Sciurus carolinensis (gray squirrel): 124980316
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Entry
124980316 CDS
T08117
Name
(RefSeq) pleckstrin homology domain-containing family M member 1 isoform X1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04140
Autophagy - animal
ncar05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124980316
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124980316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124980316
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ncar04990
]
124980316
Membrane trafficking [BR:
ncar04131
]
SNARE
SNARE associated proteins
Others
124980316
Domain-containing proteins not elsewhere classified [BR:
ncar04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
124980316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
DUF2072
Motif
Other DBs
NCBI-GeneID:
124980316
NCBI-ProteinID:
XP_047401702
EnsemblRapid:
ENSSCRG00010001017
LinkDB
All DBs
Position
3:17803214..17853129
Genome browser
AA seq
1059 aa
AA seq
DB search
MLSVVENGLDPRAAIPVIKKKLVGSVKALQKQYVSLDTVVTSEDGDANTMCSALEAVFIH
GLHAKHIRAEAGGKRKKSAHQKPLPQPVFWSLLKAVTHKHIISELEHLVFVNTDVGRCRA
WLRLALNDGLMECYLKLLLQEQARLCEYYQPTALLRDTEEGEFLLSFLQGLTSLSFELSY
KSAILNEWTLTPLALSGLCPLSELDPLTTSGAELQRKESLDSISHSSGSEDIEVQHSGHK
IRRNRKLTASSLSLDTASSSQLSCSLNSDSCLLQENGSKSPDRSEEPMSYDSDLGTANAD
DSDPSLQEVLSEFSKAQVNSVPTNGPPQKTEIPSLQASLSLASSTHLDFNVPTELLPAQA
SSGSPDGGHKQESLSQAPGIPDVQQPDVTQAVGSTLGQQPPSAVRERSGAVSQGNTQQKA
LEDGTVGLKLVVSSPTSPKSKSWISEDDFYRPTQEQAPEGTPDCSTAASRGTPESRPALC
RHFSQGPRKSSSLGALDKACVPSPGSRKARAAPAQEHKNFRVVHRRQMGLSNPFRGLMKL
GTVARRGAMGIWKELFCELSPLELRLYLSDEERTCVESCSLLRCEAVGPAHSDGRFELVF
SGKKLALRASSQDEAEDWLDRVREALQKVRPQQEDEWVNIQYPDQPEDPTEAPLGGHLSN
SALLPESTVPQGTQFDWTSAQVPEPDAIKESLLYLYVDRTWIPYIFSLSLDSLKCFRVKN
NEKMLSDSHGVETIRDILPDTSLGGPAFFKIITAKAVLKLQAGNAEEAAQWRDLVRKVLS
SYLETAEEAVTLGGSLDENCQEVLKFATRENGFLLQYLVAIPTEKGLDSQGCFCAGCSRQ
IGFSFVRPKLCAFSGLYYCDICHQDDASVIPARIIHNWDLTKRPVCRQALKFLAQIRTQP
LVNLQLVNASLYEHVEQMRLIGRSREQLKLLGDYLGLCRSGALKELSKRLNHRNYLLESP
HKFSVADLQQIADGVYEGFLKALIEFASQHVYHCDLCTQRGFICQICHHHDIIFPFEFDT
TVRCAECKTVFHQSCQAVVKKGCPRCARRRKYQEQSTLT
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgctctcagtggtggagaatggactggacccccgggctgccatcccggtcatcaagaag
aagttggtgggctctgtgaaggcactgcagaagcagtatgtgtccctggacacagtggtc
accagtgaagatggagatgccaacaccatgtgcagtgccttggaggctgtgtttatccac
ggcctgcatgccaagcacattcgcgcggaggctggagggaaaaggaagaaaagtgcccac
cagaagccgctgcctcagcccgtcttctggtccctcctgaaagctgtcactcacaaacac
atcatctcggaattggagcacctggtctttgtcaacacagacgtgggccgctgccgggcc
tggctgcggctggccctcaacgacggcctgatggagtgctacctgaagctgctgctccag
gagcaggcccggctgtgcgagtactatcagcccacggccctgcttcgagacaccgaggag
ggcgaattcctccttagcttcctgcagggactaacatccttgtcctttgaactgtcctat
aagtccgccatcttaaatgaatggacgctcaccccattggccctctctgggctttgccca
ctctctgagcttgaccctctcactacctctggtgcagaactacagcggaaggaatctctg
gattcaatttcccattcctcaggctcagaggacattgaagtccagcactcgggtcataag
atccggcggaataggaagctcactgcctcctccctcagcctggacacagccagttcctcc
cagctgtcctgcagcctaaactccgatagctgcctacttcaagagaatggctccaagagt
ccagaccgttctgaggagcccatgtcctacgattcagacctgggcacagcaaatgctgat
gattccgacccgtctctgcaagaggtgttgtcagaattcagcaaagcccaggtcaactct
gtgccaaccaacggacccccccaaaagacggagatcccctcgctgcaggcctcgctctcc
ctcgcctcaagtacacacctggacttcaatgtgcctacagagctccttcctgcccaagca
tcttcggggagcccagatggtggtcacaagcaggagtcactttcccaggcacctggcatc
ccagatgtgcagcagccagatgtcacccaagctgtggggagcactttaggccagcagccc
cctagcgctgtgagagagaggagtggagcagtcagccaagggaacacccagcagaaggcc
ctggaggacggtacggttggactgaagcttgtggtttcctcccccaccagcccgaaaagc
aagagctggatctctgaagatgacttctaccggcctacccaggagcaagccccggagggc
accccagattgctctacagctgcttctcgagggactccagagtcaaggcctgctctctgc
aggcatttttctcaaggaccgagaaagagctcctccctgggggcattagacaaagcatgt
gtgccttccccaggaagcaggaaagccagggcagcaccagcgcaggagcataagaacttc
cgggtggtgcaccgcaggcagatggggctgtccaacccgttccgtggcctcatgaagctg
ggcacggtggctcggcgaggggccatgggcatctggaaggagctcttctgcgagctctcc
ccgctggagctccgcctctacctgagcgacgaggagcgcacctgtgtggagagctgctcc
ctgctgcgctgtgaggctgtggggccggcccacagtgacgggcgctttgagctggtcttc
tctggcaagaagctggcgctgcgtgcctcctctcaggatgaggctgaggactggctggac
cgggtgcgggaggccctgcagaaggtccggcctcagcaggaggacgaatgggtgaacatc
cagtatccagaccagcctgaggaccccaccgaggctcccctgggtggccacctctctaac
tcagccctgctcccggagtctacagtcccccagggcacacagtttgactggacgtctgcg
caggttcccgagccagatgctatcaaagagtcccttctgtacctgtatgtggacaggacc
tggataccctatattttttccctgtctttggactctcttaaatgcttccgagtgaaaaac
aatgaaaagatgctaagcgacagccatggagtggagaccattcgagacatcctgccagac
acaagcctcgggggcccggcctttttcaaaatcatcacagccaaggcggtgctgaagctg
caggcagggaatgctgaggaggccgcccagtggagggacctggtccgcaaggtcttatca
tcctacttggagacagccgaggaggccgtgacgcttggcgggagtctggatgaaaactgt
caggaggtgctgaagttcgccaccagggagaacggcttcctgttgcagtacctggtggcc
atccccacagagaagggcctggactcccagggctgcttctgtgcaggctgctcccggcag
attggcttctcctttgtgagacccaaactctgtgccttctctggcctctattactgtgac
atctgccaccaagatgatgcttcagtgattccagccaggatcatccacaactgggacctc
accaagcgcccggtctgtcggcaggccctgaagtttctggcgcagatccggacccagccc
ctggtcaacctgcagctggtgaacgcctcgctgtacgagcatgtggagcagatgcgcctc
attggcaggagccgggagcagctgaagcttctcggggattacctgggcctgtgtcgaagt
ggtgccctgaaggagctgagcaagaggctcaaccacaggaattatctcttggagtctccc
cacaagttcagcgtcgctgacctccagcagatcgcagacggggtgtacgaagggttcctc
aaggccctgatcgagtttgcctcccagcacgtctaccactgtgacctgtgcacgcagcgg
ggcttcatctgccagatctgccaccaccatgacatcatcttcccctttgagtttgacacc
acagtcaggtgtgctgagtgcaagactgtcttccaccagagctgccaggctgtggtgaag
aaaggctgcccccgctgtgcccgccggcgcaaataccaggaacagagcactctgacctag
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