Notothenia coriiceps (black rockcod): 104950711
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Entry
104950711 CDS
T04920
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncc04131
]
104950711
Membrane trafficking [BR:
ncc04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
104950711
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
Ig_2
LRR_9
LRRNT
V-set
LRR_6
Motif
Other DBs
NCBI-GeneID:
104950711
NCBI-ProteinID:
XP_010775567
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
MGVSLGQDVGWLLPFLFLLLMITVSPSHAQGCPQRCDCIAKLKTVSCFGKRLSSLPDGIP
GDTKTLDLTGNKLRWVEHGDLLPFTRLEKLDLSENMISVLEPNAFSSLQNLQSLSLRSNQ
LKLVPMGAFSRLSNLTSLDLSGNKIVILLDFTFQDLKSLTNLEVGDNDLVYISNKAFLGL
VGLKELTIERCNLTSVSSQSLSYLQNLVTLRLRYLSISSLEDQNFRKLGNLKGLEIDHWP
FLEHIAPHSLQGLNLSWLSITHTNITTVPTSALRSLAHLTSLNLSHNPISVLESWALRDL
IRLKELHLVNTNLVVVQPYALGGLRSIRLLNFSNNGLVSLEEGAFQSVNTLETLRLDGNP
LACDCRLLWILQRRKTLNFDGASPVCMSPVEVQGRALNAFSDSALFDHFTCQKPKIRNRK
LQQVTAREGQVVSFICKAEGEPAPMIFWISPQRRRITTKSSGRLTVLREGTLEIRYAQVT
DSGTYICIASNAGGNDTYFATLTVSGLPLDAALMANRTYYAGDLNDTNLNDTRVFLKFTL
DLQTILISTAMGCIMFLGVVLFCFILLFVWSRGRGQHKNNFSVEYSFRKVDGPAASGGQG
GARKFNMKMI
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgagtctgggccaggatgtaggctggctcctgcctttcctgttcttgcttctc
atgatcacagtgtcacccagccatgctcaaggatgtccccagcgttgtgattgcattgcg
aaactcaagactgtgtcctgtttcggtaaacgcctttcctcactgccagatggcatccca
ggggacaccaagaccctggacctcaccgggaataaacttcgctgggtggagcatggtgac
ctgctcccatttacacgtcttgaaaagctggacctgagtgagaacatgatcagtgtcctc
gaaccgaatgctttttctagtctccagaacctccagtcactttcactgaggagcaaccaa
ctgaagctggtccccatgggggctttctcacgtctctccaacctgacttcattggacctc
agtgggaataagattgtaattcttttggactttactttccaagatttgaagagtctgaca
aatctggaagttggagacaatgatttagtttatatttccaacaaggccttcctgggtcta
gtggggctgaaggagttaaccattgagcggtgcaacctgacgtctgtgtccagccagtct
ttgtcctacctgcaaaacctggtgactctgcgtctgcgctacctcagcatctccagctta
gaggaccagaacttccgtaaactgggaaacctgaagggccttgagatcgatcactggccc
ttcttggagcacattgcccctcacagcctgcagggtctcaacttatcttggctgtctata
actcacactaatataaccactgtgcccacctccgccctacgcagtctggcacatctcacc
agcctcaacctctcccacaaccccatctctgtgctggagtcctgggcgctgcgggacctt
attaggctgaaggagctgcatctagtaaacacaaatctggtggtggtgcagccatatgcg
cttggtggtcttaggtccatccgtcttcttaacttctccaataacggcctggtgtccctg
gaagagggagcctttcagtccgtcaacactctggagacgctgcgtttggacgggaaccct
ctggcctgcgactgccgcttgctatggatcctccagcgcaggaagacccttaattttgac
ggcgcctccccagtgtgcatgtcacccgtggaggtgcagggacgggcgcttaacgctttt
tccgactcagctctctttgatcactttacctgccagaagcccaaaatccgcaacaggaaa
ctgcagcaggttactgcccgtgagggacaggtggtgtctttcatttgcaaagcagaaggt
gagccggcaccgatgatattctggatctctcctcaacgccgccgcatcaccacaaagagc
agtggccgcctcacagtgttacgagagggcactttagaaatacgatacgcacaggtgaca
gacagtgggacctacatctgcatagctagcaatgctggtggcaatgacacctattttgcc
acacttacagtcagtgggctgcctctagatgcagctcttatggccaaccgcacgtattat
gctggagaccttaatgacacaaatctgaatgacaccagagtcttcttgaagtttactttg
gacctacagaccatcctcatatccacggctatgggctgtatcatgttcctgggggtggtt
ctgttctgtttcattctgctctttgtgtggagtcgaggcagagggcagcacaagaacaat
ttctcagtggagtattccttcagaaaggtggatggacccgctgccagtggagggcagggt
ggggcacgcaagttcaacatgaaaatgatttga
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