Sciurus carolinensis (gray squirrel): 124982274
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Entry
124982274 CDS
T08117
Name
(RefSeq) ELKS/Rab6-interacting/CAST family member 1 isoform X1
KO
K16072
ELKS/RAB6-interacting/CAST family member 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04064
NF-kappa B signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
124982274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124982274
Membrane trafficking [BR:
ncar04131
]
Exocytosis
Others
Others
124982274
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
124982274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cast
RBD-FIP
Crescentin
GAS
PKcGMP_CC
DUF5486
Motif
Other DBs
NCBI-GeneID:
124982274
NCBI-ProteinID:
XP_047404557
EnsemblRapid:
ENSSCRG00010024368
LinkDB
All DBs
Position
4:65939259..66489595
Genome browser
AA seq
1149 aa
AA seq
DB search
MYGSARSVGKVEPSNQSPGRSPRLPRSPRLGHRRTNSTGGSSGSSVGGGSGKTLSMENIQ
SLNAAYATSGPMYLSDHENVGSETPKSTMTLGRSGGRLPYGVRMTAMGSSPNIASSGVAS
DTIAFGEHHLPPVSMASTVPHSLRQARDNTIMDLQTQLKEVLRENDLLRKDVEVKESKLS
SSMNSIKTFWSPELKKERALRKDEASKITIWKEQYRVVQEENQHMQMTIQALQDELRIQR
DLNQLFQQDSSSRTGEPCVAELTEENFQRLHAEHERQAKELFLLRKTLEEMELRIETQKQ
TLNARDESIKKLLEMLQSKGLSAKATEEDHERTRRLAEAEMHVHHLESLLEQKEKENSML
REEMHRRFENAPDSAKTKALQTVIEMKDSKISSMERGLRDLEEEIQMLKSNGALSTEERE
EEMKQMEVYRSHSKFMKNKVEQLKEELNSKEAQGEELKKRAAGLQAEIGQVKQELSRKDT
ELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNK
KTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKER
VKSLQADTTNTDTALTTLEEALAEKERTIERLKEQRDRDEREKQEEIDNYKKDLKDLKEK
VSLLQGDLSEKEASLLDLKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKMESQLKKA
HEATLEARASPEMNDRIQQLEREIARYKDESSKAQAEVDRLLEILKEVENEKNDKDKKIA
ELERKPVSRKLYPPRQVSVPAPSGGFVWDFLGNLTSRQVKDQNKKVANLKHKEQVEKKKS
AQMLEEARRREDNLNDSSQQLQDSLRKKDDRIEELEEALRESVQITAEREMVLAQEESAR
TNAEKQVEELLMAMEKVKQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMK
QEALLAAISEKDANIALLELSSSKKKTQEEVAALKREKDRLVQQLKQQTQNRMKLMADNY
EDDHFKSSHSSQTNHKPSPDQIIQPLLELDQNRSKLKLYIGHLTALCHDRDPLILRGLTP
PASYNLDDDQAAWENELQKMTQEQLQDELEKGERDNAELQEFANAILQQIADHCPDILEQ
VVNALEESS
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgtatggaagtgctcgctcagttgggaaggtggaaccaagcaaccagagtcctgggcgt
tcacctaggcttccccgttcccctcgcttaggtcatcgtcgaaccaatagtacaggaggg
agttctggaagcagtgttggaggtggcagtgggaaaaccctttcaatggagaatatacaa
tccttaaatgctgcctatgctacatctggccctatgtacttaagtgaccatgaaaatgtg
ggttcagaaacaccaaaaagcaccatgacacttggccgttctgggggacgtctgccttat
ggtgttaggatgactgctatgggcagtagtcccaacatagccagcagtggggttgctagt
gacaccatagcatttggagagcatcacctccctcctgtgagtatggcgtccactgtacct
cactctcttcgtcaggcaagagataacacaatcatggatctgcagacacagctaaaggaa
gtgttaagggaaaatgatctcttgcggaaggatgtggaagtaaaggagagcaaattgagt
tcttcaatgaatagcatcaagaccttctggagcccagagttgaagaaagagcgagccctt
cgaaaagatgaagcttccaaaatcaccatttggaaggaacagtatagagttgtgcaggag
gaaaaccagcacatgcagatgacaatccaggctctccaggatgaattgcggatccagagg
gacctgaatcagttgtttcagcaagacagtagcagtaggacaggcgaaccttgtgtggca
gagctgacagaggagaacttccagaggctgcatgctgaacatgagcggcaggccaaagag
ctgttccttctacgaaagaccctggaggaaatggagctgcgtattgagacacagaagcaa
acactgaatgctcgggatgagtccattaagaagcttctggagatgttacagagcaaaggt
ctttctgccaaggctactgaggaagaccatgagagaacaagacggctggcagaggcagag
atgcacgtccaccacctagaaagccttttggagcagaaggaaaaagagaacagtatgctg
agagaggagatgcaccggaggtttgaaaatgctcccgattctgccaagaccaaggctctg
caaactgttattgagatgaaggattcaaaaatttcctctatggagcgtgggctccgggac
ctggaagaggaaattcagatgctgaaatcaaatggggctttgagtactgaagaacgggag
gaagaaatgaagcaaatggaagtgtatcgcagccattctaaatttatgaaaaacaaggta
gagcaactgaaggaggaactaaattcgaaagaggctcaaggggaggagctgaaaaagaga
gcagctggtcttcaggctgagattggtcaggtgaaacaggagctgtccagaaaagacaca
gaactactagccctacagacaaagctagaaacgctcacaaaccagttctcagacagtaaa
caacacattgaggtgctgaaggagtccttgactgctaaggaacaaagagccgccatcttg
cagactgaggtggatgctctccggttgcgtttggaagaaaaggaaaccatgctgaataag
aagacaaagcaaattcaggatatggctgaggaaaaagggacacaagctggagagatacat
gacctcaaggacatgctggatgtgaaggaacggaaggttaatgttcttcagaagaagatt
gaaaatcttcaagagcaacttagagataaggaaaagcagatgagcagcttgaaagaacga
gtcaaatccttgcaggctgacaccaccaacactgacactgcccttacgactttggaggag
gcccttgcagagaaagagcggacaattgaacgcttaaaggaacagcgggatagagatgag
cgagagaagcaagaggaaattgataactacaaaaaagatcttaaagacttgaaagaaaaa
gttagcctattgcaaggagacctttcagagaaagaggcttcactcttggatctgaaagag
catgcttcttccctggcttcttcaggactgaagaaggactcaaggctcaagacactggag
attgctctggagcagaagaaggaggaatgtctgaaaatggaatcgcagttgaaaaaggca
catgaagcaacattggaagctagagccagtccagagatgaatgaccgaatacagcagtta
gaaagggagattgccaggtacaaagatgaatctagcaaggcccaggcagaagtggaccgc
cttttggaaatcttgaaggaggtggaaaatgagaagaatgataaagataagaagatagct
gaattggaaagaaagccagtctcccgcaaattgtatcctccacgccaggtttctgtccct
gcaccgtcaggggggtttgtttgggacttcctgggaaatctcacctcaaggcaagtgaaa
gaccagaataagaaggtagcaaatctgaagcacaaggaacaggtggagaaaaagaagagc
gcacagatgctagaggaggcccggcggagagaggacaatctcaacgatagctcccagcag
ctacaggacagtctccgtaagaaggatgacaggattgaagaactggaagaagcactgaga
gaaagtgtacagataactgcagagcgggaaatggtgctggcacaagaggaatcagccagg
accaatgctgagaaacaggtggaggagctgttgatggccatggagaaagtaaagcaggaa
ctagagtccatgaaagcaaagctgtcttccactcagcagtctctggcagaaaaggaaact
catttgaccaatcttcgggcagagagaaggaaacacttagaggaagttctggagatgaag
caagaagctcttctggctgccattagtgaaaaagatgccaatatagctcttttagaactt
tcatcctctaagaaaaagacccaagaggaagtggctgcgcttaaacgtgagaaggatcgc
ctggtacagcagctcaaacagcagacacaaaatcgaatgaagctaatggctgacaactac
gaggacgaccacttcaagtcctcccattccagtcaaacgaatcataaaccctccccagac
cagattattcagcccctcttagaacttgaccaaaatagaagcaagttaaagttgtatatt
ggacacctgacagccctctgccatgaccgagaccccctaatccttcgtggactcactcca
ccagcttcctataacttagacgatgaccaggcagcttgggagaatgagctgcagaagatg
acccaggaacagcttcaggatgagttggaaaaaggtgaacgggacaatgcagaactgcag
gagtttgccaatgccattcttcagcagatagcagaccactgccctgacatcctggagcaa
gtggtcaatgcactggaagagtcatcctga
DBGET
integrated database retrieval system
