Notothenia coriiceps (black rockcod): 104943216 Help Entry 104943216         CDS       T04920                                  Name (RefSeq) collagen alpha-1(XI) chain-like   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism ncc  Notothenia coriiceps (black rockcod) Pathway ncc04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:ncc00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     104943216  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:ncc00536]     104943216 Glycosaminoglycan binding proteins [BR:ncc00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    104943216 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Motif Other DBs NCBI-GeneID:  104943216 NCBI-ProteinID:  XP_010766857 UniProt:  A0A6I9MR31 LinkDB All DBs Position Unknown AA seq 1014 aa AA seqDB search MGIKGDRGELGMLGSRGEDGPEGPKGRSGPNGESGPLGPAGEKGKLGVPGLPGYPGRQGP KGSSGFPGFPGANGEKGARGTAGKAGPRGQRGPTGPRGGRGARGPTGKPGAKGTSGNDGP PGGPGERGPQGPQGPVGFSGPKGPPGPSGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGP QGPTGETGPVGERGHPGPPGPPGEQGLPGSAGKEGAKGDPGPQGSAGKDGPPGLRGFPGE RGLPGATGPAGLKGGEGPQGPSGPVGSSGERGPAGTAGPIGLSGRPGPQGPPGPAGEKGA PGEKGPQGPAGRDGVQGPVGLPGPAGPQGPPGEDGDKGEVGEPGQKGSKADKGEQGPPGP SGLQGPIGAPGPAGGDGEPGPRGQQGMFGQKGDEGSRGFPGPPGPIGLQGLPGPPGEKGE NGDVGPMGPPGPPGPRGPQGSSGADGPQGPPGGVGPMGSVGEKGEQGEAGNPGQPGEAGT GGPKGERGEKGESGPSGSAGPAGAKGPPGDDGPKGNPGPVGFPGDPGPPGEAGVAGTDGE SGEKGDDGEAGQAGPPGPSGESGPPGPPGKRGPPGAAGLEGRQGEKGTKGEAGLEGPAGK TGPVGPQGPSGKPGPEGLRGIPGPVGEQGLPGAPGQDGPPGPMGPPGLPGLKGDPGSKGE KGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGGKGDGGISGASGPLGPPGPPGLPGPQGP KGSKGSSGPAGTKGDTGTIGPPGAPGPPGEVIQPLPIRSPKRSKRSIDMQSDAAANIMDY GEGMEDIFGSLNNLKQDIERMKYPMGTQNNPARTCKDLQLSQPEFPDGEYWIDPNQGCSG DSFKVYCNFTAGGESCIYPDKKSDGVKISSWPKELPGTWFSEFKRGQILSYVDADGNSIN MVQMTFLRLLTASARQNFTYSCHQSVAWHEASSDSYDKSLRFLGANDEEMSYDNNPYITA LSDGCATRKGYGKTVMEINTPKIDQVPIIDVMLSDFGDANQKFGFEVGPVCFLG NT seq 3045 nt NT seq  +upstreamnt  +downstreamnt atgggaatcaaaggagaccggggtgagcttggcatgcttgggtcccgtggagaggatggt cctgagggtcctaaaggccgatctggccccaacggagagtcaggtcccctcggtcctgct ggagaaaagggtaaactgggtgttccaggattgccaggttatcccggaagacaaggacct aagggctcaagcggtttccctgggttccctggagccaatggcgagaaaggagcaaggggc actgcaggcaaagctggtccaagaggccaaagagggccaacgggtcctcgtgggggtcga ggagccagaggtccaacagggaaacctggcgccaagggtacatcaggcaacgacggccct ccgggtggacctggagagagagggcctcaaggacctcagggaccagtgggcttctctgga ccaaagggcccccctggcccatctggaaaggatggactgcctggacaccccggtcagcgt ggagagacgggtttccaaggaaaaactggtccaccaggtccaggaggtgtcgtcgggccc cagggtccaaccggagagacaggtcccgttggtgagagaggacaccctggaccccccggc ccgcccggagagcagggtcttccaggatctgctggcaaggagggagcaaagggagaccca ggaccccagggatctgctggtaaagacggaccccccggccttcgaggcttccctggagaa agaggtctacctggcgccacgggccctgcaggtctgaagggaggagaggggccccaaggt ccatctggtcctgttggttcttctggtgaaagaggtcctgctggtacggctggtccaatt ggcctgtctggcagacctggccctcagggtccccccggacctgcaggggagaagggagca cctggtgagaaagggcctcaaggtcctgctggtcgtgatggtgtccagggtcctgttggt ctgcccggacctgctggacctcagggtccacctggagaagatggtgacaagggagaggtt ggagagcctggtcagaaaggaagcaaagccgacaagggagaacagggtcctcctggccca tctggtctccaaggtcccataggtgcaccaggtcctgctggaggtgatggagagcctggt cccagaggtcagcagggtatgtttggacagaagggagatgaaggctccagaggtttccct ggccctcctggtcccattggtctgcaggggcttcctggacctcctggtgagaagggagag aacggtgatgttggccccatgggccctcccggtccccctggtcccagaggtcctcagggt tctagtggagctgatggtccccaaggccctccaggtggtgtgggccccatgggatcagtt ggcgagaagggcgaacaaggtgaggccggaaacccaggacaacccggagaggccggaact ggggggcctaaaggcgagagaggagagaaaggagagtctggcccctctggatctgctgga cctgccggtgccaaaggaccccctggggatgacggtccaaaaggcaaccctggtcctgtt ggattcccaggagaccctggtcctcctggagaagccggtgtcgctggaactgatggagaa tcaggagagaaaggagatgatggggaggctggacaggcgggacctccaggtccatcagga gaatctggcccacctggaccacctggcaaaagaggacccccgggggctgctggtttagag ggcaggcaaggagagaagggcactaagggtgaagcaggacttgagggtccagcaggtaaa accggaccagttggaccccagggaccctcaggaaagcccggtccagagggtctgcgtgga atccctggccctgtgggtgaacaaggactgcctggagccccaggacaagatggtccacct ggtcctatgggtcctcctggccttcctggtttgaaaggagaccctgggtctaagggtgaa aagggtcatccaggtttgattggtctgatcggaccccctggtgagcagggagagaaggga gaccgaggtttgcccggaccccaaggttcttccggtggcaagggtgacggtggtatcagt ggagcttctggtcctcttggtcctccaggtccccctggtctgcctggtcctcaaggtccc aagggatccaagggttcatctggtccggctggtacaaagggagacaccggtacaattggt cctcctggtgctcctggccctcctggtgaagttatccagcccctgcccatccggtctcca aagagaagcaagcgctccattgacatgcagtcagacgcagctgctaacatcatggactac ggcgagggcatggaggacatcttcggctcactcaacaacctcaaacaagacatcgagcgc atgaaataccccatgggcacacagaacaatcctgccaggacatgcaaggacctgcagctc agccaacctgagttccccgatggcgagtactggatcgatccaaaccaaggctgctccggg gattccttcaaagtctactgtaacttcaccgccggaggcgaaagctgcatctatcctgat aagaagtctgatggagtcaaaatatcttcatggcccaaagaacttcctgggacatggttc agtgaatttaagcgtggtcaaatactttcttacgttgacgcagatggaaactcaatcaac atggtccagatgaccttcctcagactactgacagcctctgccaggcagaacttcacctac agctgccaccagtctgtggcgtggcacgaggccagcagcgacagctacgacaagtcgctg cgcttcctgggcgccaacgatgaggagatgtcctacgacaacaacccttacatcacggcc ctctcagacggatgtgcgacgaggaagggctatggaaagactgtgatggagattaatact cccaaaatcgatcaggttccaatcatcgatgtcatgttgagtgactttggggacgccaac cagaagtttgggtttgaagttgggcccgtctgcttccttggctaa

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