KEGG   Sciurus carolinensis (gray squirrel): 124980316
Entry
124980316         CDS       T08117                                 
Name
(RefSeq) pleckstrin homology domain-containing family M member 1 isoform X1
  KO
K23282  pleckstrin homology domain-containing family M member 1
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04140  Autophagy - animal
ncar05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    124980316
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    124980316
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ncar04131]
    124980316
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:ncar04990]
    124980316
Membrane trafficking [BR:ncar04131]
 SNARE
  SNARE associated proteins
   Others
    124980316
Domain-containing proteins not elsewhere classified [BR:ncar04990]
 Pleckstrin homology (PH) domain-containing proteins
  Other PH domain-containing proteins
   124980316
SSDB
Motif
Pfam: RH_dom RUN PH DUF2072
Other DBs
NCBI-GeneID: 124980316
NCBI-ProteinID: XP_047401702
EnsemblRapid: ENSSCRG00010001017
LinkDB
Position
3:17803214..17853129
AA seq 1059 aa
MLSVVENGLDPRAAIPVIKKKLVGSVKALQKQYVSLDTVVTSEDGDANTMCSALEAVFIH
GLHAKHIRAEAGGKRKKSAHQKPLPQPVFWSLLKAVTHKHIISELEHLVFVNTDVGRCRA
WLRLALNDGLMECYLKLLLQEQARLCEYYQPTALLRDTEEGEFLLSFLQGLTSLSFELSY
KSAILNEWTLTPLALSGLCPLSELDPLTTSGAELQRKESLDSISHSSGSEDIEVQHSGHK
IRRNRKLTASSLSLDTASSSQLSCSLNSDSCLLQENGSKSPDRSEEPMSYDSDLGTANAD
DSDPSLQEVLSEFSKAQVNSVPTNGPPQKTEIPSLQASLSLASSTHLDFNVPTELLPAQA
SSGSPDGGHKQESLSQAPGIPDVQQPDVTQAVGSTLGQQPPSAVRERSGAVSQGNTQQKA
LEDGTVGLKLVVSSPTSPKSKSWISEDDFYRPTQEQAPEGTPDCSTAASRGTPESRPALC
RHFSQGPRKSSSLGALDKACVPSPGSRKARAAPAQEHKNFRVVHRRQMGLSNPFRGLMKL
GTVARRGAMGIWKELFCELSPLELRLYLSDEERTCVESCSLLRCEAVGPAHSDGRFELVF
SGKKLALRASSQDEAEDWLDRVREALQKVRPQQEDEWVNIQYPDQPEDPTEAPLGGHLSN
SALLPESTVPQGTQFDWTSAQVPEPDAIKESLLYLYVDRTWIPYIFSLSLDSLKCFRVKN
NEKMLSDSHGVETIRDILPDTSLGGPAFFKIITAKAVLKLQAGNAEEAAQWRDLVRKVLS
SYLETAEEAVTLGGSLDENCQEVLKFATRENGFLLQYLVAIPTEKGLDSQGCFCAGCSRQ
IGFSFVRPKLCAFSGLYYCDICHQDDASVIPARIIHNWDLTKRPVCRQALKFLAQIRTQP
LVNLQLVNASLYEHVEQMRLIGRSREQLKLLGDYLGLCRSGALKELSKRLNHRNYLLESP
HKFSVADLQQIADGVYEGFLKALIEFASQHVYHCDLCTQRGFICQICHHHDIIFPFEFDT
TVRCAECKTVFHQSCQAVVKKGCPRCARRRKYQEQSTLT
NT seq 3180 nt   +upstreamnt  +downstreamnt
atgctctcagtggtggagaatggactggacccccgggctgccatcccggtcatcaagaag
aagttggtgggctctgtgaaggcactgcagaagcagtatgtgtccctggacacagtggtc
accagtgaagatggagatgccaacaccatgtgcagtgccttggaggctgtgtttatccac
ggcctgcatgccaagcacattcgcgcggaggctggagggaaaaggaagaaaagtgcccac
cagaagccgctgcctcagcccgtcttctggtccctcctgaaagctgtcactcacaaacac
atcatctcggaattggagcacctggtctttgtcaacacagacgtgggccgctgccgggcc
tggctgcggctggccctcaacgacggcctgatggagtgctacctgaagctgctgctccag
gagcaggcccggctgtgcgagtactatcagcccacggccctgcttcgagacaccgaggag
ggcgaattcctccttagcttcctgcagggactaacatccttgtcctttgaactgtcctat
aagtccgccatcttaaatgaatggacgctcaccccattggccctctctgggctttgccca
ctctctgagcttgaccctctcactacctctggtgcagaactacagcggaaggaatctctg
gattcaatttcccattcctcaggctcagaggacattgaagtccagcactcgggtcataag
atccggcggaataggaagctcactgcctcctccctcagcctggacacagccagttcctcc
cagctgtcctgcagcctaaactccgatagctgcctacttcaagagaatggctccaagagt
ccagaccgttctgaggagcccatgtcctacgattcagacctgggcacagcaaatgctgat
gattccgacccgtctctgcaagaggtgttgtcagaattcagcaaagcccaggtcaactct
gtgccaaccaacggacccccccaaaagacggagatcccctcgctgcaggcctcgctctcc
ctcgcctcaagtacacacctggacttcaatgtgcctacagagctccttcctgcccaagca
tcttcggggagcccagatggtggtcacaagcaggagtcactttcccaggcacctggcatc
ccagatgtgcagcagccagatgtcacccaagctgtggggagcactttaggccagcagccc
cctagcgctgtgagagagaggagtggagcagtcagccaagggaacacccagcagaaggcc
ctggaggacggtacggttggactgaagcttgtggtttcctcccccaccagcccgaaaagc
aagagctggatctctgaagatgacttctaccggcctacccaggagcaagccccggagggc
accccagattgctctacagctgcttctcgagggactccagagtcaaggcctgctctctgc
aggcatttttctcaaggaccgagaaagagctcctccctgggggcattagacaaagcatgt
gtgccttccccaggaagcaggaaagccagggcagcaccagcgcaggagcataagaacttc
cgggtggtgcaccgcaggcagatggggctgtccaacccgttccgtggcctcatgaagctg
ggcacggtggctcggcgaggggccatgggcatctggaaggagctcttctgcgagctctcc
ccgctggagctccgcctctacctgagcgacgaggagcgcacctgtgtggagagctgctcc
ctgctgcgctgtgaggctgtggggccggcccacagtgacgggcgctttgagctggtcttc
tctggcaagaagctggcgctgcgtgcctcctctcaggatgaggctgaggactggctggac
cgggtgcgggaggccctgcagaaggtccggcctcagcaggaggacgaatgggtgaacatc
cagtatccagaccagcctgaggaccccaccgaggctcccctgggtggccacctctctaac
tcagccctgctcccggagtctacagtcccccagggcacacagtttgactggacgtctgcg
caggttcccgagccagatgctatcaaagagtcccttctgtacctgtatgtggacaggacc
tggataccctatattttttccctgtctttggactctcttaaatgcttccgagtgaaaaac
aatgaaaagatgctaagcgacagccatggagtggagaccattcgagacatcctgccagac
acaagcctcgggggcccggcctttttcaaaatcatcacagccaaggcggtgctgaagctg
caggcagggaatgctgaggaggccgcccagtggagggacctggtccgcaaggtcttatca
tcctacttggagacagccgaggaggccgtgacgcttggcgggagtctggatgaaaactgt
caggaggtgctgaagttcgccaccagggagaacggcttcctgttgcagtacctggtggcc
atccccacagagaagggcctggactcccagggctgcttctgtgcaggctgctcccggcag
attggcttctcctttgtgagacccaaactctgtgccttctctggcctctattactgtgac
atctgccaccaagatgatgcttcagtgattccagccaggatcatccacaactgggacctc
accaagcgcccggtctgtcggcaggccctgaagtttctggcgcagatccggacccagccc
ctggtcaacctgcagctggtgaacgcctcgctgtacgagcatgtggagcagatgcgcctc
attggcaggagccgggagcagctgaagcttctcggggattacctgggcctgtgtcgaagt
ggtgccctgaaggagctgagcaagaggctcaaccacaggaattatctcttggagtctccc
cacaagttcagcgtcgctgacctccagcagatcgcagacggggtgtacgaagggttcctc
aaggccctgatcgagtttgcctcccagcacgtctaccactgtgacctgtgcacgcagcgg
ggcttcatctgccagatctgccaccaccatgacatcatcttcccctttgagtttgacacc
acagtcaggtgtgctgagtgcaagactgtcttccaccagagctgccaggctgtggtgaag
aaaggctgcccccgctgtgcccgccggcgcaaataccaggaacagagcactctgacctag

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