Notothenia coriiceps (black rockcod): 104951258
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Entry
104951258 CDS
T04920
Name
(RefSeq) E3 ubiquitin-protein ligase UBR5-like
Organism
ncc
Notothenia coriiceps (black rockcod)
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Ortholog
Paralog
GFIT
Motif
Pfam:
E3_UbLigase_EDD
Motif
Other DBs
NCBI-GeneID:
104951258
NCBI-ProteinID:
XP_010776197
UniProt:
A0A6I9NI17
LinkDB
All DBs
Position
Unknown
AA seq
1221 aa
AA seq
DB search
MTSIHFVVHPLPGTEDQLNDRLREVSEKLNKYSFNSHPHLSRLEQATLKQCVVGPNHAGF
LLEDGRVCRISFAVQPDRLELSKPEGNDGSKLSSGSGTGRSSRPGRTSDPPWFLSGSDTL
GRLAGNTLGSRWSSGVNGGSGGGGSGGGAGGGGAGGGSSGGGGGGSGGGSGGGGTSGRSS
TAARDSRRQTRVIRTGRDRGSGLLGSQPQPVIPASVIPEELITQAQVVLQGKSRSVIIRE
LQRTNLDVNLAVNNLLSRDDEDGDDGDDTASESYLPGEDLMSLLDADIHSAHPSVIIDAD
AMFSEDISYFGYPSFRRSSLSRLGSSRERDSELLRERESVLRLRERRWLDGASFDTERGS
TSREGEPSLDKKSIPVQSPVSLGEELQWWPDKDGVKFVSIGAMFTEMVAVSSKGELYQWK
WSEPEPYRSAQNPSVHHPRVSFLGLANEKITLLSANSIRATVATETNKVATWVDDTLSTV
ASKLEHSAQAFPELQGERIVSLHCCALYTCVQLENTLYWWGVVPFSQRKKMLEKARAKNK
KPKSSAGISSIPNITVGTQVCLRNNPLYHAGAVAFSVSAGIPKVGVLLESVWNMNDSCRF
QLRSPESLKNLEKTPKTLEIKTESKPELVKTEMGPPPSPASTCSDTSSIASSASLPYKRR
RSTPAPKEEEKVNEEQWPLREVVFVEDVKNVPVGKVLKVDGAYVAVRFPGTSSSMSNQST
AAPTDSDPSSLLQDCRLLRIDELQVVKTGGTPKVPDCFQRTPKKLCIPEKAEILAVNVDS
KGVHAVLKTASWVRYCIFDLATGKAEQENNFPTSNLAFLGQSERNVAIFTAGQESPIILR
DGNGTIYPMAKDCMGGIRDPDWLDLPPINSLGMGVHSLANLPSNSTIKKKAAIIIMAVEK
QTLMQHVLRCDYEACRQYLVNLEQAFLLDQGSQALGALLDHRCDGNRNILHAAVSVCFPV
SNKETKEEEEAERSERNTFAERLSAVEAIANAISVVSSNSSGNRTGSSSSRGLRLREMMR
RSLRAAGLGRHESGPSSSDHQDPVSPPIAPPSWVPDPPPMDPDGDIDFILAPAVGSLTTA
STGTSQGPSTSTIPGPSTEPSVVESKDRKANAHLILKLMCDSVVLRPHLRELLSAKDARG
MTPFMLAVSGRAYPAAITVLEAAQKMAKVGDPGIAEKEDADSVFTEMICPSGTNPDDSPL
YVLCCNDTCSFTWTGAEHINQ
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgacatctattcacttcgtggttcacccgttgcccgggactgaggatcagctcaatgac
aggctccgggaagtctcagagaagctcaacaaatacagctttaacagccatccacacctt
agtcggctggagcaggcgaccctaaaacagtgtgttgtcggtccaaaccatgccggattt
ctgcttgaggatggccgcgtgtgcagaatcagctttgctgtccagcctgatcgcctggag
ctcagcaaaccggaaggcaacgatggttcaaagttgagcagtggttcagggacaggaagg
agctccaggccaggcaggactagtgatccgccctggttcctgtcgggctctgacacactg
ggcagactggcaggcaacacccttgggagtcgctggagctctggcgttaatggaggcagc
ggaggaggtggaagtggaggaggagcagggggaggcggagctggaggtggcagcagtgga
ggaggaggaggagggagcgggggtggaagcgggggcggaggcacgtcgggcaggtcgtca
acagcagctcgcgattcccgtcgacagacccgtgtgatccgtacaggaagggatcgtggc
tcagggctgctgggtagccagcctcagccggtcataccagcatctgtcatccctgaagaa
ctcattactcaggcccaggtagtccttcaggggaagtccaggagtgtgatcattcgcgaa
ctccagaggaccaaccttgacgttaacctcgccgtcaacaacctgctgagccgggacgat
gaagatggagatgatggagatgacactgccagcgagtcctacctccctggagaggacctg
atgtccctgttggatgcagacatccactctgctcatcccagtgtgattattgacgctgac
gccatgttctctgaggacatcagctactttggatacccctctttcagacgctcctcgctg
tctcgcctgggatcctccagagagcgcgactcagagctattgcgtgagcgcgagtccgtg
ctgaggttacgtgagcgccggtggctggatggggcctcctttgacacagagcgaggctcc
actagccgcgagggcgagcccagcttggacaagaagagcatcccggtccagagccctgtc
tccttgggagaggagctccagtggtggcctgacaaggatggggtgaagtttgtgagcatc
ggcgccatgttcacagagatggtggctgtcagctccaaaggagagctgtatcagtggaag
tggagcgaacctgaaccttacaggagtgcacagaatccttccgttcatcacccgcgtgta
tccttcctcggcctggccaatgagaagatcaccttattgtctgccaatagcatcagagca
actgtcgctacagagaccaacaaggtggcgacctgggtagacgacacactgagcacagtg
gcttctaagcttgagcacagtgctcaggctttccccgagctgcagggggaacgcattgtg
tcactgcactgctgtgcgctctacacgtgtgtacagctggagaataccctctactggtgg
ggtgttgtgccttttagtcaacggaagaaaatgcttgaaaaggccagagccaagaacaaa
aagcccaaatccagtgctggcatctcgtcaattccgaacatcaccgtgggaacacaggtg
tgcttgaggaataaccccctctaccatgccggtgcagtggccttttctgtcagtgctggg
attcccaaagtgggcgtcctgttggagtcagtgtggaacatgaacgacagctgcaggttc
cagctgcgatctccagagagcctcaagaacttggaaaagacgcctaagaccctggaaatc
aagacggaaagcaagccggagctggtgaagactgagatgggacctcctccctcgccagcg
tccacctgcagtgatacctcttctattgctagcagtgcctcactgccctacaagcgaagg
cgttctaccccagctcctaaagaggaagagaaggtgaacgaggagcagtggcctctcagg
gaggtggtgtttgtggaggatgtcaaaaatgttcccgttggaaaggtgctcaaagtggac
ggcgcgtatgttgctgtcaggtttccaggaacatcgagcagcatgagcaaccagagcact
gctgctcccactgactccgacccttcatcactgctgcaggactgtcggctcctcagaata
gacgagctgcaggtcgtcaaaactggcgggactcctaaagttcctgattgttttcagcgc
acacctaaaaagctctgcatcccagaaaaggcagagattctggctgtgaatgttgactca
aagggagtccacgccgtgctgaaaactgctagctgggttcggtactgtatctttgacctg
gctacaggcaaagctgaacaggagaacaacttccccacaagtaacctggccttcctgggt
cagagtgagcgcaatgtcgctatcttcactgcaggacaggaatctcccatcatcctacga
gatggaaatggcacaatctacccaatggccaaggattgcatgggtggaattcgagatcct
gattggttggacctgccacctataaacagcctgggaatgggagtgcactctctggccaat
ctcccctctaactccacgattaaaaagaaagctgctatcattattatggctgtcgagaaa
cagacgctgatgcagcatgtgctgcgttgtgactacgaggcgtgtcggcagtacctggtg
aacctggagcaggccttcctgttggatcagggcagccaggccctcggagcccttctggat
catcgctgtgatggaaaccgcaacatcctccatgccgccgtctccgtctgcttccctgtt
agtaacaaggagaccaaagaggaggaagaagctgaaaggtcggagagaaacacatttgca
gagcgtctttccgctgtggaggcaattgccaatgccatttctgtggtttcaagcaacagt
tctgggaataggactggctcctccagcagcagagggctacggctgagagagatgatgcgg
aggtctctgagagcagcaggtctaggccgccatgagtctggcccgtcatccagcgaccac
caggaccccgtgtcaccacctattgccccaccaagttgggtccccgacccgccacccatg
gaccctgatggtgacattgacttcattcttgcccccgctgtgggttcactcaccactgct
tccactgggaccagccaggggcccagcacctccaccatcccagggccgtccactgagccc
tctgtggtggagtctaaagacaggaaggccaacgcccatctcatcttaaagctgatgtgt
gacagtgttgttctgaggccacacctacgggagctattatctgcaaaggatgcccgtgga
atgactccattcatgctggcagttagtgggagagcctacccagcagccatcactgtgctg
gaggctgctcagaaaatggccaaggtgggtgacccaggcattgcagagaaggaggatgct
gattctgtgttcacggaaatgatctgcccctcggggaccaacccagatgactcccccctc
tatgttctctgctgcaatgacacctgcagtttcacttggaccggagcagagcacattaac
cag
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