Sciurus carolinensis (gray squirrel): 124970293
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Entry
124970293 CDS
T08117
Name
(RefSeq) xylosyltransferase 1 isoform X1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ncar00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
ncar01100
Metabolic pathways
Module
ncar_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
124970293
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
124970293
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ncar01003
]
124970293
Enzymes [BR:
ncar01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
124970293
Glycosyltransferases [BR:
ncar01003
]
O-Glycan biosynthesis
Glycosaminoglycan
124970293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
124970293
NCBI-ProteinID:
XP_047389495
EnsemblRapid:
ENSSCRG00010018278
LinkDB
All DBs
Position
18:complement(28629834..28892747)
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AA seq
965 aa
AA seq
DB search
MVAAPCARRLARRSHSALLAALTVLLLQTLVVWNFSSLDSGAGERRGGAAAGGNEQPPPA
PAPRRERRDLPAEPAAARGGGGGGGGGGGGRGGRGPPARARGGGPGEARAQQPASRGALP
GRAQPDPHPSPLITLETQDGYFSHRPKEKVRTDSNNENSVPKDFENVDNSNFAPRTQKQK
HQPESAKKPPGRQKERLQRKLEPQEKGQGQGRPFLGKGPKEALPPRDSAAANSSRGKDAP
RLPHARRSGGSSRETKYDQPPKCDISGKEAISALSRSKSKHCRQEIGETYCRHKLGLLMP
EKVTRFCPLEGKASKNVQWDEDSAEFMPANPVRIAFVLVVHGRASRQLQRVFKAIYHKDH
FYYIHVDKRSNYLHRQVLQFAGQYSNVRVTPWRMATIWGGASLLATYLQSMRDLLEMTDW
PWDFFINLSAADYPIRTNDQLVAFLSRYRDMNFLKSHGRDNARFIRKQGLDRLFLECDAH
MWRLGDRRIPEGIAVDGGSDWFLLNRKFVEYVTFSTDDLVTKMKQFYAYTLLPAESFFHT
VLENSPHCDTMVDNNLRITNWNRKLGCKCQYKHIVDWCGCSPNDFKPQDFHRFQQTARPT
FFARKFEAVVNQEIIGQLDYYLYGNYPAGTPGLRAYWENVYEEPDGVHSLSDVALTLYHA
FARMGLRRAEASLHTDGENSCRYYPMGHPASVHLYFLADRFQGFLVKHHATNLAVSKLET
LETWVMPKKVFKIASPPSDFGRLQFSEVGTDWDAKERLFRNFGGLLGPMDEPVGMQKWGK
GPNVTVTVVWVDPVNVIAATYDILIESAAEFTHYKPPLNLPLRPGVWTVKILHHWVPVAE
TKFLVAPLTFSNRQPIKPEEALKLHHGPPRSAYMEQSFQSLNPVLGLPISPAQLEQAARN
AASTGAALEGWLDSLVGGMWTAMDVCATGPTACPVMQTCSQTAWSSLSPDPKSELGAVKP
DGRLR
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggtggcggcgccgtgcgcccggaggctggcccggcgctcgcactcggcgctgctcgcg
gcgctcaccgtgctgctgctgcagacgctggtcgtgtggaatttcagcagcctcgactcc
ggggccggcgagcgccgcgggggcgcagcggccggcggcaacgagcagccgcccccggcc
ccggccccgcgccgcgagcgccgggacctgcccgccgagccggctgcagcccggggagga
ggcggcggcggcggcggaggaggaggaggacgaggaggacgggggcccccggcgcgggcg
cggggaggcggccccggagaagcccgcgcgcagcagccggccagccgcggggcgctgccc
ggccgggcgcagccggacccgcacccgagcccgctgatcaccctggagacccaggatggc
tacttctctcaccggcccaaagagaaagtgcggaccgacagcaacaacgagaactccgtc
cctaaggattttgagaacgtggacaatagcaacttcgcacccaggacccagaagcagaag
caccagcccgagtctgcgaagaagcccccggggcgacagaaggagcgtttgcagaggaag
ctggagccccaggagaaagggcagggacagggacgtcccttcctggggaaagggcccaag
gaggccctgcctccccgggacagcgccgcagccaacagcagccgagggaaggacgccccc
agactgccccatgccaggaggagcggcggcagctcccgggagaccaaatacgaccagccc
cccaagtgcgacatctccggcaaggaggccatctctgccctgtcccgctccaagtccaag
cactgccgccaggagatcggggagacctactgccgccacaagctgggactgctgatgccc
gagaaggtgactcggttctgccccctggagggcaaagccagcaagaacgtgcagtgggac
gaagactctgcggagttcatgcccgccaacccggtcaggatcgccttcgtcctggtggtg
cacggccgcgcctcccggcagctgcagcgcgtgttcaaggctatctaccacaaggaccac
ttctactacatccacgtggacaagcgctctaattacctgcatcggcaagtgctccagttc
gccgggcagtacagcaacgtccgcgtcaccccctggaggatggccaccatctggggagga
gccagcctcctggccacctacctgcagagcatgcgggaccttctggagatgaccgactgg
ccgtgggacttcttcatcaacctcagcgcagccgactaccccatcaggacgaatgaccag
ctggtggcgtttctctcccgataccgagacatgaatttcctgaagtcacacggccgggac
aatgcaaggttcatccggaaacaaggcctggaccggctcttcctggagtgcgatgcgcac
atgtggcgcctgggcgatcgcaggatccccgagggcatcgcggtggacggcggctccgat
tggttcctgctgaaccggaagttcgtggaatacgtgaccttctccacggacgatctggtg
accaagatgaagcagttctatgcctacacgctgcttcccgccgagtccttcttccacacg
gtcctggagaacagcccccactgcgacaccatggtggacaacaacctgcgcatcaccaac
tggaaccgcaagctgggctgcaagtgtcagtacaagcacatcgtggactggtgcggctgc
tcccccaacgacttcaagccgcaggacttccaccgcttccagcagaccgcccggcccacc
ttctttgcgcgcaagttcgaagcggtggtgaaccaggagatcatcgggcagctggactac
tacctgtacgggaactacccggccggcaccccgggcctgcgcgcctactgggagaacgtg
tacgaggagcccgacggcgtccacagcctgagcgacgtggcgctcacgctgtaccacgcc
ttcgcccgcatggggctgcgcagggccgaggcctcgctgcacacggacggggagaacagc
tgcaggtactacccaatgggccacccggcatctgtccacctctacttccttgccgaccgc
ttccagggctttctggtcaagcaccatgctaccaatctggccgtgagcaaactcgagacc
ctggagacgtgggtgatgccaaagaaagtcttcaagatcgcgagcccccccagtgacttc
gggaggcttcagttttctgaggtcggcactgactgggatgccaaggagcggctgttccgc
aacttcgggggcctcctggggcccatggacgagccagtggggatgcagaagtgggggaag
gggcccaacgtgaccgtgaccgtcgtctgggtggatcccgtcaacgtcatcgcggccacc
tacgacatcctcatcgagtccgctgccgagttcacacactacaagccccctctgaacctg
cccctgaggcccggggtctggacagtgaaaatcctccaccactgggtgccggttgcagag
accaaattccttgtcgcgccgctgaccttctcaaacaggcagcccatcaaaccagaggag
gcattgaagctgcaccacggacccccccgcagtgcctacatggagcagagcttccagagc
ctgaaccccgtcctcggcctgcccatcagccctgcccagctggagcaggccgcccggaac
gccgcctccacgggcgcagcgctggagggctggctggactcgctggtgggcgggatgtgg
accgccatggacgtctgtgccacgggccccaccgcctgcccggtcatgcagacctgcagc
cagacagcctggagctccctcagccccgaccccaagtcagagctgggcgccgtcaaaccc
gacggccggctgaggtag
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