Notothenia coriiceps (black rockcod): 104948535
Help
Entry
104948535 CDS
T04920
Name
(RefSeq) LOW QUALITY PROTEIN: xylosyltransferase 2-like
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ncc00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
ncc01100
Metabolic pathways
Module
ncc_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
104948535
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
104948535
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ncc01003
]
104948535
Enzymes [BR:
ncc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
104948535
Glycosyltransferases [BR:
ncc01003
]
O-Glycan biosynthesis
Glycosaminoglycan
104948535
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Branch
Xylo_C
Motif
Other DBs
NCBI-GeneID:
104948535
NCBI-ProteinID:
XP_010773039
UniProt:
A0A6I9N563
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MVASARVQKLLRRYKLAIAAALTILLVQGLVVWSLRSLEEGEAEKKTRRSKLPDHNSQDP
KRDPALWEKQNSLSGRDRGRWSGRSERTGGTAASALRRGTNRRGEKPSVRVKAHQNRGVT
GPGLEHAVVHDPSSSRNFSETRGGADGMAKVPAAAMLGEPGSVDGAHQPSSDFVPKCHIT
GKDALSALHRAGSQQCRQEIANIVCQHHAGELMPGALPQFCPQLGISNQVQSVGELDNSL
LEVENPVRVAFVLMVHGRAVRQLKRLIKAIYHQDHFYYIHVDKRSGYLHREVLQIAQQYP
NIRTTPWRMVTIWGGASLLKAYLRSMQDLLNMLDWKWDFFINLSATDFPTRTNDELVSFL
SQQRDKNFLKSHGRENARFIKKQGLDRLFHECDNHMWRLGERSIPEGLEVSGGSDWFALT
RRFVEYVINSQDALVSGLKQFYTYALLPAESFFHTVLGNSHMCDTLVDNNLRVTNWNRKL
GCKCQYKHIVDWCGCSPNDFKPQDLIRIQQLTRPTFFARKFESSVNQEAIDILDSHLYGQ
YXSGTTALKAYWESLFETEDGLAALSDAALHRAPAFFFVFGLRNL
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggtggccagcgctcgagttcagaagctgctccgacgatacaaactagcgatagccgcc
gcgttaactattctcctggtccaggggcttgtggtatggagtctgagaagtctggaagag
ggcgaggcagagaaaaaaacacggcggtctaagctgcctgaccacaacagccaggacccc
aagagagacccggctctttgggagaagcagaactctttgtcggggcgggaccggggccga
tggagcggtcggtcggagaggacggggggcacggccgccagcgcactgaggaggggaacc
aaccgcagaggagagaagcccagcgtcagggtgaaggctcatcagaaccggggggtaacg
ggacccgggttagaacacgccgtcgtccatgacccgtccagcagccgtaacttcagcgag
accagaggaggcgcagacgggatggcgaaggttccggccgccgccatgctcggggagccg
ggcagcgtggacggggcgcaccagcccagcagcgactttgtgcccaaatgtcacatcacg
ggcaaggacgcgctgtccgccctgcatcgcgccgggtcgcagcagtgccggcaggagatc
gccaacatcgtgtgtcagcatcacgccggggagctcatgccaggcgcactccctcagttc
tgccctcagctcggtatatctaatcaggtgcagtccgttggcgagctggacaacagcctg
ctggaagtggagaacccggtcagagtggcgttcgtgctgatggtccacggccgcgctgta
cggcagctcaagcgcctcatcaaagccatatatcaccaagaccacttctactacatccat
gtggacaagcgctcgggctacctgcatcgggaggtgctgcagatcgcccagcagtacccc
aacatccgcaccacgccctggaggatggtcaccatctggggaggggccagcctcctgaag
gcctacctgcgcagcatgcaggacctgctcaacatgctggactggaagtgggacttcttc
atcaatctgagcgctacagatttccccaccaggacgaatgatgagctggtgtcgttcctc
tcgcagcaaagagacaagaacttcctcaagtcccacgggagagaaaacgcccggtttatt
aagaagcagggtctggaccgcctcttccacgagtgtgacaaccacatgtggcgtctgggc
gagcgtagcatcccagaaggcctggaggtctccggcggatctgattggttcgcgctcacc
cgccgcttcgtggagtacgtcatcaactcccaggatgccttggtgtctgggctgaagcag
ttctatacctacgctctgcttcccgctgagtccttcttccacacggtgctggggaacagc
cacatgtgcgacaccctggtggacaacaacctgcgcgtcaccaactggaaccgcaagctg
ggctgcaaatgtcagtacaaacacatcgtggactggtgcggctgctcgcccaacgacttc
aagcctcaagacctcatcaggatccagcaactgacccgtccgacgttcttcgcccgcaag
tttgagtcctcggtgaaccaggaggccatcgacatcctggacagccacctgtacggccag
tacngctcgggcaccacggcgctgaaggcgtactgggagagtctgtttgagacggaggac
ggcctggccgcgctcagcgacgcagcgctccaccgcgcaccggctttcttcttcgtcttc
ggtctgaggaacctgtga
DBGET
integrated database retrieval system
