Notothenia coriiceps (black rockcod): 104950364
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Entry
104950364 CDS
T04920
Name
(RefSeq) arginine-glutamic acid dipeptide repeats protein-like isoform X1
KO
K05628
arginine-glutamic acid dipeptide repeats protein
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncc03000
]
104950364
Transcription factors [BR:
ncc03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
104950364
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Atrophin-1
CCDC47
Motif
Other DBs
NCBI-GeneID:
104950364
NCBI-ProteinID:
XP_010775184
UniProt:
A0A6I9NBQ1
LinkDB
All DBs
Position
Unknown
AA seq
1007 aa
AA seq
DB search
MFKPVKEEEDGLSGKHSMRTRRNRGSMSTLRSGRKKQTSPDGRASPTNEDLRSSGRTSPS
AASTDSTDSKTDSMKKPSKKIKEEAPSPMKSAKRPREKGASDTEEPDRAGVKKSKTQELS
RPDSPSECEGEGEGESSDGRSVNEELSSDPKDIDQDNRSSSPSIPSPRDNESDSDSSAQQ
LLQSQHLLQSQHPPVIQCQPGPSAASAALPPPTTSAPSLPPQASPTAASTSLPPLSLPQP
SPMSLIQSGASLHPQRLPSPHSPLAPPPGPPGPPPSLPSSHHGPMPPMPHPLQPGPSHMP
HPHSMPPQGFPVGQSQVPPLQIPGQSQQRSHSPPSQSQSSAQSGCQPPREQPLPPAPMSM
PHIKPPPTTPIPQMPNPQSHKHPPHASAPPFPQMPSNLPPPPALKPLSSLPIHHPPLAHP
PPLQLMPQGQQLQPPPAQPPVLTQSQSLPPSASHQPPQAPPLPPSAAAASHPSGPPQPTF
TSHPFNTVLPPSGPPPTSSNSMPGIQPPSSSAPSSISMPLPASVPCAGPGPVLPPVHIKE
EPLDEMEEPESPPPPQRSPSPEPTIVNVPSHASQSARFYKHLDRGYNSCARTDYYFTPLA
SSKLAKKREEALEKAKREAEQKVRDEKEREREREKEREREREREKEHERAVKASSSHDGR
MGDPHMGGPVHMRHQYDGPPTTIAAVPPYIGPDTPALRTLSEYARPHVMSPNNRNHPFFV
SLNPADPLLAYHMPGLYNADPGMRERELREREMREREIRERELRERMKPGFEVKPPEMDS
LHPSTNPMEHFARHGAISLPHMAGPHHFAAFHPGLNPLERERLALAGPQLRPEMSYPERL
AAERLHAERMAAVANDPIARLQMFNVTPHHHQHSHIHSHLHLHQQDPLHQGGECLVCPPG
SGGHPLVDPLGGPHLARFPYPPGAIPNALLGNPHEHEMLRHPVFGTPYPRELPPQMSAAH
QLQAMHAQSAELQRLAMEQQWLHGHHHMHGGPMPGQEDYYRYNKKFG
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaacctgtcaaagaggaagaagatggactcagcgggaagcatagcatgaggacc
cgacggaaccgaggctcgatgtcgacgctacgtagtggtcgtaagaagcagaccagtcct
gatggcagagcctcacctaccaacgaggatttgcgctccagtgggcgtacctcgcccagc
gcagcaagtaccgacagcactgacagcaagacggactccatgaagaagcccagcaagaaa
attaaagaggaggctccttcacctatgaagagcgccaagcggccgcgagagaaaggagcc
tcagacacagaggagccagacagggccggcgttaaaaagtccaagacacaagagctcagt
cgaccagactcgccctcagagtgcgagggggagggggagggcgagagctctgacgggcgc
agcgtcaacgaggagctcagtagcgaccctaaggacattgaccaggacaaccgcagctcc
tccccgagcatccccagcccgcgggacaacgagagcgactcagactcgtccgcccagcag
ctcctgcagagccagcacctcctgcagagccagcaccccccagtcatccagtgtcagccc
ggcccctcagcagcctcagctgcactgcctccacccacaacctcagccccctcactgccc
ccacaggcctcccccacagcggcctccacctctctacctcccctgtctctgccccagcca
agcccaatgtctcttatccagtcaggagcgtccctccaccctcaaaggcttccctctcca
cattcacctttggctccgcctcccggccccccaggtccacctccgtcattacccagctcg
catcacgggcccatgcctcccatgccccatccgctgcagcctggcccctcacacatgcct
caccctcactccatgccccctcagggcttccctgtgggtcagtctcaggtcccacccctt
caaatccctggccaatcacagcagaggtcgcactcgcctccctctcagtcccagtcatcc
gctcagagtggatgccagcctcccagagagcagccccttccccccgcccctatgtccatg
cctcacatcaagcctcccccaaccacacccatcccacagatgcccaacccacagtctcac
aaacacccgccccacgcctcagcgcctccattccctcagatgccttcaaacctgcctcca
cctcctgccctcaagcccctcagttctttacccatccaccatcctccattagcacacccc
cctcccctacagctcatgcctcaggggcaacagctccagcctccaccagcccagcccccc
gttctcactcagtcccagagcctgcccccatcagccagccaccaacctcctcaagcccct
cccctgccgccctccgcagcagcagcctcacaccccagcggacccccgcagccgaccttt
acgtcgcaccctttcaatacagttctacctccgtcaggccctccccccacctcatcaaac
tctatgcctggcatacagccgccttcctcctccgctccctcctccatctccatgccactg
cctgcctcagtcccgtgtgccggccccggcccggtactcccacctgtacacatcaaagag
gagcctctggacgagatggaggagccagagagccccccacccccacagagaagcccctcc
ccagagcctaccatcgtcaatgtgcccagccatgccagccagtcggcacggttctacaag
cacctggaccggggatacaactcgtgtgctaggacagattactacttcactccactggct
tcatcgaaactggccaagaagcgagaggaagctctggagaaagccaagagggaagcagag
cagaaagttagggacgagaaggagagagagagggagagggaaaaagagcgagaaagagag
cgggagcgagaaaaggagcatgagcgagctgtgaaagccagttcctctcatgatggcagg
atgggtgaccctcatatgggcggccctgttcacatgcggcaccaatacgacgggcccccc
actacgatcgcagctgtgcctccgtacatcggccccgacactcctgccctgcgtacactc
agcgagtacgcccgaccccacgtcatgtcccctaacaatcgaaaccacccgttctttgtg
tccctcaaccccgcagacccgctgctggcctatcacatgcccggcttgtacaatgctgac
ccgggcatgcgggagcgcgagctacgggagcgagagatgcgcgagagggagattcgtgag
agggagctgagggagaggatgaaacctggtttcgaggttaagcctccagagatggactca
cttcacccttccacaaaccccatggagcactttgcccggcatggagccatctcgttgccc
cacatggccggccctcaccatttcgcagctttccatccgggcctgaacccattagagcgt
gagcgactggccctcgctgggccccagctgcggccagaaatgagctacccagagaggttg
gctgcagagagactccatgccgagaggatggccgcagtggccaacgaccccatcgcccgc
ctacagatgttcaacgtcacgccacaccaccaccagcactcacatattcactcacaccta
cacctccaccagcaagaccctcttcaccaaggtggggagtgtttagtgtgtcctccaggc
tctgggggccatcccctggtagaccccctcggaggccctcacctggctcgcttcccttac
ccccccggcgccatccccaacgctctgcttggcaacccgcatgaacacgagatgctgcgc
cacccagtcttcggtactccatacccccgcgagctgccgccacagatgtccgcagcccac
cagctgcaggccatgcacgctcagtccgctgaactccagaggctggccatggagcagcag
tggctacacgggcaccatcacatgcacggaggacccatgcctggccaggaggactactac
aggtacaacaaaaaattcggctga
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