Sciurus carolinensis (gray squirrel): 124982472
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Entry
124982472 CDS
T08117
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I isoform X1
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04010
MAPK signaling pathway
ncar04020
Calcium signaling pathway
ncar04713
Circadian entrainment
ncar04925
Aldosterone synthesis and secretion
ncar04927
Cortisol synthesis and secretion
ncar04929
GnRH secretion
ncar04934
Cushing syndrome
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124982472
04020 Calcium signaling pathway
124982472
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
124982472
04925 Aldosterone synthesis and secretion
124982472
04927 Cortisol synthesis and secretion
124982472
09159 Environmental adaptation
04713 Circadian entrainment
124982472
09160 Human Diseases
09167 Endocrine and metabolic disease
04934 Cushing syndrome
124982472
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncar04040
]
124982472
Ion channels [BR:
ncar04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
124982472
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
124982472
NCBI-ProteinID:
XP_047405113
EnsemblRapid:
ENSSCRG00010005590
LinkDB
All DBs
Position
4:168130317..168241160
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AA seq
2176 aa
AA seq
DB search
MAESTPPASSSAAAPAPELGITVQPGPQSPPPSPPGLEEPLDGADPEVPHPDLAPVAFFC
LRQTTSPRNWCIKMVCNPWFECVSMLVILLNCVTLGMYQPCDDMDCLSDRCKILQVFDDF
IFIFFAMEMVLKMVALGIFGKKCYLGDTWNRLDFFIVMAGMVEYSLDLQNINLSAIRTVR
VLRPLKAINRVPSMRILVNLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWAGLLRNRCFL
EENFTIQGDVALPPYYQPEEDDEMPFICSLSGDNGIMGCHEIPPLKEQGRECCLSKDDVY
DFGAGRQDLNASGLCVNWNRYYNVCRTGSANPHKGAINFDNIGYAWIVIFQVITLEGWVE
IMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQREHRLMLEQRQRYLS
SSTVASYAEPGDCYEEIFQYVCHILRKAKRRALGLYQALQSRRQALGPGVPAPAKPGPHA
REPRHCKLCPRHSPLDPTPHTLVQPISAMLASDPASCPHCQHEAGRQPSGPGSTDSGQEG
SGCGGSGGGEAEADRDGPRSSEDGASSGLGKEDDEEPVGAVRLCGDLWRETRAKLRGIVD
SKYFNRGIMMAILVNTVSMGIEHHEQPEELTNILEICNVVFTSMFALEMILKLAAFGLFD
YLRNPYNIFDSIIVIISIWEIVGQADGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKT
MDNVATFCMLLMLFIFIFSILGMHIFGCKFSLRTDTGDTVPDRKNFDSLLWAIVTVFQIL
TQEDWNVVLYNGMASTSPWASLYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSYSDE
DQSSSNMEEFDKFQEGLDSSGDPKLYPIPLTPNGHLDPSLPLGGHLGPAGAVGPAPRLSL
QPDPMLVALDSRKSSVMSLGRMSYDQRSLSSSRSSYYGPWGRSGAWASRRSSWNSLKHKP
PSAEHESLLSAERSGARTCEGARDEGPPRTAPLHAPHAHHAHHGPHLAHRHRHHRRTLSL
DTRDSVDLAELVPALGVHPRAAWRAAGPAPGHEDCNGRMPSIAKDVFTKMDDRRDRGEDE
EEMDYTLCFRVRKMIDVYKPDWCEVREDWSVYLFSPENRFRVLCQTIIAHRLFDYVVLAF
IFLNCITIALERPQIEAGSTERIFLTVSNYIFTAIFVGEMTLKVVSLGLYFGEQAYLRSS
WNVLDGFLVFVSIIDIVVSLASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETL
ISSLKPIGNIVLICCAFFVIFGILGVQLFKGKFYHCLGVDTRNITNRSDCVAANYRWVHH
KYNFDNLGQALMSLFVLASKDGWVNIMYNGLDAVAVDQQPVTNHNPWMLLYFISFLLIVS
FFVLNMFVGVVVENFHKCRQHQEAEEARRREEKRLRRLEKKRRKAQRLPYYATYCHTRLL
IHSMCTSHHLDIFITFVICLNVVTMSLEHYNQPTSLETALKYCNYMFTTVFVLEAVLKLV
AFGLRRFFKDRWNQLDLAIVLLSVMGITLEEIEINAALPINPTIIRIMRVLRIARVLKLL
KMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLVCNDENPCEGMSRHA
TFENFGMAFLTLFQVSTGDNWNGIMKDTLRDCTQDERSCLSSLQFVSPLYFVSFVLTAQF
VLINVVVAVLMKHLDDSNKEAQEDAEMDAEIELEMAHGLGPSPRPPPSSPGGPGRGPGGA
GGGGDPEGRLCRRCYSPAQENLWLDSVSLIIKDSLEGELTIIDNLSGSIFHHYSSPAGCE
KCHHDKQEVVQLAETEAFSLNSDRSSSILLGDDLSLEDPTACPPGPKDSKGELDAPEPTR
VGDLGDCFFPLSHTAVSTGAENFLCEMEATPFNPVRSWLKHESSQDASSPLLTMPAEFFH
PAVSASQKGQEKGAGAGTLPKIALQGSWASLRSPSVNCTFLRQATVSDTSLDASPSSSAG
SLQTTLEDSLTLSDSPRRALGPPVPAAGPRAGLSPATRRRLSLRGRGLFSLRGLRAHQRS
HSSGGSTSPGCTLHDSMDPSDEEGRGGAGGGGAGSEHSETLSSLSLTSLFCPPPAPPPPG
LTPARKFSSTSSLAARPAPRAALARGLARSPSWAADRSKDPPRRAQPAPGLGPAAPEPQP
PPGELEAADAASKRKR
NT seq
6531 nt
NT seq
+upstream
nt +downstream
nt
atggctgagagcaccccgccagcctcctcttctgcagcagcgccagcccctgagctggga
ataacagtgcagccggggccgcagagccccccgccgtccccgccaggcctggaggagccc
ctggatggagctgatcctgaagtcccccatcccgacctggcgccagttgccttcttctgc
ctgcgacagaccaccagcccccggaactggtgcatcaagatggtgtgtaacccgtggttc
gagtgtgtgagcatgctggtgatcctgctcaactgcgtgacgctcggcatgtaccagccc
tgtgacgacatggactgcctgtctgaccgctgcaagatcctgcaggtcttcgacgacttc
atcttcatcttcttcgccatggagatggtgctcaagatggtggccctgggcatttttggc
aagaagtgctacctgggggacacctggaaccgcctggacttcttcattgtcatggcaggg
atggtcgagtactctctggaccttcagaacatcaacctgtcggccatccgcactgtgcgc
gtcctgaggcccctcaaagccatcaaccgcgtgccgagcatgcggatcctggtgaacctg
ctgctggacacgctgcccatgctggggaacgtcctcctgctctgcttcttcgtcttcttc
atcttcggcatcatcggcgtgcagctctgggcgggcctgctgcgcaaccgctgcttcctg
gaggagaacttcaccatacaaggggacgtggccctgcccccctactaccagccggaagaa
gatgacgagatgcccttcatctgctcgctgtcgggggacaatggcatcatgggctgccac
gagatccccccactcaaggagcagggccgggagtgctgcctgtccaaggacgacgtctac
gacttcggggcggggcgccaggacctcaacgccagcggcctctgtgtcaactggaaccgc
tactacaacgtgtgccgcacgggcagcgccaacccccacaagggcgccatcaactttgac
aacatcggttacgcctggatcgtcatcttccaggtgatcacgctggagggctgggtggag
atcatgtactacgtgatggacgcccactccttctacaacttcatctacttcatcctgctc
atcatagtgggctccttcttcatgatcaacctgtgcctcgttgtcatagcgacccagttc
tcggagaccaagcagcgggagcaccggctgatgctggagcagcggcagcgctacctgtcc
tccagcacagtggccagctacgccgagccgggcgactgctacgaggagatcttccagtac
gtctgccacatcctgcgcaaggccaagcggcgagcgctgggcctctaccaggccctgcag
agccggcgccaggccctgggcccaggggtacctgcccctgccaagcccgggccccacgcc
agggagcccaggcactgcaagctgtgcccgagacacagccccctggacccaacgccccac
acgctggtgcagcccatctctgccatgctggcctccgaccctgccagctgcccacactgc
cagcacgaggcaggccggcagccctcgggccccggcagcactgactcgggccaggagggc
tcgggctgcgggggctccggtggcggtgaggctgaagccgaccgggacgggccccggagc
agcgaggacggggcctcctcaggcctggggaaagaggacgacgaggagccggtgggggca
gtccggctgtgtggggacctgtggcgggagactcgggccaagctgcggggcattgtggac
agcaagtacttcaaccggggcatcatgatggccatcctggtcaacaccgtcagcatgggc
atcgagcaccacgaacagcccgaggagctgaccaacatcctggagatctgcaacgtggtc
ttcaccagcatgttcgccctggagatgatcctgaagctcgctgcctttggactctttgac
tacctgcgaaacccctacaacatcttcgacagcatcatcgtcatcatcagcatctgggag
atcgtggggcaggcagacggcgggctgtcggtgctgcgcaccttccggctgctgcgggtg
ctgaagctggtgcgtttcatgcctgcgctgcggcgccagctcgtggtgctcatgaagacc
atggacaacgtggccaccttctgcatgctgctcatgctcttcatcttcatcttcagcatc
ctcgggatgcacatctttggctgcaagttcagcctccgcacagacacgggagacacggtt
cccgacaggaagaactttgactccctgctctgggccattgtcacggtgttccagatcctc
acccaggaggactggaacgtcgtcctctacaatggcatggcctccacctccccctgggcc
tccctctactttgttgctctcatgaccttcggcaactatgtgcttttcaacctgctggtg
gccatcctggtggagggtttccaggctgagggggacgccaaccgctcctactcagatgag
gaccagagctcgtccaacatggaggagttcgacaagttccaggagggcctggacagcagc
ggagatcccaagctctatccaattcccctgacccccaatgggcacctggaccccagtctt
ccactgggtgggcacctgggtcctgctggggctgtgggccctgcaccccgcctctcgctg
cagccagaccccatgctggtggccttggattcccgcaagagcagcgtcatgtccctgggg
aggatgagctatgatcagcgctccctgtccagctcccggagctcctactacggaccttgg
ggccgcagcggggcctgggccagccgccgctccagctggaacagtctcaagcacaagccg
ccctcggctgagcacgagtctctgctctcggcggagcgcagcggcgcgcggacctgcgag
ggcgcccgggacgaggggccgccgcgcactgcgccgctgcacgccccgcacgcccaccac
gcgcaccatggaccccacctggcgcaccgccaccgccaccaccgccggacgctgtccctc
gacaccagggactcagtggacctggccgagttggtgcccgccctgggcgtccacccgagg
gccgcctggagggcagcgggcccggcccccgggcacgaagactgcaacggcaggatgccc
agcatcgccaaggacgtcttcaccaagatggacgaccgccgggatcgcggagaggacgag
gaggagatggactacactctgtgtttccgcgtccgcaagatgatcgacgtctacaagcct
gactggtgcgaggttcgcgaggactggtcggtctacctcttctcccccgagaacaggttc
cgcgtcctgtgtcagaccatcattgcccacaggctcttcgactatgtggtcctggccttc
atcttcctcaactgcatcaccatcgccctggagcggccccagatcgaggctggcagcact
gaacgcatcttcctcacggtgtccaactacatcttcacagccatcttcgtgggcgagatg
acactgaaggtggtctcgctgggcctgtactttggcgagcaggcgtacctgcgcagcagc
tggaacgtgctggacggcttcctggttttcgtgtccatcatcgacatcgtggtgtccttg
gcctcggccgggggagccaagatcctgggggtcctccgggtcctgaggctcctgcgcacc
ctccgccccctgcgtgtcatcagcagggcccctggcctgaagctggtggtggagacgctc
atctcctccctcaagcctatcgggaacatcgtcctcatctgctgcgccttctttgtcatc
tttggcatcctgggggtgcagctcttcaagggcaagttctaccactgcctgggtgtggac
acccgcaacatcaccaaccgctccgactgcgtggctgccaactaccgctgggtccatcac
aaatacaactttgataacctgggccaggcgctgatgtccctctttgtcctggcctccaag
gacggctgggtgaacatcatgtacaacgggctggatgctgtggctgtggaccagcagcct
gtgaccaaccacaacccctggatgctgctgtacttcatctccttcctgctcatcgtcagc
ttcttcgtgctcaacatgttcgtgggtgtggtggtggagaacttccacaagtgccggcag
caccaggaggccgaggaggcccggcggcgcgaggagaagcggctgcggcgcctggagaag
aagcgccgcaaggcccagaggctgccctactatgccacctactgtcacacgcggctgctc
attcactccatgtgcaccagccaccacctggacatcttcatcacctttgtcatctgcctc
aatgtggtcaccatgtccctggagcactacaaccagcccacgtccctggagacagctctc
aagtactgcaactacatgttcaccactgtctttgtgctggaggctgtgctgaagctggtg
gcatttggtctgaggcgcttcttcaaggaccggtggaaccagctggacctggccatcgtg
ctgctctctgtcatgggtatcacgctggaagagattgagatcaacgcagcgctgcccatc
aaccccaccatcatccgcatcatgcgggttctgcgcatcgcccgggtgctgaagctgctg
aagatggccactggaatgcgggccctgctggacaccgtggtgcaggctctgccccaggtg
ggcaacctgggcctcctcttcatgctgctcttcttcatctacgctgccctgggagtggag
ctcttcgggaagctggtctgcaacgacgagaacccgtgcgagggcatgagccggcacgcg
accttcgagaacttcggcatggccttcctcacactcttccaggtctccacgggtgacaac
tggaacgggatcatgaaggacacgctacgggactgcacccaggacgagcgcagctgcctg
agcagcctgcagttcgtgtccccgctgtacttcgtcagcttcgtgctgaccgcgcagttc
gtgctcatcaacgtggtggtggccgtgctcatgaaacacctggacgacagcaacaaggag
gcgcaggaggacgccgagatggacgccgagatcgagctggagatggcgcacggcctgggc
cccagcccgaggccgccccccagctccccgggaggcccgggccgagggccaggaggggcg
ggcggcgggggtgaccctgagggccgcctatgccggcgctgctactccccagcccaggag
aacctgtggctggacagcgtctctttaatcatcaaggactccttggagggggagctgacc
atcatcgacaacctgtccggctccatcttccaccactactcctcgcccgccggctgcgag
aagtgtcaccatgacaagcaggaggtagtgcagctggctgagacagaggccttctccctc
aactcagaccggtcctcgtccatcctgctgggtgacgacctgagtcttgaggaccccacg
gcctgcccgcctggtcccaaagacagcaagggtgagctggacgcgcccgagcccacgcgg
gtgggggacctgggcgactgcttcttccccttgtcccacacggccgtgtccacgggcgca
gagaacttcctgtgcgagatggaggcaaccccattcaaccctgtccggtcctggctgaaa
cacgagagcagccaagacgcctccagcccactcctgaccatgcctgccgagttcttccac
ccagctgtgtctgccagccagaaagggcaggagaagggtgctggcgctgggaccctcccc
aagattgccctgcagggctcctgggcatctctgcggtcaccaagtgtcaactgtaccttc
ctccggcaggccactgtgagtgacacgtcgctggacgccagccccagcagctcggcgggc
agcctgcagaccacgctggaggacagcctgaccctgagcgacagtccccggcgcgcgctg
gggccgcccgttccggccgcggggccgcgggctggcctgtcgcccgccacgcgccggcgg
ctgagcctgcggggccgcgggctgttcagcctgcgcgggctgcgggcgcaccagcgcagc
cacagcagcgggggctccaccagcccgggctgcaccctgcacgactccatggacccgtcg
gacgaggagggccgcggcggcgcgggcggcggcggcgcgggcagcgagcactcggagacg
ctcagcagcctgtcgctcacgtcgctcttctgcccgccgcccgcgccgccgccgcccggc
ctcacgcccgcgcgcaagttcagcagcaccagcagcctggccgcgcgccccgcgccccgc
gccgcgctcgcccgcggcctggcgcgcagcccctcgtgggccgcggaccgcagcaaggac
ccgccgcgccgggcgcagcccgccccgggcctcggccccgcggcgcccgaaccgcagccg
ccgcccggggagctggaggcggcggacgcggcgagcaagaggaagagatga
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integrated database retrieval system
