KEGG   Sciurus carolinensis (gray squirrel): 124979757
Entry
124979757         CDS       T08117                                 
Name
(RefSeq) integrin beta-6 isoform X1
  KO
K06589  integrin beta 6
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04151  PI3K-Akt signaling pathway
ncar04510  Focal adhesion
ncar04512  ECM-receptor interaction
ncar04810  Regulation of actin cytoskeleton
ncar04820  Cytoskeleton in muscle cells
ncar05165  Human papillomavirus infection
ncar05410  Hypertrophic cardiomyopathy
ncar05412  Arrhythmogenic right ventricular cardiomyopathy
ncar05414  Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    124979757
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    124979757
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    124979757
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    124979757
   04810 Regulation of actin cytoskeleton
    124979757
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    124979757
  09166 Cardiovascular disease
   05410 Hypertrophic cardiomyopathy
    124979757
   05412 Arrhythmogenic right ventricular cardiomyopathy
    124979757
   05414 Dilated cardiomyopathy
    124979757
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ncar04147]
    124979757
   04515 Cell adhesion molecules [BR:ncar04515]
    124979757
Exosome [BR:ncar04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   124979757
Cell adhesion molecules [BR:ncar04515]
 Integrins
  Integrin beta subunits
   124979757
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt Integrin_B_tail PSI_integrin I-EGF_1 EGF_2 Fib-H_N
Other DBs
NCBI-GeneID: 124979757
NCBI-ProteinID: XP_047400359
EnsemblRapid: ENSSCRG00010000987
LinkDB
Position
3:complement(110679910..110801041)
AA seq 787 aa
MGIELLCLFFLFLGRNDRVQGGCAVGGAETCGDCLLIGPQCAWCSQENFTHPSGVGERCD
TPTNLLAKGCQLTFIENPVTHIEILKNKPLSVGRQKNSSDIVQIAPQNLILKLRPGGEQT
LQVHVRQTEDYPVDLYYLMDLSASMDDDLNTIKELGSLLSKEMSKLTSNFRLGFGSFVEK
PVSPFMKTTPEEIANPCSSIPYFCLPTFGFKHILPLTNDAERFNEIVKNQKISANIDTPE
GGFDAIMQAAVCKEKIGWRNDSLHLLVFVSDADSHFGMDSKLAGIVIPNDGLCHLDNKNE
YSMSTVLEYPTIGQLIDKLVQNNMLLIFAVTQEQVHLYENYAKLIPGATVGLLQKDSGNI
LQLIISAYEELRSEVELEVLGDTEGLNLSFTAVCNNGTLFPHQKKCSHMKVGDTASFNVT
VSIPNCERSRRITIKPVGLGDTLEILISPECHCDCQKEVEVNSSKCHNGNGSFQCGVCAC
NPGHMGPHCECGEDMLSTDSCKEAPDHPSCSGRGDCYCGQCICHLSPYGNIYGPYCQCDN
FSCLRHKGLLCGDNGDCDCGECVCRTGWTGEYCNCTTSTDSCVSEDGVLCSGRGDCVCGK
CVCTYPGASGPTCERCPTCGDPCNSKRSCIECHLSADAKAQEECVDKCKLAGATISEEED
FSKDSSVSCSLQGENECLITFLITTDNEGKTIIHSINEKDCPKPPNIPMIMLGVSLAILL
IGVVLLCIWKLLVSFHDRKEVAKFEAERSKAKWQTGTNPLYRGSTSTFKNVTYKHREKQK
VDLTTEG
NT seq 2364 nt   +upstreamnt  +downstreamnt
atggggattgagctgctctgcctgttctttctatttctaggaaggaatgatcgcgtacaa
ggtggctgtgccgtgggaggagcagaaacctgtggagactgcttactcattggacctcag
tgtgcctggtgttcccaggagaattttacgcatccatctggagttggtgaaagatgtgat
accccaacaaatcttttagccaaaggatgtcaattaaccttcatcgaaaaccctgtcacc
catatagaaatccttaaaaataagcctctcagtgtaggcagacagaaaaatagttctgac
attgtccagattgcacctcaaaacttgatacttaaattgagaccaggtggtgaacagact
ctgcaagtgcatgtccgccagaccgaggattaccctgtggacctgtattacctcatggat
ctctccgcctccatggatgatgacctcaacacaatcaaagagctgggctccctgctttcc
aaggagatgtctaaattaactagcaactttagactgggctttggctcttttgtggaaaaa
cccgtctccccttttatgaaaacaacgccagaggaaattgccaacccttgcagtagtatt
ccttacttctgcctacctacatttggattcaagcacattttgcctctgacaaatgatgca
gaaagattcaatgaaattgtgaagaatcagaaaatttctgctaatattgacacacctgaa
ggtggatttgatgcaattatgcaagctgctgtgtgtaaggagaaaatcggctggcggaac
gactcgctccatctcctggtttttgtgagcgatgccgattctcactttggaatggacagc
aagctggcaggcattgtcattcccaacgatgggctctgtcacctggacaacaagaatgag
tactccatgtctactgtcctggaatatccaacaattggacaactcattgataaactggtg
caaaacaacatgttattgatctttgctgtaacccaagaacaagttcacttatatgagaat
tacgcaaaacttataccgggagccaccgtgggactacttcagaaggactccggaaacatt
ctccagctaatcatctcagcttatgaagaactgcggtctgaggtggaactggaggtatta
ggagacacagaaggactcaacctgtccttcacagctgtctgtaacaacggcaccctcttc
ccacaccagaagaaatgctctcacatgaaggtgggagacacagcttcattcaatgtgact
gtgagtattccaaactgtgagagaagcaggcgcattaccataaagcccgtggggctgggg
gacaccctggaaatactcatcagtccggagtgccactgcgactgtcagaaagaagtggaa
gtgaacagctccaaatgccacaatggaaacggctccttccagtgtggggtgtgtgcctgc
aaccccggccacatgggtcctcactgcgagtgtggtgaggacatgctgagcacagattcc
tgcaaggaggcccctgatcatccctcatgcagcggaaggggtgactgctactgtgggcag
tgcatctgccacttgtctccctatggaaacatttatggtccttactgccagtgtgacaat
ttctcctgcctgagacacaaagggctgctctgtggagataacggggactgtgactgtggt
gagtgcgtgtgcaggaccggctggaccggcgaatactgtaactgcacaaccagcacagac
tcatgtgtctctgaggacggagtgctgtgcagcgggcgcggggactgcgtttgcggcaag
tgtgtttgcacataccctggagcctcaggacccacctgtgaacgatgtcctacctgcggt
gacccctgtaactccaagcgaagctgcatcgaatgccacctgtctgcagatgccaaggcc
caagaagagtgtgtggacaaatgcaaactagctggcgcaaccatcagtgaggaagaagat
ttctcaaaggatagttctgtttcctgctctctgcaaggagaaaatgaatgtcttattaca
ttcctaataactacagataacgaggggaaaaccatcattcacagcatcaatgagaaagac
tgtccaaaacctccaaacattcctatgatcatgttgggggtttcactggctattcttctc
atcggggttgtccttctgtgcatttggaagctgctggtatcatttcatgatcggaaagaa
gttgccaaatttgaagcagaacgatcaaaggccaagtggcaaacgggaaccaatccactg
tacagaggctccactagtacttttaaaaatgtaacctataaacacagggaaaaacaaaag
gtggatctcaccacagaaggatag

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