KEGG   Sciurus carolinensis (gray squirrel): 124986940
Entry
124986940         CDS       T08117                                 
Name
(RefSeq) glutamate receptor 1 isoform X1
  KO
K05197  glutamate receptor 1
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04024  cAMP signaling pathway
ncar04080  Neuroactive ligand-receptor interaction
ncar04713  Circadian entrainment
ncar04720  Long-term potentiation
ncar04723  Retrograde endocannabinoid signaling
ncar04724  Glutamatergic synapse
ncar04728  Dopaminergic synapse
ncar04730  Long-term depression
ncar05014  Amyotrophic lateral sclerosis
ncar05016  Huntington disease
ncar05017  Spinocerebellar ataxia
ncar05022  Pathways of neurodegeneration - multiple diseases
ncar05031  Amphetamine addiction
ncar05033  Nicotine addiction
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04024 cAMP signaling pathway
    124986940
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    124986940
 09150 Organismal Systems
  09156 Nervous system
   04724 Glutamatergic synapse
    124986940
   04728 Dopaminergic synapse
    124986940
   04720 Long-term potentiation
    124986940
   04730 Long-term depression
    124986940
   04723 Retrograde endocannabinoid signaling
    124986940
  09159 Environmental adaptation
   04713 Circadian entrainment
    124986940
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    124986940
   05016 Huntington disease
    124986940
   05017 Spinocerebellar ataxia
    124986940
   05022 Pathways of neurodegeneration - multiple diseases
    124986940
  09165 Substance dependence
   05031 Amphetamine addiction
    124986940
   05033 Nicotine addiction
    124986940
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ncar04040]
    124986940
Ion channels [BR:ncar04040]
 Ligand-gated channels
  Glutamate (ionotropic)
   124986940
SSDB
Motif
Pfam: ANF_receptor Lig_chan Lig_chan-Glu_bd SBP_bac_3 DUF659
Other DBs
NCBI-GeneID: 124986940
NCBI-ProteinID: XP_047411744
EnsemblRapid: ENSSCRG00010012896
LinkDB
Position
6:142355663..142667479
AA seq 906 aa
MQHIFAFFCTGFLGAVVGANFPNNIQIGGLFPNQQSQEHAAFRFALSQLTEPPKLLPQID
IVNISDSFEMTYRFCSQFSKGVYAIFGFYERRTVNMLTSFCGALHVCFITPSFPVDTSNQ
FVLQLRPELQDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQVTAVNILTT
TEEGYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGFMDIDL
NKFKESGANVTGFQLVNYTDTVPAKIMQQWKSSDARDHTRVDWKRPKYTSALTYDGVKVM
AEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFNEKGR
RTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSSVQNRTYIVTTILEDPYV
MLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGMVGE
LVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIW
MCIVFAYIGVSVVLFLVSRFSPYEWHSEEFEEGRDQTTSDQANEFGIFNSLWFSLGAFMQ
QGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIA
YGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLES
TMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRGPVNLAVLKLSEQGVLDKLKSKW
WYDKGECGSKDSGSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIEFCYKSRSESKRMK
GFCLIPQQSINEAIRTSTLPRNSGAGASGSGSGENGRVVSHDFPKSMQSIPCMSHSSGMP
LGATGL
NT seq 2721 nt   +upstreamnt  +downstreamnt
atgcagcacatctttgccttcttctgcaccggtttcctaggcgcggtagtaggtgccaat
ttccccaacaacatccagatcgggggattatttccaaaccagcagtcacaggaacatgcc
gcttttagatttgctttgtcgcaactcacagagcccccaaaactgctcccccagattgat
attgtgaacatcagcgacagctttgagatgacctatagattctgttcccagttctccaaa
ggagtctacgccatcttcgggttctatgaacgaaggactgtcaatatgctgacctccttt
tgcggggccctccacgtgtgcttcattacgccgagctttcccgtcgacacatccaatcag
tttgtcctccagctgcgccctgaactgcaggatgccctcatcagcatcattgaccattac
aagtggcagaaatttgtctacatttatgatgccgaccggggtttatccgtcctgcagaaa
gtcctggacacagctgcagagaagaactggcaggtgacagcagttaacattttgacaacc
acagaggaaggataccggatgctttttcaggatctggagaagaaaaaggagcgtctggtg
gtggtggactgtgaatcagagcgcctcaatgccatcctgggccagattataaagctagag
aagaatggcattggctaccactacattcttgcaaatttgggcttcatggacattgactta
aataaattcaaggagagtggcgcaaacgtgacaggtttccagttggtgaactacacggac
accgtccctgccaagatcatgcagcagtggaagagcagcgatgctcgggaccacacccgg
gtggactggaagaggcctaagtacacctctgctctcacctacgacggggtgaaagtgatg
gctgaggctttccagagcctgcggagacagaggattgatatatcccggcgagggaatgct
ggcgactgcctggccaacccagcagtgccctggggccaggggatcgacattcagagagcc
ctacagcaggtgcggtttgaaggtttgacaggcaacgtgcagttcaatgaaaaaggacgc
aggaccaactacactctccatgtgatcgaaatgaaacacgatggcatccgaaaaattggt
tactggaatgaagatgataagtttgtccctgcagctactgatgctcaagctgggggagat
aactccagtgttcagaacagaacgtacatcgtcactacaatcctcgaagatccgtatgtg
atgctcaagaagaatgccaaccagtttgagggcaatgaccgctatgagggctactgtgta
gagctggcagccgagattgccaagcacgtgggctactcttatcgtctagagatcgtcagc
gatggaaaatacggagcacgggatccggacacaaaggcctggaacggcatggtgggagag
ctggtctatggaagagctgatgtggctgtggcccccttaactatcaccttagttcgggaa
gaggttatagacttctccaagccatttatgagtttgggaatctccatcatgattaaaaaa
ccacagaagtccaagccaggagtcttctccttcctcgatcctttggcttatgagatttgg
atgtgcatcgttttcgcctacatcggagtgagcgtcgtcctcttcctggtcagccgcttc
agcccctacgaatggcacagcgaagagtttgaggaaggacgagaccagacaaccagcgac
caggcgaatgagtttgggatattcaacagcttgtggttctccctgggagccttcatgcag
caaggatgtgacatttctcccaggtccctgtccggccgcatcgttggtggcgtctggtgg
ttcttcaccttgatcatcatctcctcatacacagccaacttggctgccttcctgaccgtg
gagaggatggtgtctcccattgagagtgcagaggacctagcaaagcagacagaaattgct
tacgggaccctggaagcaggatctactaaggaattcttcaggaggtctaaaattgccgtg
ttcgagaagatgtggacgtacatgaagtcagcagaaccgtccgtttttgtgcggaccacg
gaggaagggatgatccgagtgaggaagtccaagggcaaatacgcctacctcctggagtcc
accatgaatgagtacattgagcagcggaaaccctgcgacaccatgaaagtgggaggtaac
ttggattccaaaggctatggcattgcgacacccaaggggtccgccctgagaggtcccgta
aacctagcggttttgaaactcagtgagcaaggcgtcttagacaagctgaaaagcaaatgg
tggtacgataaaggggaatgtggaagcaaggactccggaagtaaggacaagacaagcgct
ctgagcctcagcaatgtggcgggcgtgttctacatcctgatcggaggacttggactagcc
atgctggttgccttaatcgagttctgctacaaatcccgtagtgaatccaagcggatgaag
ggtttctgtttgatcccacagcaatccatcaatgaagccatacggacatcgacccttccc
cgaaacagtggggcaggagccagcggcagcggcagcggagagaatggtcgggtggtcagc
catgacttccccaagtccatgcaatccattccctgcatgagccacagttcagggatgccc
ttgggagccacgggattgtaa

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