Sciurus carolinensis (gray squirrel): 124987252
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Entry
124987252 CDS
T08117
Name
(RefSeq) FAS-associated factor 2 isoform X1
KO
K18726
FAS-associated factor 2
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124987252
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
124987252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAF1
UBA_4
UBX
Thioredoxin_7
PEHE
Motif
Other DBs
NCBI-GeneID:
124987252
NCBI-ProteinID:
XP_047412315
EnsemblRapid:
ENSSCRG00010022986
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All DBs
Position
6:complement(130687987..130746184)
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AA seq
445 aa
AA seq
DB search
MAAPEERDLTQEQTEKLLQFQDLTGIESMDQCRHTLEQHNWNIEAAVQDRLNEQEGVPSV
FNPPPSRPLQVNTADHRIYRYVVSRPQPRGLLGWGYYLIMLPFRFTYYTILDIFRFALRF
IRPDPRSRVTDPVGDIVSFMHSFEEKYGRAHPVFYQGTYSQALNDAKRELRFLLVYLHGD
DHQDSDEFCRNTLCAPEVISLINTRMLFWACSTNKPEGYRVSQALRENTYPFLAMIMLKD
RRMTVVGRLEGLIQPDDLINQLTFIMDANQTYLVSERLEREERNQTQVLRQQQDEAYLAS
LRADQEKERKKREERERKRRKEEEVQQQKLAEERRRQNLQEEKERKLECLPPEPSPDDPE
SVKIIFKLPNDSRVERRFHFSQSLTVIHDFLFSLKESPEKFQIEANFPRRVLPCVPSEEW
PNPPTLQEAGLSHTEVLFVQDLTDE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcctgaggagcgggatctaacccaggagcagacagagaagctgctgcagttt
caggatctgactggcatagaatctatggatcaatgtcgccataccttggaacagcataac
tggaacatagaggctgctgtacaggacaggctgaatgagcaagagggtgtaccaagtgtt
ttcaacccacctccatcccgacccctacaggttaatacggctgaccacaggatctacaga
tatgttgtctcaagaccacaaccaagggggctgcttggatggggttattacttgataatg
cttccattccggtttacctattatacgatacttgatatatttaggtttgctcttcgtttt
atacggcctgaccctcgcagccgggtcactgaccccgttggggacattgtttcatttatg
cactcttttgaagagaaatatgggagggcacaccctgtcttctaccagggaacgtacagc
caggcacttaatgatgccaagcgagagcttcgctttcttttggtttatcttcatggagat
gaccaccaggactctgatgagttctgtcgcaatactctctgtgcacctgaagttatttca
ctaataaatacgaggatgctcttctgggcatgttctacaaacaaacctgagggatacagg
gtctcacaggctttacgagagaacacctatccattcctggccatgattatgttgaaggat
cggagaatgactgtggtgggacggttagagggccttattcaacctgatgacctcattaac
cagctgacatttattatggatgcaaatcagacatacctggtatcagaacgcttagaaagg
gaagaaaggaaccagacccaggtgctgagacaacagcaggatgaggcctacctggcctct
ctcagggctgaccaagagaaagaaaggaagaaaagggaggaacgagaacgaaagcggcgg
aaggaggaggaggtacaacagcagaaactggcagaggagagaaggcgacagaacttacag
gaggaaaaggaaaggaagttggagtgcctgcctcctgagccttccccagatgaccctgaa
agtgtcaagataattttcaaattacccaatgattctcgagtagagagacgattccacttt
tcacagtctctaacagtaatccacgacttcttattctccttgaaggaaagccctgaaaag
tttcagattgaagccaattttccccggcgggtactgccctgtgttccttcagaggaatgg
cctaacccccctacactgcaggaggcgggactcagccacacagaagttctctttgttcag
gacctaacagatgaatga
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