KEGG   Sciurus carolinensis (gray squirrel): 124993134
Entry
124993134         CDS       T08117                                 
Name
(RefSeq) transcription factor SOX-2
  KO
K16796  transcription factor SOX2 (SOX group B)
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04390  Hippo signaling pathway
ncar04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04390 Hippo signaling pathway
    124993134
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    124993134
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ncar03000]
    124993134
Transcription factors [BR:ncar03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    124993134
SSDB
Motif
Pfam: SOXp HMG_box HMG_box_2
Other DBs
NCBI-GeneID: 124993134
NCBI-ProteinID: XP_047420710
EnsemblRapid: ENSSCRG00010018521
LinkDB
Position
9:52188915..52191254
AA seq 320 aa
MYNMMETELKPPGPQQTSGGGGGGGGNSTAAAAGGNQKNSPDRVKRPMNAFMVWSRGQRR
KMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTK
TLMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNGSYSMMQDQ
LGYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGMAL
GSMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQH
YQSGPVPGTAINGTLPLSHM
NT seq 963 nt   +upstreamnt  +downstreamnt
atgtacaacatgatggagacggagctgaagccgccgggcccgcagcaaacttcggggggc
ggcggcggcggcggcggcaactccaccgcggcggcggcgggcggcaaccagaagaacagc
ccggaccgcgttaagcggcccatgaacgccttcatggtgtggtcccgcgggcagcggcgc
aagatggcccaggagaaccccaagatgcacaactcggagatcagcaagcgcctgggcgcc
gagtggaaacttttgtcggagacggagaagcggccgttcatcgacgaggccaagcgactg
cgagcgctgcacatgaaggagcacccggattataaataccggccccggcggaaaaccaag
acgctcatgaagaaggataagtacacgctgcccggcgggctgttggcccctggcggcaac
agcatggcgagcggggttggggtgggcgccggcctgggcgcgggcgtgaatcagcgcatg
gacagttacgctcacatgaacggctggagcaacggcagctacagcatgatgcaggaccag
ctgggctatccgcagcacccgggcctcaacgcgcacggcgccgcgcagatgcagcccatg
caccgctacgacgtgagcgctctgcagtacaactccatgaccagctcgcagacctacatg
aacggctcgcccacctacagtatgtcctactcgcagcagggcacccctggcatggcgctt
ggctccatgggctcggtggtcaagtccgaggccagctctagccccccggtggttacctct
tcctcccactccagggcgccctgccaggccggggaccttcgggacatgatcagcatgtac
ctccccggcgccgaggtgccggagcccgccgctcccagcagacttcacatgtcccagcac
taccagagcggcccggtgcccggcacagccattaacggcacactgcccctctcgcacatg
tga

DBGET integrated database retrieval system