Notothenia coriiceps (black rockcod): 104940793
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Entry
104940793 CDS
T04920
Name
(RefSeq) uncharacterized protein LOC104940793
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncc04131
]
104940793
Membrane trafficking [BR:
ncc04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
104940793
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
SAM_2
TPR_2
zf-FCS_1
TPR_12
SH3_1
TPR_1
SH3_9
TPR_8
SAM_PNT
TPR_10
Motif
Other DBs
NCBI-GeneID:
104940793
NCBI-ProteinID:
XP_010764072
UniProt:
A0A6I9MHW4
LinkDB
All DBs
Position
Unknown
AA seq
1889 aa
AA seq
DB search
MLRGKLRILQADSTEVNALFMELSTHLISINSEENIIFVTFKTFEEIWKFTTYYTIGFLG
RCMEDLLLDQRFCLSSLEEDIRIQVSIQEETLSLIYKGILMQEGSFFASCSTNQMFDSST
SGGDLYLEQGEIAQFEPPFLGSGWTMLCLADGGRGTAPRPAVKPVMPFYQWFLKSCAEGI
LVGDGKPSCDFPLQFARGTCLATMEYDAGGPDELSMAPGDRIIIVGLLVSCFEWFTGRKE
ATGEVGLVKTSLVEPSTDITQSEDIFLDGEERTLFSVQEDKVIEETTALLQKKSQNDTGQ
KYKLGTMSCQDAEKKKSLGTSSKVDAQTDLKRNIQRILDQGKHSSPGPVVTVNGTLKELH
LATESKNPIPPCFTVHPVVEGNTNTENFIPLLSLLEGRDYRAEFGVLYGLGSELLASSIF
TGHSDEDELIAFLGVARETARKKRLYWPHTRLCFLLGKLCAGRLKFSQARVYLEEALSVP
REGFTDLRLLASIYSRLVPIYLLQKNTESFFALAERLVALLFGIPDCLACLEDNSALKYI
LKKAVLSHNQMAEARACYQLAKHHLTHAEGLRVVPYLERLLVLSGEAQRTWGTSPSQDYL
TLGRIYSELQLPHLSVSSARRASLQPSATLTDCLSSMALAMDNVNKLYEFTEQEESIPPK
VAPYLHQALSSIQGEGNDRYHVLGHRITVCLSQLFCKNSMVGHAICRMHTLINNNGPSLC
ISVPERNSALIWLAWLHIDNHQPDVALDVLDLVLASMPEHCTTPQEGVVLNMRGVALRYM
GDLRRAAESYQAAVDICQEYEDMPNWAVAQANLGLLCLKAGAKGLAQRHLTEAVQLFSEL
EEGGHEADFITVLLELGQHYVKQQQLDFGKGCYEWALLLAINANLLDYTSTYDPHPRLTP
PMLLDPLQPHGDSLPPTPPLLPLSPCPHRVSAAHIPKAAGAAAPPPPHLLIPAPPKLTST
ATPALRTYSRPILPSKTSPTIPSSPVTSTSLTNGNTRPTPISTPITPFHTPASPPGRQVS
QVHPAGTPGLVRANQSASPVRQRVSQQTLLLGKGLKGCGQDQVLLRAQMLILTSAMRPAL
SSSSSSSSPASSSPLYSNPASAQLQSLTLRPPPPGVLTIPPSLRLKTPCSAPPPLSRPHA
PIFPPLRPRPQSCSTETPNTPSRHLSVPPPTLYSPVRAVPLRPRLHSPNGHRVVSSRQTS
TFQPIAAAPVCQAPPTRSPLSALKSCPLTQTLLGQSQHSSLPGTTSASSHFERTPSAARQ
LQIIALSSGRQTKPCTYPPAALAPPTVEAQEKPSQSKRTLSGEHVLPLPRPLIPSLPKNS
SPPFLLSPASPPQTQTLLRRGEGREEDEQREGGRGREGDREELRGEKDDQRGKEKQKLHP
EREESIVGQKKEEEETVRVEEHMEVTEEGQSDGQKAGKKMEEEGESAMDQSESLHQDQNL
DADPVEDEEQKPVLGPAPEFLQPGGQEDFSEDMSTQSDNQSALSSLSSQSPPSSPFISPS
GEPHPPLLPPQPALPTDLSQSQPETEKVAKSNGDSQPPETETEPLGQSGDESENLDQSLS
SPWEPGAWPEGRQVLTHLVEGFVIQEGLQPFPVNRSSLLVPARVSTPQEVNGTNGSAALP
VTDTEKPDEHCIESEGELGGDAEDPDKSPVQRDRTVLHCQFCGKRGHAHNFMRSKRFCST
SCARGFNVRLTKRLRALSAGSRSERPRPALNRAESVPGKPLLLRLPRDLWSAGRREKEGK
EKATEAEEDEEEEEEEEEEGGEEEEEMEGGGEEEEDDEGEEDPAVAMTARMERRAARRAR
RASAPPLTTPTPKPTSTFRPPPTQWSVEEVTAFIHTLPGCSDVAEAFRLQEIDGQALLLL
TEDHLMTSMNIKLGPALKICAHINTLKNQ
NT seq
5670 nt
NT seq
+upstream
nt +downstream
nt
atgctgagagggaaactgcgcattctgcaagctgacagcaccgaggtcaacgctctgttc
atggagctgtctactcatctgatctccatcaacagtgaagaaaatattatttttgtcaca
ttcaaaacatttgaagaaatatggaagttcaccacatattacacaattggtttcctgggt
cgctgtatggaggatctgttgttagaccagaggttttgtctcagttctctggaggaggac
atcaggatccaggtctccattcaggaggagaccctcagcctgatatacaaaggcatactc
atgcaggaagggtctttctttgctagctgtagcaccaaccagatgttcgacagctccacc
tctggaggggacctgtacctggaacagggggaaatagcccagttcgagccccccttcctg
ggctcagggtggaccatgctctgcctggctgatggaggccgaggcactgcacccagacct
gctgtgaagcccgtcatgcctttttatcagtggtttcttaaatcctgtgcagaaggcatt
ttagttggtgatgggaaaccctcctgtgacttccctctgcagtttgccagaggaacctgt
cttgccacaatggagtacgatgctgggggcccagatgagctgagcatggcccctggtgat
cgcatcatcatcgtgggacttctggtgtcttgttttgagtggttcacagggaggaaggag
gccacaggagaagtgggtctggtgaagacaagcctggtggaaccctccactgacattacc
cagtcagaagatatttttttggatggagaggaaagaacactcttcagtgtgcaagaggac
aaagtcatagaggaaacaactgcgttactgcagaagaaatcccaaaatgataccggtcag
aaatacaaacttggtacgatgagttgccaagacgctgagaaaaaaaaatcactcggcact
tcaagcaaagttgacgctcagactgaccttaagagaaatattcagaggatacttgatcag
ggaaaacactcatcaccaggtcccgtagtgaccgttaacgggactctaaaggaactgcac
cttgcaacagaatcaaagaaccccatccctccgtgcttcacggtccacccggtggtcgaa
ggaaacaccaataccgagaacttcatccccctcctctctttactggagggacgagactac
agagcagagtttggcgtcctgtatggactgggttcagaactcctcgcgtcctccatcttc
accggccactcggacgaggatgagttgattgccttcctgggtgttgctagggaaacagcc
aggaagaagcgactctattggccgcatactcggttgtgctttctgttgggtaagctttgt
gctgggaggttgaagttcagccaggcccgggtttacttggaggaagccctcagcgtgcca
cgagagggcttcacggacctcaggttgttggccagcatctactcaagactggttcccatt
tacctcctgcagaaaaatactgagagtttctttgctctggccgaacgactcgttgccttg
ctatttggaatcccagactgcctggcatgtttagaagacaactccgctcttaaatacatc
ctcaagaaagctgttctatctcacaaccaaatggcggaggcccgggcttgttaccaattg
gcgaagcaccacttgactcatgctgaaggattgcgagttgttccttatcttgaaagacta
cttgttctttctggtgaagctcaaaggacttgggggacctctcccagtcaggactacctc
acactgggaaggatctacagcgaactccagctcccccacctcagtgtcagttcagccagg
agagcttctctgcagccctctgctacactgacagactgtctcagcagcatggcactagct
atggacaatgtcaacaaactgtatgagttcacagaacaggaagagtccatcccacctaaa
gtggctccatatttacaccaagccctttcttctatccaaggagaaggaaatgatcgatac
catgttctgggtcatcggattactgtttgtctcagccaactgttttgcaagaactcaatg
gttggacacgccatctgccgcatgcatactctgatcaacaacaacggaccctcactctgc
atctccgtcccagaaagaaacagtgccctcatctggctggcatggcttcacattgacaat
catcagccagatgttgctttggatgtcctggatttggtcctagcttccatgccagaacac
tgcacgacccctcaggaaggtgtggtcctcaacatgcgtggtgttgcacttcgatacatg
ggtgacctccggagggcagcagagagctatcaggctgctgtggacatctgccaagagtat
gaggacatgccaaactgggctgtagctcaggctaacctagggctgttgtgtctgaaggct
ggagctaaaggactagcccagagacacctgacagaggctgtgcagctcttctctgagctg
gaggaaggagggcatgaggctgacttcatcaccgtgctgctggagctgggtcagcactat
gtgaagcagcagcagctggactttgggaaaggatgctacgagtgggctcttctgctagct
atcaacgctaacctgctagactacacctccacctacgacccccaccctcgcctcacccca
cccatgctcctcgatcccctgcagccacacggtgactcactcccaccaactcctccactc
ctccccctctcaccctgcccccatcgcgtctctgcggcacacataccgaaggcggcgggg
gcggctgctcctccacctccccaccttctcatccctgctcctcctaaactcacctccacc
gccacaccggctctccgcacctactcccgccccatcctcccctccaaaacatctcccacc
atcccctcctctcctgttacctccaccagcctcaccaacgggaacacaaggcccaccccc
atctccacacccatcacaccctttcacacaccagccagtccacctggaagacaggtatca
caagttcaccctgcgggcacacctggtcttgtgcgagccaatcagagcgcctccccagtg
cggcaaagggtatcccagcagaccctgctcctggggaaaggtctcaaagggtgcggacaa
gaccaggtgctgctcagagctcagatgctgattcttacgtctgctatgcgacctgcactc
tcctcttcttcttcttcctcctcccccgcctcctcctcccctctttactctaaccctgcc
tccgctcagctccagagtctcaccctcaggcctcctccccccggggtcctcaccatccct
ccctcactccgcctgaagacaccctgctccgccccgcctcccctctctcgccctcacgcc
cccatcttcccccccctaaggccccgaccacagtcttgcagcacagagacccccaacacg
ccgagccgtcacctctccgtccccccgccaactctgtactctcccgtgcgagccgtcccg
ctgcgcccccggctccactctccaaacggacaccgagtggtgtcctctcgtcaaacttca
acctttcaacccattgctgcagcccccgtctgccaggccccccccactcgctcgccactg
tctgcactgaagagctgtccgttaacccagactctgctcggccaatcacagcacagttcc
ttacccgggaccacgtctgcttcctctcactttgagcgcacgccgtctgcggcgaggcag
ctgcagatcatcgctctctcctcgggacgccagaccaagccttgcacgtacccccccgca
gcgttagcccctcctactgtggaggcgcaggagaagcccagccaatcaaagaggacgttg
agcggcgagcacgtccttcctcttcctcgtcctctgatcccctctttgccaaaaaacagt
tcgcctccattcctcctgagtccggcttcccctcctcaaacacaaactctgctccggaga
ggagaggggagggaggaagatgagcagagagaaggaggaagagggagagagggagacaga
gaggagctgaggggggagaaagacgaccaaagagggaaagagaaacagaagctccatcct
gagagggaagaaagcattgttggtcagaagaaagaggaagaggaaacagtcagagtggaa
gagcacatggaagtgacagaggaaggccaaagtgatggacagaaggcggggaaaaagatg
gaggaggaaggagagagcgccatggaccagtctgagagtctccatcaggaccagaactta
gatgctgaccctgttgaagacgaggaacagaaaccagtcctgggtccagctccagagttt
ctgcagccgggcggtcaggaggacttcagtgaggacatgtccactcagtctgacaaccaa
tcagcgttatccagcctctcctcccagtctcccccctcctcacccttcatctccccctct
ggagaaccccatcctcccctcctcccccctcagcctgccctccctactgacctcagccaa
tcacagcccgagacggaaaaagttgcgaaatcaaacggcgactcgcagccgccagaaacg
gagacggagcccctcggccaatcaggagacgagtcggagaatttggaccaatcgctgagt
agcccctgggaaccgggggcgtggccggaggggaggcaggtgctgactcacctcgtggag
ggcttcgtcatccaggaggggctgcaaccttttccagtgaaccgctcgtccctgctggtt
cccgcgcgggtctccacgccacaggaagtgaacgggaccaacggcagcgcagcacttcct
gtgacggacacagagaaaccagatgagcactgcatcgagtcagagggggagttgggggga
gacgcagaggaccccgacaagagtccggtacaaagggacaggacggtgctgcactgccag
ttctgcgggaagcgaggccacgcacacaacttcatgcggtccaaacgcttctgctccact
tcctgtgcacgcgggtttaacgtgcgtctgacgaagcgtctgcgggctctgagcgcaggg
agccggtctgaaaggccccgacccgctctgaacagggccgagtccgtcccggggaagcct
cttttactgagactgcctcgtgatctgtggagcgccgggcggcgagagaaggaggggaag
gagaaggcgacggaggcagaagaagatgaggaggaggaagaggaggaggaggaggagggg
ggggaagaagaggaggaaatggagggaggaggagaggaggaggaagatgatgagggggaa
gaagatcctgctgtcgccatgacggccaggatggagcggcgggcggcgaggagagcgagg
agggcatccgcccccccgctgaccacgcccacccccaaaccaacaagcaccttcagaccc
ccccccacccagtggagcgtggaggaggtcaccgccttcatacacacactgccaggctgc
agcgacgtggccgaggcgttccggctgcaggagatcgatggccaagctctgctgctactc
actgaggaccatctgatgaccagcatgaacatcaaacttggaccagcactcaagatctgc
gctcacatcaacacactgaaaaaccaatga
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