Notothenia coriiceps (black rockcod): 104944949
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Entry
104944949 CDS
T04920
Symbol
tnfrsf1a
Name
(RefSeq) tumor necrosis factor receptor superfamily member 1A
KO
K03158
tumor necrosis factor receptor superfamily member 1A
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04010
MAPK signaling pathway
ncc04060
Cytokine-cytokine receptor interaction
ncc04150
mTOR signaling pathway
ncc04210
Apoptosis
ncc04217
Necroptosis
ncc04920
Adipocytokine signaling pathway
ncc05132
Salmonella infection
ncc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104944949 (tnfrsf1a)
04150 mTOR signaling pathway
104944949 (tnfrsf1a)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
104944949 (tnfrsf1a)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
104944949 (tnfrsf1a)
04217 Necroptosis
104944949 (tnfrsf1a)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
104944949 (tnfrsf1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
104944949 (tnfrsf1a)
09171 Infectious disease: bacterial
05132 Salmonella infection
104944949 (tnfrsf1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
ncc04050
]
104944949 (tnfrsf1a)
04090 CD molecules [BR:
ncc04090
]
104944949 (tnfrsf1a)
Cytokine receptors [BR:
ncc04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
104944949 (tnfrsf1a)
CD molecules [BR:
ncc04090
]
Proteins
104944949 (tnfrsf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNFR_c6
Death
DUF4083
Syndecan
Protocadherin
Glycophorin_A
ABC2_membrane_3
Motif
Other DBs
NCBI-GeneID:
104944949
NCBI-ProteinID:
XP_010768855
UniProt:
A0A6I9N486
LinkDB
All DBs
Position
Unknown
AA seq
396 aa
AA seq
DB search
MMEGAGLRGRWDRKAPVGTILLPMCMFLTAVTLISEAKTCPAGDYDNDNGVCCNKCLPGF
RLVEKCHSNNTRSICKQCGTGLYTDQENYARNCRSCRKCKASNHEVEISPCKAVRNTVCR
CEDGYYKHNIDSEKYECLKCSSCKLNEIEKRTCTPENNTVCACEEKYYRVKGKTCEPCKT
CTSECQHHCLPITTKTKAPDHRNDHLINIIVGVVVGSMVSMGLVFLVTYMVTKRSTKKKM
QKKTSQELDPCPESGEQFLTLIESADIQSDRALPLSAVSDQEPPNLPDCVPLEVKIPELI
YTVLDLVPVLQVKQLVRTLGVTDTEIEQAEADHRSCREAHYQMLRVWAEKGSRSGGGGGG
RGTMLHWPLLQELLDQLRKMHLGWAAEELETKYDIQ
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgatggagggcgctgggctgagaggaagatgggacagaaaagctcctgttggcacaata
cttctcccaatgtgcatgttcctcaccgctgtgacattgatctcagaggccaagacgtgt
ccagctggggattatgacaatgacaacggggtctgttgcaacaaatgccttccaggtttt
aggcttgtagaaaagtgtcattctaataatacaaggagtatctgcaagcaatgtggcact
gggctgtacacagaccaggagaactacgcacgcaactgcaggagctgcagaaagtgcaaa
gcatcaaatcatgaggtggagatatccccatgtaaagcagtcagaaacacagtgtgtcgc
tgtgaggacggttactacaagcacaacatcgactcagagaaatacgagtgtctcaagtgt
tcatcatgtaaactgaacgagattgagaaacggacatgtacaccagagaacaacacagtg
tgtgcatgtgaagagaagtactacagagtcaagggcaagacatgtgaaccctgcaagact
tgtacgtctgagtgccaacaccactgtttgccaattactacaaaaacaaaagctcctgat
cacagaaatgatcatctcatcaacataatcgttggcgttgtagtggggtcaatggtatcg
atggggctggtgtttctcgtcacctacatggtcacaaaacgctctaccaagaagaagatg
cagaagaaaaccagccaggaattggacccttgcccggagtcaggcgagcaattcctgacc
ctcattgagtctgcagatatccagagtgatagggctctccctctaagtgctgtgagtgac
caggagccgcccaatctgcccgactgcgtcccgctggaagtcaagatccctgagctgatc
tacacggtgctggatctggttcccgtgctgcaggtgaagcagctggtgcgaaccctcggt
gtgacggacacagagatcgaacaggcggaggcggaccacagatcctgccgcgaggcccac
taccagatgctgagggtttgggcggagaaagggtctcgttcaggaggaggaggaggagga
agaggaacaatgctgcactggcccttgttgcaggagctgttggaccaactgaggaagatg
cacctgggctgggccgcggaggagctggagacaaagtacgacattcagtaa
DBGET
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