
catgctgacgaggagcgcgagaagacctacaagctggctgagaatattgacgcacagctg
aagcgcatggcccaggacctgaaggacatcatcgagcacctgaacacatctggaggcccc
gctgacaccagtgaccctctacagcagatctgcaagatcctcaatgcgcacatggactct
ctgcagtggattgaccagaattcagccctgctacagaggaaggtagaagaagtgaccaaa
gtgtgtgaaggacgtcgcaaggagcaggagcgcagcttccgaatcaccttcgactga
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