Sciurus carolinensis (gray squirrel): 124970741
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Entry
124970741 CDS
T08117
Name
(RefSeq) serine/arginine repetitive matrix protein 2 isoform X1
KO
K13172
serine/arginine repetitive matrix protein 2
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncar03041
]
124970741
Spliceosome [BR:
ncar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
124970741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cwf21
CTD
Motif
Other DBs
NCBI-GeneID:
124970741
NCBI-ProteinID:
XP_047390221
EnsemblRapid:
ENSSCRG00010016743
LinkDB
All DBs
Position
18:39313497..39331975
Genome browser
AA seq
2740 aa
AA seq
DB search
MYNGIGLPTPRGSGTNGYVQRNLSLVRGRRGERPDYKGEEELRRLEAALVKRPNPDILDH
ERKRRVELRCLELEEMMEEQGYEEQQIQEKVATFRLMLLEKDVNPGGKEETPGQRPAVTE
THQLAELNEKKNERLRAAFGISDSYVDGSSFDPQRRAREAKQPAPEPPKPYSLVRESSSS
RSPTPKQKKKKKKKDRGRRSESSSPRRERKKSSKKKKHRSESESKKRKHRSPTPKSKRKS
KDKKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKIHATALTGQSPSPAP
GRRGEGDAPSSEPGTTSIQRPTSPETSTKQPSSPYEDKDKKEKSAVRPSPSPERSSTGPE
PPAPTPLLAEQHGGSPQPLATTSLSQEPVNPPSEASPTRGPSPPKSPEKPPQSSSSESCP
PSPQPTKVSRHASSSPESPKPTPAPGTRRESSSSPTSKNRSHGRAKRDKSQSHTPSRRMG
RSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGW
SRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPARR
RSRSRTPARRGRSRSRTPARRRSRTRSPARRRSRSRSQARRSGRSRSRTPARRGRSRSRT
PARRSGRSRSRTPARRSGRSRSRTPARRGRSRSRTPARRRSRSRSLVRRGRSHSRTPQRR
GRSGSSSERKNKSRTSQRRSRSNSSPEMKKSHISSRRSRSLSSPRSKAKSRLSLRRSLSG
SSPCPKQKSQTPPRRSRSGSSQPKAKSRTPRRSRSGSSPPKQKSKTPSRQSHSSLSPHPK
VKSGTPLREGSFPSPQANEQSATPQRRSHSESPDPEVKSRTPSRQSCSGSSPPRVKSSTP
PRQTPSRSLSPQPKVKTGSPGRRSHSGSSSPSPSRVTSGTPPRQSRSVSPCTKVESRLLP
RQSHSRSSSPDTKVKPETPPRQSHSGSTSPYPKVKPQTPPGQSQSGSKSPCPQENSKESQ
SQSCSGSFSLCPGVISNTPPGESYFGSSSLQHKGQSQTSPDPRSDTSSPEARQSHLTSPL
LQSKSQTFPKGSGSGSSSPVTELASRSPTRQDGGELSSPRLKSGMSPEQSRPQSDSCPYL
AMDSKSLLGQSRLESSESKEKMGLPLQEDVAALSPRSRDKLCTPVQDRTESSPVLKDTPR
APSRERSGTESSPDTKDQSNTLPKSNQDEELMEVVEKSEKLSSQVLPRLSPELKQMTGSN
FEFSPEIEERPNVSLALDQSQSQTALEEVPAVASCWGGPHFSPEHKELSHSPPRENNFGS
PLEFRNSGTATEMNTGFSPEVKEDLNGPFLNQLETDPSLDVKEQSTRSSRRSSSELSPDV
VEKAGMSSNQSVSSPVLDAVPRTPSRERSSSASSPELKDGLPRTPSRRSRSGSSPGLRDG
SGTPSRHSLSGSSPGMKDIPRTPSRGRSECDSSPEPKALPQTPRPRSRSPSSPEINNKCL
TPQRERSGSESSVEQKTVARTPLGQRSPSGSSQELDGKPSASPQERSESDSSPDSKAKTR
TPLRQRSRSGSSPEIDSKSRASPRRSRSGSSPEVKDKPRAAPRTQSGSDSSPEPKVPAPR
VLPRRSRSGSSSKGREPSPEGSSSSESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRS
SRSSPELTRKARLSRRSRSASSSPETRSRTPPRRRRSPSVSSPEPAEKSRSSRRRRSASS
PRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRV
TRRRRGGSGYHSRSPARQESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRASP
ATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPV
TRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVNRRRSRSRTSPIARRRSRSRTSPVT
RRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAI
RRRSRSRTPRATRGKRSLTRSPPAIRRRSASGSSSDRSRSATPPATRNHSGSRTPPVALN
SSRMSCFSRPSMSPTPLDRCRSPGMLEPLGSARTPMSVLQQAGGSMMDGPGPRIPDHPRT
SVPENHAQSRIALALTAISLGTARPPPSMSAAGLAARMSQVPAPVPLMSLRTAPAANLAS
RIPAASAAAMNLASARTPAIPTAVNLADSRAPAAAAAMNLASPRTAVAPSAVNLADPRTP
TAPAVNLAGARTPAALAALSLSGSGTPPTAANYPSSSRTPQAPAPANLVGPRSAHATAPV
NIASSRTPSALAPASLTSARMAPALSGANLTSPRVPLSAYERVSGRASPPLLDRARSRTP
PSAPSQSRMTSERAPSPASRMIQAPSQSLLPPTQDRPRSPVPSAFSDQSRSNAQTTSVAG
SQSLSSGTVVKAVSSTGDHNGMVSGPTPGVPHPEGGEPPASTGAQQPSALATLQPAKERR
SSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPAQPEVALKRVPSPTPAPKEAVR
EGRPQEPAPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSP
AKPGPQALPKPASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQPSPRDQQ
SSSERVSRRGQRGDSHSPGHKRRRETPSPRPMRHRSSRSP
NT seq
8223 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacgggatcgggctgccgacgccccggggcagcggcaccaacggctacgtccag
cgcaacctgtccctggtgcggggccgccggggtgagcggcctgactacaagggagaggag
gaactgcggcgcctggaggctgccctggtgaagcggcctaatcctgacatcctggaccac
gagcgcaagcggcgcgtggagctgcgatgcctcgagctggaggagatgatggaagagcag
gggtacgaggaacagcaaattcaagagaaagtggcgacctttcgactcatgttgctggag
aaggatgtgaaccctgggggcaaggaagagaccccagggcagaggccagcggtaactgaa
acccatcagttggcagaattgaatgagaagaagaatgagcgactccgtgctgcctttggc
atcagtgattcctatgtggatggcagctcttttgatcctcagcgtcgtgctcgagaagct
aaacaaccagctccagagcctcccaaaccttacagccttgttagggagtccagcagttct
cgctcaccgaccccaaagcaaaagaagaagaaaaagaagaaagatagaggacgcaggtca
gagagcagctctcctcgacgggagagaaaaaagagctcgaagaagaagaagcacaggtca
gaatccgaatctaagaaacgaaagcacaggtctcccactccaaagagtaaacgtaaatct
aaagacaagaagcggaagcggtcacggagtacgacaccagctcccaagagtcgccgggcc
catcggtcaacctctgctgattctgcttcctcctctgatacttctcgcagtcggtctcga
agtgctgcagctaaaatacatgcaaccgctttgactgggcaaagtccttcccctgctcca
gggcgtcgaggggagggagatgcgccttctagtgaaccaggtaccaccagtatacaacgg
cctaccagcccagaaacctctacaaagcagcctagcagtccttatgaggacaaagacaag
aaggagaaatctgcagttcgacctagcccctctccggaaaggagcagcacaggcccagaa
ccacctgctcccaccccgctccttgctgagcagcatggcggctccccacagccccttgca
acaacctccttaagtcaggagccagtgaaccccccatctgaggcctccccaacccggggc
ccttcaccacctaagtctcctgagaaaccacctcagtcttcttcctcagagagctgccca
ccatccccacagcctaccaaagtttctcggcatgccagctcttcccctgaaagtcctaaa
cccactccagctcctgggacgcgccgagagagttcttcttctcccacatccaagaatcgg
tcacatggccgagcaaagcgggataaatcacagtctcataccccttcccgtaggatgggg
agatcacgtagccctgccactgctaagagggggagatcccggtctcgaacccccaccaag
agaggtcattctcgttcccggtcccctcagtggcgtaggtcccgatctgcacagaggtgg
ggaagatctagaagcccccaacggcgtggccgctctagatcccctcagcgaccaggttgg
tccaggagcagaaacacccagagaagaggcaggtctagatcagcaaggcgaggcagatca
cattctagatccccagccaccagaggcagatctcgttctagaacaccagccaggcggggc
aggtcccgctctagaacacctgctagacggagatcacgatccagaacacctgccaggcga
aggtccaggtcaagaacgccagcccgtagaggcaggtctcggtcaagaacacctgctagg
cgcagatctaggacccggtcaccagcacgaaggagatctcgtagtagatcgcaagccagg
agaagtggccgctcacgttctagaaccccagctagacggggtcgctcacgctctaggacc
ccagctaggcgcagtggccgctcacgctctagaaccccagctaggcgcagtggccgctca
cgctctagaaccccagctagaagagggaggtctcggtctagaacaccagcaagacgaaga
tcccgcagtagaagtctagttagacgaggaagatctcactctcggacaccacaaagaaga
ggcaggtctggttcatcatcagagcggaagaacaaatccagaacatctcagaggaggagt
aggtccaactcgagtccagaaatgaaaaaatctcacatttcctccaggcggagcaggtct
ctctcttcaccacgatccaaagcaaaatctcgcttgtctttgaggcggagtctttccggg
tcctctccgtgccctaaacaaaagtcacagacgccacccaggcgcagtcgctctggatca
tcacaacctaaagctaaatctagaacaccaaggcggagtcgttctggttcttcaccacct
aaacagaaatctaaaacaccatcaagacaaagtcattccagtttatctcctcacccaaaa
gtgaaatctggaacaccactacgagaaggttccttcccaagtccccaagccaatgaacaa
tctgcaacaccacaacgacggagccattctgaatcacctgatcctgaggtgaaatctagg
actccttcgaggcaaagctgttctggttcctctcctcctcgagtgaagtctagtacgcct
ccaagacagaccccatctaggtctttgtctccacagcccaaagtgaagacagggtcacca
ggacgaagaagtcattctggctcctcttctccaagtcctagtagggtgacttctggaaca
cctccaaggcaaagcagatcagtgtctccttgcaccaaggtggaatctagattgttgcca
aggcagagccattctagatcctcctcaccagataccaaagtgaaacctgaaacaccacca
agacaaagtcactcagggtctacatcaccataccccaaagtaaagccccaaactccacca
gggcaaagtcagtctgggtcaaaatcaccatgtccccaagaaaactctaaagaatctcaa
tctcagagttgctctggatccttctccctctgcccaggagtaatatctaacacaccaccg
ggagaaagctactttggctcctcatctctgcaacataaaggacaatctcaaacttcacca
gatcccagatctgatacttcaagtccagaagcgagacagagtcacttgacatctccactt
ctgcaaagcaaatctcaaacattcccaaagggcagtgggtcagggtcctcctctccagtc
actgaactggcatctagatcaccaacaagacaagatggaggggaattatcaagtcctagg
ctgaaatcgggaatgtctcctgagcagagcagaccccagtctgactcttgcccatatctt
gcaatggactccaagtctcttctgggacaaagccgattggagtcttctgaatcaaaagag
aaaatgggtttaccccttcaggaggatgttgctgcattgtctcctagatcaagagacaaa
ctttgtacacctgtacaagataggactgaatcctcaccagtactaaaagacacacctaga
gccccatcaagggaaagaagtggcactgaatcatcaccagatacaaaagaccaaagtaat
acattacctaagtcaaaccaagatgaagaattaatggaggtggtagagaaatctgaaaaa
ctttcaagccaagtcctgccccgtttgtctccagaacttaaacaaatgactggaagtaac
tttgaattttctcctgaaatagaagaaaggcctaatgtgtctttagctcttgaccaaagc
cagtcacagactgctttggaagaagttcctgcagtggcctcatgttggggagggccacat
ttttctccagagcataaagaactgtctcactctccccccagggagaataactttggatca
cctttagaatttagaaactcaggcactgctacagaaatgaatactggattttcacctgag
gttaaagaagatttgaatggacctttccttaatcagctggagacagacccatctctagat
gtgaaagaacaatcgacaagatcctccaggcgtagcagttctgagttgtccccagatgtg
gtggaaaaggcaggaatgtcttcaaatcagagtgtgtcttcacctgtacttgatgctgta
cccagaacaccctcaagagagagaagtagttctgcatcttctcctgaactgaaagatggt
ttacccagaactccatcaaggagaagtcggtctgggtcttctccaggacttagagatggt
tctgggactccctccaggcacagcctgtctgggtcttctcctggaatgaaagatatacct
agaaccccatctagggggcgaagtgaatgtgattcttccccagaaccaaaagcattgcct
caaactccaaggccaagaagtcgttctccatcatctccagagatcaacaataagtgtctt
actcctcagagagaaagaagtggatcagaatcatcagttgagcagaaaactgtggctagg
acgcctcttgggcagagaagtccatctggatcgtctcaagagcttgatgggaaacccagt
gcatctcctcaggagagaagtgagtctgattcttctccagattctaaagccaagacacga
accccacttaggcagaggagtcgctctggatcctctccagagattgacagcaaatcccga
gcttctcctcgacgcagtaggtctggatcatctcctgaagtgaaagataagccaagagca
gcacctcggacccagagtggttctgattcctctcctgaacccaaagtacctgctcctcgg
gtccttcccagaagaagcagatcaggttcatcaagcaaaggcagagaaccttctcctgaa
ggaagcagcagttccgagtcctcaccagaacacccacccaaatccagaactgctcgaaga
ggctccaggtcctcgccagagccaaagacaaagtctcgcacaccacctcgacgtcgcagc
tctcggtcatctcctgagctaactagaaaggccagactgtcccgtaggagccgctctgcc
tcctcatcaccagaaacccgctccagaactcctccaagacgccgaagaagtccctctgta
tcttcccctgagccagctgaaaagtctaggtcttctcgtcggcggcgttcagcttcatct
ccacgcactaagacaacttcaaggagaggccgttccccttcaccaaagccacgtggactc
cagaggtcccgttcccgctcacgtagagagaaaaccagaacaacccgtcgacgagacagg
tctggatcgtctcagtcaacttcccgaagaagacagcggagccggtccagatctcgggtc
actcgtaggcgcagggggggctctggttaccactccagatcacctgcccgccaggagagt
tcccgaacttcctctcgacgccgaagaggtcgctctcgaacacccccaaccagtcggaag
cgttctcggtcacgcacatcaccagccccatggaaacgctctagatctcgagcctcccca
gcaacacaccggcgatccaggtctagaacacccttgatcagccgacgtaggtccaggtct
cggacttcccctgtgagtcggagacggtccagatccagaacatcagtgactcgacgaaga
tctcgatcgagagcgtccccagtgagtcgaaggcgatccaggtccaggacacctcctgta
acccgtcgtcgttcaagatccagaacaccaacaacacgccgacgttcccgttctagaact
ccaccagtgactcgcagaaggtcccgatctaggaccccaccagtaaacaggaggcgatct
agaagcagaacttcacctattgctcgcagaaggtcaagatccagaacatccccagtcact
cgaaggcgatctcgatcacgtacatctccagtcactcggagaaggtcccgatctcgaacc
tctccagtgactcgtcgccgttctaggtcccgaacgcctccagctattcgacgccgctct
aggtctcgaacgccattgttgccacgcaaacgttctcgaagccgctcaccacttgctatt
cgccgccgttctaggtcccgtacaccccgtgcaactcggggcaaacggtctttaacaaga
tctcctccggctatccgcaggcgttctgcatctggaagtagttctgatcgttcacgttct
gctactcctccagcaacaaggaatcattctggttctcggacacctccagtggcactcaat
agctccagaatgagctgtttcagccgtcctagcatgtcaccaactcctctcgatcgatgt
agatcacctggaatgcttgaaccccttggcagtgctagaacacccatgtctgtcctgcag
caagctggtggctctatgatggatggcccaggtccccgaatacctgatcatccaagaaca
tctgtgccagaaaatcatgctcagtctagaattgcacttgccttgacagccatcagcctt
ggcactgcccggcctcctccatccatgtctgctgctggtcttgctgcaagaatgtcccag
gtcccagctccggtacctctcatgagtctcagaacggccccagctgccaaccttgctagc
aggattcctgcagcttctgcagcagccatgaacctggccagtgcccggacaccggctatc
ccaacagcagtgaacctagctgactcacgagcaccagctgcagcagcagccatgaacttg
gccagtcccagaacagcggtggcaccttcagccgtgaatcttgctgatcctcggaccccc
acagctccagctgtgaacctagcaggagccagaacccctgctgccttggcagctttgagt
ctttcaggatctggcacgcctccaactgctgcaaattatccctctagctccagaacaccc
caggctccagcccctgcaaaccttgttggtccacgatctgcacatgccacagctcctgtg
aatattgctagctctagaaccccttcagccttggcccctgcaagtctcaccagtgctagg
atggctccagcgttgtctggtgcaaaccttaccagccctagggtgcccctttctgcttat
gagcgtgttagtggcagagcctcacccccacttcttgaccgagccaggtccagaacacca
ccatcagccccaagccagtctagaatgacctctgagcgggctccctcccctgcctctaga
atgatccaggctccttcacagtctcttctccctccaacacaggatagacctaggtctcct
gtgccatctgcattttcagaccaatcgcgttcaaatgcccagaccacttctgtagcaggg
tctcagtccctgtcctctggtacagtggtaaaggccgtgtcctccactggtgaccacaat
ggcatggtttctggccctactcctggggtgcctcaccctgagggtggggaaccacctgcc
tctactggggcccagcagccttctgcattggccaccctgcaaccagcaaaggagcggcgg
agttcctccagctcctccagctcctccagctcctcttcatcatcatcgtcgtcatcgtca
tcatcttcgtcctctggctccagttctagtgactcagagggctctagccttccagctcaa
cctgaggtggcactgaaaagggtccccagccccactccagcaccaaaggaggctgttcga
gagggacgtccccaggagccagccccagccaaacggaagaggcgctctagcagctctagt
tccagctcctcctcttcctcctcctcctcctcctcctcttcttcctcttcctcctcttcc
tcatcctcctcttcctcatcttcttcctcctcctcctcttcttcctcttccccttcccct
gctaagccaggccctcaggccttgcccaaacctgcaagccccaagaagccaccccctggc
gagcggaggtcccgcagcccccggaagcctatagactcccttcgggactcccggtccctc
agctactcacctgtggagcgtcgccgtccctcacctcagccctcaccccgggaccagcag
agcagcagtgagcgggtttcccggagaggccagcgtggggatagccattctccgggccat
aagcgcaggagggagactcctagcccccgtcccatgcgacaccgctcctccaggtctcct
taa
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integrated database retrieval system
