Sciurus carolinensis (gray squirrel): 124991195
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Entry
124991195 CDS
T08117
Name
(RefSeq) piwi-like protein 1
KO
K02156
aubergine
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncar03036
]
124991195
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
124991195
piRNA pathway
124991195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
GAGE
ArgoL1
ArgoN
ArgoL2
DUF4929
Motif
Other DBs
NCBI-GeneID:
124991195
NCBI-ProteinID:
XP_047417999
EnsemblRapid:
ENSSCRG00010009966
LinkDB
All DBs
Position
8:141811985..141832098
Genome browser
AA seq
861 aa
AA seq
DB search
MTGRARARARGRARGQETAQHVGAATSQQPGYIQQRPQQPPAEGDLVGRGRQRGAAGATA
KPAELQISAGFQELSLAERGGRRRDFHDLGVNTRQNLDHVKESKTGSSGIIVRLSTNHFR
LTSRPQWALYQYHIDYNPLMEARRLRSALLFQHEDLIGRCHAFDGTILFLPKRLQHKVTE
VFSQTRNGEHVRITITLTNELPPTSPTCLQFYNIIFRRLLKIMNLQQIGRNYYNPSDPID
IPNHRLVIWPGFTTSILQYENNIMLCTDVSHKVLRSETVLDFMFNLYHQTEEHKFQEQVS
KELIGLIVLTKYNNKTYRVDDIDWDQNPKSTFKKADGSEVSFLEYYRKQYNQEITDLKQP
VLVSQPKRRRGPGGTLPGPAMLIPELCYLTGLTDKMRNDFNVMKDLAVHTRLTPEQRQRE
VGRLIDYIHKDDNVQRELRDWGLSFDSNLLSFSGRILQAEKIHQGGKTFDYNPQFADWSK
ETRGAPLISVKPLDNWLLIYTRRNYEAANSLIQNLFKVTPAMGIQMKKAIMIEVDDRTES
YLRVLQQKVTSDTQIVVCLLSSNRKDKYDAIKKYLCTDCPTPSQCVVARTLGKQQTVMAI
ATKIALQMNCKMGGELWRVDMPLKLAMIVGIDCYHDTTAGRRSIAGFVASINEGMTRWFS
RCVFQDRGQELVDGLKVCLQAALRAWNSCNEYMPSRIIVYRDGVGDGQLKTLVNYEVPQF
LDCLKSVGRGYNPRLTVIVVKKRVNARFFAQSGGRLQNPLPGTVIDVEVTRPEWYDFFIV
SQAVRSGSVSPTHYNVIYDSSGLKPDHIQRLTYKLCHIYYNWPGVIRVPAPCQYAHKLAF
LVGQSIHREPNLSLSNRLYYL
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgactggtcgagccagagccagagcccggggcagggcccgtggtcaggagacagcacag
cacgtaggggcagccacgagtcagcagccagggtacattcagcagagacctcagcagcca
ccagcagagggggacttggttggccgaggacggcagagaggagcagcaggagccacagcc
aagcctgcagagctccagatatcagctgggtttcaggagctgtcgttggcagagagagga
gggcggcgcagagacttccacgatctcggtgtgaacaccagacagaacctggaccatgtc
aaggagtccaagacagggtcctcgggcatcatagtgagactgagcaccaaccacttccgg
ctgacctcccgtccccagtgggccctataccagtaccacatcgactacaacccgctgatg
gaggccaggaggctccgctccgcactcctcttccagcatgaagatctcattggaaggtgt
catgcttttgatggaacaatattatttttacctaaaagactacagcacaaggtcacggaa
gtgttcagccaaacccggaacggagagcatgtccggatcaccatcacgctgaccaatgag
ctcccgcccacgtcaccgacctgtctgcagttttataacatcatttttaggaggctcttg
aaaatcatgaatttgcaacaaattggacgaaactattacaacccaagtgacccgattgat
attccaaatcataggttggtgatctggcctggcttcaccacttccatccttcagtacgag
aacaacatcatgctgtgcacggacgtcagccacaaagtcctgcgcagcgagacggtgctg
gacttcatgttcaacctgtaccaccagacggaggagcacaagtttcaagaacaagtgtct
aaggagttgatagggctgatcgtcctgaccaagtacaataacaagacgtacagggtggac
gatatcgactgggatcagaacccaaagagcaccttcaagaaggcagatggctcagaggtc
agcttcctggagtactaccggaagcagtataaccaggagatcacagacctgaagcagcca
gtcctggtcagccagcccaagaggagaagggggcccgggggcacactgcccggccccgcc
atgctcatcccggagctctgctacctcacaggtctcacggacaagatgcggaacgacttc
aacgtgatgaaggacctggcggtgcacacgcggctgaccccggagcagcggcagcgggag
gtgggccgcctcatcgactacatccacaaagatgacaatgtgcagagggagcttcgagac
tggggcctgagcttcgactccaacttactgtctttctcgggacgaattttgcaagctgag
aagattcaccagggtggaaaaacatttgactacaatccacagtttgcagactggtccaaa
gaaactaggggcgccccgctgatcagcgtcaagcccctggacaactggctgctcatctac
acacggaggaactacgaagccgccaactcactgatacaaaatctgttcaaagtgacgccg
gccatgggcatacagatgaaaaaggcaatcatgatcgaagtggatgatagaaccgagtcc
tacctgcgggtcttgcagcaaaaggtcacgtcagatacccagatagttgtctgtcttttg
tcaagtaatcggaaggacaaatacgatgccattaagaagtacttatgtaccgactgcccc
accccgagccagtgtgtggtggcccggactctgggcaagcagcagacggtcatggccatc
gccaccaagattgccctgcagatgaactgcaagatgggcggcgagctctggagggtggac
atgccactgaagctggcgatgatagttggcatcgattgttaccatgacaccacagctgga
cgaaggtcaattgcaggatttgtggccagtatcaacgaagggatgacccgctggttctca
cgctgtgtcttccaagaccggggacaggagctggtggacgggctcaaggtgtgcctgcaa
gcggctctgcgggcctggaacagctgcaatgagtacatgcccagccgcatcatcgtgtac
cgggacggcgtgggcgacggccagctgaagaccctggtcaactacgaggtcccgcagttc
ctggactgcctcaagtccgtgggtcgaggctacaaccccaggctgacggtgatcgtggtc
aagaagcgcgtgaatgccaggttcttcgcccagtctgggggaagacttcagaacccactc
ccggggaccgtcatcgatgtggaggtcacccgccctgagtggtatgacttcttcatcgtg
agccaggctgtgaggagcgggagcgtgtccccaacacactacaacgtcatctacgacagc
agtggcctgaagcctgaccacatccagcggcttacctacaagctctgccacatctactac
aactggccgggggtcatccgcgtgcctgcaccctgccagtacgcacacaagctggccttc
ctggtgggccagagcatccacagggagcccaacctctcgctctccaaccgcctctactac
ctctga
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