Sciurus carolinensis (gray squirrel): 124986669
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Entry
124986669 CDS
T08117
Name
(RefSeq) succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial
KO
K00234
succinate dehydrogenase (ubiquinone) flavoprotein subunit [EC:
1.3.5.1
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00020
Citrate cycle (TCA cycle)
ncar00190
Oxidative phosphorylation
ncar01100
Metabolic pathways
ncar01200
Carbon metabolism
ncar04714
Thermogenesis
ncar04932
Non-alcoholic fatty liver disease
ncar05010
Alzheimer disease
ncar05012
Parkinson disease
ncar05014
Amyotrophic lateral sclerosis
ncar05016
Huntington disease
ncar05020
Prion disease
ncar05022
Pathways of neurodegeneration - multiple diseases
ncar05208
Chemical carcinogenesis - reactive oxygen species
ncar05415
Diabetic cardiomyopathy
Module
ncar_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ncar_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ncar_M00148
Succinate dehydrogenase (ubiquinone)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
124986669
09102 Energy metabolism
00190 Oxidative phosphorylation
124986669
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
124986669
09160 Human Diseases
09161 Cancer: overview
05208 Chemical carcinogenesis - reactive oxygen species
124986669
09164 Neurodegenerative disease
05010 Alzheimer disease
124986669
05012 Parkinson disease
124986669
05014 Amyotrophic lateral sclerosis
124986669
05016 Huntington disease
124986669
05020 Prion disease
124986669
05022 Pathways of neurodegeneration - multiple diseases
124986669
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
124986669
09167 Endocrine and metabolic disease
04932 Non-alcoholic fatty liver disease
124986669
Enzymes [BR:
ncar01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
124986669
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Thi4
Pyr_redox_2
GIDA
DAO
FAD_binding_3
HI0933_like
Motif
Other DBs
NCBI-GeneID:
124986669
NCBI-ProteinID:
XP_047411186
EnsemblRapid:
ENSSCRG00010020527
LinkDB
All DBs
Position
6:307219..331891
Genome browser
AA seq
664 aa
AA seq
DB search
MAGVEAVSRLLRARRLVLTRAWPPALPAWTRGVHFTVDGRKRASAKVSDSISTQYPVVDH
EFDAVVVGAGGAGLRAAFGLSEAGFNTACLTKLFPTRSHTVAAQGGINAALGNMEEDNWR
WHFYDTVKGSDWLGDQDAIHYMTEQAPASVVELENYGMPFSRTEDGRIYQRAFGGQSLKF
GKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMESGECRGVIALCIE
DGSIHRIRAKNTVIATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGI
YGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPE
KDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQ
VLKHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIAQSCRPGDK
VPPIKPNAGEESVSNLDRLRFADGSIRTSELRLSMQKSMQSHAAVFRVGSVLQEGCEKIS
QLYGDLKHLKTFDRGVVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVR
IDEYDYSKPIEGQQKKPFGEHWRKHTLSYVDVKTGKVTLEYRPVIDKTLNEADCATVPPA
IRSY
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggttgaggcggtgtcgcggcttctccgtgctaggcgcctggtgctgacccgg
gcgtggcccccagccctcccagcatggacccgcggtgttcacttcactgttgatggaagg
aagagggcatctgctaaagtttcagattcgatttctactcaatacccagtggtggatcat
gaatttgatgcagtggtggtaggtgctggaggggcaggcttgcgagctgcatttggcctt
tctgaggcagggtttaataccgcatgcctcacgaagctctttcctacccggtcacacact
gttgcagcacaggggggaatcaatgctgctctggggaacatggaggaggacaactggagg
tggcatttctacgacaccgtgaagggctccgactggctgggggaccaggatgccatccat
tacatgacggagcaggcccctgcctccgtggtcgagctagaaaattatggcatgccattt
agcagaacagaagacgggaggatttatcagcgtgcatttggtggacagagcctcaagttt
gggaaaggtgggcaggcccatcggtgctgctgcgtagctgatcggaccggccactcactc
ctgcacaccttgtatggaaggtctctgcgatacgacaccagctactttgtggagtacttt
gccctggacctcctgatggagagcggggagtgccgcggagtcatcgcactgtgcatagag
gacgggtccatacatcgcatacgtgccaagaacactgtcattgccactggagggtacggg
aggacctacttcagctgcacctctgcacacaccagcactggggacggcacagccatgatc
accagggctggccttccctgccaggacttggagttcgtgcagttccaccccacaggcata
tatggcgctggctgtctcattacggaaggatgccggggagaaggaggcatcctcattaac
agtcagggcgagaggttcatggagaggtacgcccctgtcgcaaaggacctggcgtccagg
gacgtggtgtctcggtccatgacgctggagatccgtgaaggaagaggctgtggccccgag
aaggaccacgtctaccttcagttgcaccatctgccccctgagcagctggccacacgcttg
cctggcatttcagagacagccatgatcttcgctggtgtggatgtcaccaaggagccaatt
cctgtcctccccactgtgcattacaacatgggtgggattcccaccaactacaaggggcag
gtgctgaagcatgtgaatggccaggatcagattgtgcccggcctgtatgcctgcggggag
gctgcctgtgcctccgtgcacggcgccaaccggctgggggcaaactccctcttggacctg
gtggtcttcggccgggcctgtgccctgagtatcgcacagtcttgcaggcctggagataaa
gttcctccaatcaaaccaaatgctggggaagagtctgtctcaaatctcgacaggctaaga
tttgctgacgggagcataagaacctcggagctgcgcctcagcatgcagaagtccatgcag
agtcatgctgccgtgttccgtgtggggagcgtgttgcaggagggctgcgagaagatcagt
cagctttatggagacctgaagcacttgaagacatttgacaggggagtggtctggaacacg
gatctggtggagaccctggagctgcagaacctgatgctgtgcgctctgcagaccatctat
ggagcagaggcgaggaaggagtctcgcggtgctcacgccagggaagattacaaggtgcgg
attgacgaatatgactactccaagcccattgaggggcagcagaagaagccatttggggag
cattggaggaagcacaccctttcatatgtggatgtcaagactggaaaggtcactctggag
tacagaccggtcatcgacaagaccttaaacgaggctgactgcgccaccgtgccccctgcc
attcgctcctactga
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