Sciurus carolinensis (gray squirrel): 124986940
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Entry
124986940 CDS
T08117
Name
(RefSeq) glutamate receptor 1 isoform X1
KO
K05197
glutamate receptor 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04024
cAMP signaling pathway
ncar04080
Neuroactive ligand-receptor interaction
ncar04713
Circadian entrainment
ncar04720
Long-term potentiation
ncar04723
Retrograde endocannabinoid signaling
ncar04724
Glutamatergic synapse
ncar04728
Dopaminergic synapse
ncar04730
Long-term depression
ncar05014
Amyotrophic lateral sclerosis
ncar05016
Huntington disease
ncar05017
Spinocerebellar ataxia
ncar05022
Pathways of neurodegeneration - multiple diseases
ncar05031
Amphetamine addiction
ncar05033
Nicotine addiction
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04024 cAMP signaling pathway
124986940
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124986940
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
124986940
04728 Dopaminergic synapse
124986940
04720 Long-term potentiation
124986940
04730 Long-term depression
124986940
04723 Retrograde endocannabinoid signaling
124986940
09159 Environmental adaptation
04713 Circadian entrainment
124986940
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
124986940
05016 Huntington disease
124986940
05017 Spinocerebellar ataxia
124986940
05022 Pathways of neurodegeneration - multiple diseases
124986940
09165 Substance dependence
05031 Amphetamine addiction
124986940
05033 Nicotine addiction
124986940
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncar04040
]
124986940
Ion channels [BR:
ncar04040
]
Ligand-gated channels
Glutamate (ionotropic)
124986940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
DUF659
Motif
Other DBs
NCBI-GeneID:
124986940
NCBI-ProteinID:
XP_047411744
EnsemblRapid:
ENSSCRG00010012896
LinkDB
All DBs
Position
6:142355663..142667479
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AA seq
906 aa
AA seq
DB search
MQHIFAFFCTGFLGAVVGANFPNNIQIGGLFPNQQSQEHAAFRFALSQLTEPPKLLPQID
IVNISDSFEMTYRFCSQFSKGVYAIFGFYERRTVNMLTSFCGALHVCFITPSFPVDTSNQ
FVLQLRPELQDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQVTAVNILTT
TEEGYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGFMDIDL
NKFKESGANVTGFQLVNYTDTVPAKIMQQWKSSDARDHTRVDWKRPKYTSALTYDGVKVM
AEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFNEKGR
RTNYTLHVIEMKHDGIRKIGYWNEDDKFVPAATDAQAGGDNSSVQNRTYIVTTILEDPYV
MLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGMVGE
LVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIW
MCIVFAYIGVSVVLFLVSRFSPYEWHSEEFEEGRDQTTSDQANEFGIFNSLWFSLGAFMQ
QGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIA
YGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLES
TMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRGPVNLAVLKLSEQGVLDKLKSKW
WYDKGECGSKDSGSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIEFCYKSRSESKRMK
GFCLIPQQSINEAIRTSTLPRNSGAGASGSGSGENGRVVSHDFPKSMQSIPCMSHSSGMP
LGATGL
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgcagcacatctttgccttcttctgcaccggtttcctaggcgcggtagtaggtgccaat
ttccccaacaacatccagatcgggggattatttccaaaccagcagtcacaggaacatgcc
gcttttagatttgctttgtcgcaactcacagagcccccaaaactgctcccccagattgat
attgtgaacatcagcgacagctttgagatgacctatagattctgttcccagttctccaaa
ggagtctacgccatcttcgggttctatgaacgaaggactgtcaatatgctgacctccttt
tgcggggccctccacgtgtgcttcattacgccgagctttcccgtcgacacatccaatcag
tttgtcctccagctgcgccctgaactgcaggatgccctcatcagcatcattgaccattac
aagtggcagaaatttgtctacatttatgatgccgaccggggtttatccgtcctgcagaaa
gtcctggacacagctgcagagaagaactggcaggtgacagcagttaacattttgacaacc
acagaggaaggataccggatgctttttcaggatctggagaagaaaaaggagcgtctggtg
gtggtggactgtgaatcagagcgcctcaatgccatcctgggccagattataaagctagag
aagaatggcattggctaccactacattcttgcaaatttgggcttcatggacattgactta
aataaattcaaggagagtggcgcaaacgtgacaggtttccagttggtgaactacacggac
accgtccctgccaagatcatgcagcagtggaagagcagcgatgctcgggaccacacccgg
gtggactggaagaggcctaagtacacctctgctctcacctacgacggggtgaaagtgatg
gctgaggctttccagagcctgcggagacagaggattgatatatcccggcgagggaatgct
ggcgactgcctggccaacccagcagtgccctggggccaggggatcgacattcagagagcc
ctacagcaggtgcggtttgaaggtttgacaggcaacgtgcagttcaatgaaaaaggacgc
aggaccaactacactctccatgtgatcgaaatgaaacacgatggcatccgaaaaattggt
tactggaatgaagatgataagtttgtccctgcagctactgatgctcaagctgggggagat
aactccagtgttcagaacagaacgtacatcgtcactacaatcctcgaagatccgtatgtg
atgctcaagaagaatgccaaccagtttgagggcaatgaccgctatgagggctactgtgta
gagctggcagccgagattgccaagcacgtgggctactcttatcgtctagagatcgtcagc
gatggaaaatacggagcacgggatccggacacaaaggcctggaacggcatggtgggagag
ctggtctatggaagagctgatgtggctgtggcccccttaactatcaccttagttcgggaa
gaggttatagacttctccaagccatttatgagtttgggaatctccatcatgattaaaaaa
ccacagaagtccaagccaggagtcttctccttcctcgatcctttggcttatgagatttgg
atgtgcatcgttttcgcctacatcggagtgagcgtcgtcctcttcctggtcagccgcttc
agcccctacgaatggcacagcgaagagtttgaggaaggacgagaccagacaaccagcgac
caggcgaatgagtttgggatattcaacagcttgtggttctccctgggagccttcatgcag
caaggatgtgacatttctcccaggtccctgtccggccgcatcgttggtggcgtctggtgg
ttcttcaccttgatcatcatctcctcatacacagccaacttggctgccttcctgaccgtg
gagaggatggtgtctcccattgagagtgcagaggacctagcaaagcagacagaaattgct
tacgggaccctggaagcaggatctactaaggaattcttcaggaggtctaaaattgccgtg
ttcgagaagatgtggacgtacatgaagtcagcagaaccgtccgtttttgtgcggaccacg
gaggaagggatgatccgagtgaggaagtccaagggcaaatacgcctacctcctggagtcc
accatgaatgagtacattgagcagcggaaaccctgcgacaccatgaaagtgggaggtaac
ttggattccaaaggctatggcattgcgacacccaaggggtccgccctgagaggtcccgta
aacctagcggttttgaaactcagtgagcaaggcgtcttagacaagctgaaaagcaaatgg
tggtacgataaaggggaatgtggaagcaaggactccggaagtaaggacaagacaagcgct
ctgagcctcagcaatgtggcgggcgtgttctacatcctgatcggaggacttggactagcc
atgctggttgccttaatcgagttctgctacaaatcccgtagtgaatccaagcggatgaag
ggtttctgtttgatcccacagcaatccatcaatgaagccatacggacatcgacccttccc
cgaaacagtggggcaggagccagcggcagcggcagcggagagaatggtcgggtggtcagc
catgacttccccaagtccatgcaatccattccctgcatgagccacagttcagggatgccc
ttgggagccacgggattgtaa
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