Notothenia coriiceps (black rockcod): 104942216
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Entry
104942216 CDS
T04920
Symbol
col8a2
Name
(RefSeq) collagen alpha-2(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
ncc
Notothenia coriiceps (black rockcod)
SSDB
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Paralog
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
PA14
Motif
Other DBs
NCBI-GeneID:
104942216
NCBI-ProteinID:
XP_010765716
UniProt:
A0A6I9MV21
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Position
Unknown
AA seq
639 aa
AA seq
DB search
MIYFPDMPPMIEVKGEPGPQGKPGPRGPPGPSGLPGKPGLGKPGLNGQPGLQGPPGFPGI
GKPGLPGLPGKLGPKGMSGLTGEVGPRGEPGPRGLSGQPGFPGPAGLSLNGKPGLPGIRG
PPGAQGEPGLKGLSGQPGERGSKGENGQGKPGPSGIRGPPGLKGSPGPPGLPGIGKPGLK
GLPGLPGLKGDLGSPGEGGEPGEPGAPGLQGLPGPVGLGKTGLDGLPGGPGQVGPKGEAG
QRGSPGFPGTPGYGKPGLSGPKGEKGHGGLPGLPGDKGEPGMVGSLGETGFDGQTGPPGL
QGPMGLPGKHGMSGQKGELGPQGPPGLPGFRGDQGPSGSFGKPGIPGEKGLPGSIGAIGK
PGPKGESGHIGLPGNPGLLGAPGVKGETGFIGTPGSRGQSGIPGLQGPMGPMGPQGVPGL
KGDSGMPGLPGLGKFGEKGPIGPQGPPGKPGPAGLNGNHGTPGPPGPPGPPGNGQTVIAG
PTDSQLEGDEVPGDRKVPAYNQVPLSASVAPAFTAILSTPFPPSAMPIKFDRTLYNGQNA
YSTATGMFTAPLSGVYYFAYHMHVKGTSLWVALYKNNVPATYTYDEYKKGYMDQASGSAV
LELKEGDQVWIQMPSDQANGLYSTEYIHSSFSGFLLCPT
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgatttattttccagatatgccacccatgatagaagtgaagggggaaccaggcccccaa
gggaaacctggaccaagaggtcctcctgggccgtcaggacttccaggaaaacctggactg
ggcaaaccaggtcttaatggccagccaggacttcaggggcctcctggttttccaggaatc
ggtaagcctggacttccaggtctcccgggaaagcttgggccaaaggggatgtcagggctt
actggtgaggttggccctcgaggtgaaccaggtccaagaggtttatcagggcagcccggc
ttccccggcccagctggcttgtctctgaatggaaaacccggacttccaggcatcagaggt
ccccctggggctcaaggggaaccaggattaaagggtctttcaggccagccaggagagcgt
ggatctaagggtgagaatggacaagggaagccagggccttctggtataaggggtcctcct
gggcttaaaggcagtccaggaccacctggtcttccaggtattggcaagccaggactgaaa
ggtttgcctggactacctggtcttaaaggtgatctaggaagcccgggggaaggaggagaa
ccaggagagcccggggctccaggtctacaaggtctgccagggccagttgggttaggaaag
actgggctagatggactgcctggaggtccaggtcaagtaggtccaaaaggggaggcaggg
caaaggggttctcctggatttcctgggacccctggctatggaaaacctggtctaagtggg
ccaaaaggagagaagggccatggtggattgcctggtctcccaggggacaaaggagagcca
ggaatggtgggctcacttggggaaacaggctttgatggacaaacaggaccaccaggactt
caaggcccaatgggactccctggaaaacatggaatgtcaggacagaagggagaactgggg
ccccagggccctcctggactgcctggcttcagaggtgaccaaggcccgagtggatccttt
ggaaaacctggcatccccggagaaaaaggcctccctgggtctattggtgctattggaaaa
cctggacccaagggtgagtcagggcatattggcctacctggaaatccagggctgctaggt
gctccaggggttaaaggtgagacagggtttatagggactcctggctccaggggtcagtca
ggtattcctggtctacaggggcccatgggccccatgggcccccagggggttcctggactt
aagggcgactccggaatgccagggcttccaggccttggtaagtttggagagaagggacca
ataggtccccagggtcctccagggaaaccaggccctgctgggcttaatggtaaccacggc
actcctggtcctccagggccccccggtcctccaggaaatggtcaaacagttattgccggt
ccaacagattcacagttggaaggggatgaggtaccaggggacaggaaagtgcctgcctac
aatcaagtccccctctcggcctccgtggctccagccttcacagccatcctctccacaccg
ttccctccctctgccatgccaatcaagttcgacaggactctgtacaacgggcaaaatgcc
tacagcactgctacaggcatgttcaccgctcctttatctggtgtctactactttgcgtac
cacatgcatgtgaagggaactagtctgtgggtggcactgtacaagaacaatgtacctgcc
acttacacctatgatgaatacaagaagggctacatggaccaggcgtccggtagtgcggtc
cttgagctgaaggagggtgaccaggtatggatccagatgccctcggatcaggcaaatggc
ctctattccaccgagtacatccattcctccttctcaggattcctgctctgtcccacataa
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