Sciurus carolinensis (gray squirrel): 124979757
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Entry
124979757 CDS
T08117
Name
(RefSeq) integrin beta-6 isoform X1
KO
K06589
integrin beta 6
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04151
PI3K-Akt signaling pathway
ncar04510
Focal adhesion
ncar04512
ECM-receptor interaction
ncar04810
Regulation of actin cytoskeleton
ncar04820
Cytoskeleton in muscle cells
ncar05165
Human papillomavirus infection
ncar05410
Hypertrophic cardiomyopathy
ncar05412
Arrhythmogenic right ventricular cardiomyopathy
ncar05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
124979757
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124979757
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124979757
09142 Cell motility
04820 Cytoskeleton in muscle cells
124979757
04810 Regulation of actin cytoskeleton
124979757
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
124979757
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
124979757
05412 Arrhythmogenic right ventricular cardiomyopathy
124979757
05414 Dilated cardiomyopathy
124979757
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncar04147
]
124979757
04515 Cell adhesion molecules [BR:
ncar04515
]
124979757
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
124979757
Cell adhesion molecules [BR:
ncar04515
]
Integrins
Integrin beta subunits
124979757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
PSI_integrin
I-EGF_1
EGF_2
Fib-H_N
Motif
Other DBs
NCBI-GeneID:
124979757
NCBI-ProteinID:
XP_047400359
EnsemblRapid:
ENSSCRG00010000987
LinkDB
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Position
3:complement(110679910..110801041)
Genome browser
AA seq
787 aa
AA seq
DB search
MGIELLCLFFLFLGRNDRVQGGCAVGGAETCGDCLLIGPQCAWCSQENFTHPSGVGERCD
TPTNLLAKGCQLTFIENPVTHIEILKNKPLSVGRQKNSSDIVQIAPQNLILKLRPGGEQT
LQVHVRQTEDYPVDLYYLMDLSASMDDDLNTIKELGSLLSKEMSKLTSNFRLGFGSFVEK
PVSPFMKTTPEEIANPCSSIPYFCLPTFGFKHILPLTNDAERFNEIVKNQKISANIDTPE
GGFDAIMQAAVCKEKIGWRNDSLHLLVFVSDADSHFGMDSKLAGIVIPNDGLCHLDNKNE
YSMSTVLEYPTIGQLIDKLVQNNMLLIFAVTQEQVHLYENYAKLIPGATVGLLQKDSGNI
LQLIISAYEELRSEVELEVLGDTEGLNLSFTAVCNNGTLFPHQKKCSHMKVGDTASFNVT
VSIPNCERSRRITIKPVGLGDTLEILISPECHCDCQKEVEVNSSKCHNGNGSFQCGVCAC
NPGHMGPHCECGEDMLSTDSCKEAPDHPSCSGRGDCYCGQCICHLSPYGNIYGPYCQCDN
FSCLRHKGLLCGDNGDCDCGECVCRTGWTGEYCNCTTSTDSCVSEDGVLCSGRGDCVCGK
CVCTYPGASGPTCERCPTCGDPCNSKRSCIECHLSADAKAQEECVDKCKLAGATISEEED
FSKDSSVSCSLQGENECLITFLITTDNEGKTIIHSINEKDCPKPPNIPMIMLGVSLAILL
IGVVLLCIWKLLVSFHDRKEVAKFEAERSKAKWQTGTNPLYRGSTSTFKNVTYKHREKQK
VDLTTEG
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggggattgagctgctctgcctgttctttctatttctaggaaggaatgatcgcgtacaa
ggtggctgtgccgtgggaggagcagaaacctgtggagactgcttactcattggacctcag
tgtgcctggtgttcccaggagaattttacgcatccatctggagttggtgaaagatgtgat
accccaacaaatcttttagccaaaggatgtcaattaaccttcatcgaaaaccctgtcacc
catatagaaatccttaaaaataagcctctcagtgtaggcagacagaaaaatagttctgac
attgtccagattgcacctcaaaacttgatacttaaattgagaccaggtggtgaacagact
ctgcaagtgcatgtccgccagaccgaggattaccctgtggacctgtattacctcatggat
ctctccgcctccatggatgatgacctcaacacaatcaaagagctgggctccctgctttcc
aaggagatgtctaaattaactagcaactttagactgggctttggctcttttgtggaaaaa
cccgtctccccttttatgaaaacaacgccagaggaaattgccaacccttgcagtagtatt
ccttacttctgcctacctacatttggattcaagcacattttgcctctgacaaatgatgca
gaaagattcaatgaaattgtgaagaatcagaaaatttctgctaatattgacacacctgaa
ggtggatttgatgcaattatgcaagctgctgtgtgtaaggagaaaatcggctggcggaac
gactcgctccatctcctggtttttgtgagcgatgccgattctcactttggaatggacagc
aagctggcaggcattgtcattcccaacgatgggctctgtcacctggacaacaagaatgag
tactccatgtctactgtcctggaatatccaacaattggacaactcattgataaactggtg
caaaacaacatgttattgatctttgctgtaacccaagaacaagttcacttatatgagaat
tacgcaaaacttataccgggagccaccgtgggactacttcagaaggactccggaaacatt
ctccagctaatcatctcagcttatgaagaactgcggtctgaggtggaactggaggtatta
ggagacacagaaggactcaacctgtccttcacagctgtctgtaacaacggcaccctcttc
ccacaccagaagaaatgctctcacatgaaggtgggagacacagcttcattcaatgtgact
gtgagtattccaaactgtgagagaagcaggcgcattaccataaagcccgtggggctgggg
gacaccctggaaatactcatcagtccggagtgccactgcgactgtcagaaagaagtggaa
gtgaacagctccaaatgccacaatggaaacggctccttccagtgtggggtgtgtgcctgc
aaccccggccacatgggtcctcactgcgagtgtggtgaggacatgctgagcacagattcc
tgcaaggaggcccctgatcatccctcatgcagcggaaggggtgactgctactgtgggcag
tgcatctgccacttgtctccctatggaaacatttatggtccttactgccagtgtgacaat
ttctcctgcctgagacacaaagggctgctctgtggagataacggggactgtgactgtggt
gagtgcgtgtgcaggaccggctggaccggcgaatactgtaactgcacaaccagcacagac
tcatgtgtctctgaggacggagtgctgtgcagcgggcgcggggactgcgtttgcggcaag
tgtgtttgcacataccctggagcctcaggacccacctgtgaacgatgtcctacctgcggt
gacccctgtaactccaagcgaagctgcatcgaatgccacctgtctgcagatgccaaggcc
caagaagagtgtgtggacaaatgcaaactagctggcgcaaccatcagtgaggaagaagat
ttctcaaaggatagttctgtttcctgctctctgcaaggagaaaatgaatgtcttattaca
ttcctaataactacagataacgaggggaaaaccatcattcacagcatcaatgagaaagac
tgtccaaaacctccaaacattcctatgatcatgttgggggtttcactggctattcttctc
atcggggttgtccttctgtgcatttggaagctgctggtatcatttcatgatcggaaagaa
gttgccaaatttgaagcagaacgatcaaaggccaagtggcaaacgggaaccaatccactg
tacagaggctccactagtacttttaaaaatgtaacctataaacacagggaaaaacaaaag
gtggatctcaccacagaaggatag
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integrated database retrieval system