Notothenia coriiceps (black rockcod): 104952487
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Entry
104952487 CDS
T04920
Name
(RefSeq) neurogenic locus notch homolog protein 2-like
KO
K20995
Notch 3
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04330
Notch signaling pathway
ncc04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
104952487
04371 Apelin signaling pathway
104952487
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
Ank_2
Ank
EGF_2
Notch
EGF_3
NODP
NOD
Ank_3
Ank_4
Ank_5
DL-JAG_EGF-like
cEGF
Motif
Other DBs
NCBI-GeneID:
104952487
NCBI-ProteinID:
XP_010777616
UniProt:
A0A6I9NT17
LinkDB
All DBs
Position
Unknown
AA seq
2474 aa
AA seq
DB search
MEGNIPWIILSFLLFMQICYGFRCLDKFKPCDNGGTCLDSPSRCICRPGYIGPLCQQLDP
CHQSPCLNGAVCKGQVVNGIPQSTCVCQRGFRGKDCSLIDACATSPCANGARCAHWNNHY
NCSCPPGFQGKNCRSDIDECRKPGMCLNGGLCMNTHGSFRCQCQPGYSGRTCEVSVLPCA
PSQCMNGGTCRQTSDHSYECACLPGFEGHNCENNVDDCPGHKCMNGGICVDGVNTYNCQC
APEWTGQYCAEDVNECLMQPNACHNGGTCFNTIGSHTCVCVNGWTGDDCSENIDDCAIAV
CFFGATCHDRVASFFCECPVGKTGLLCHLDDACVSNPCNEGAVCDTNPLNGRAICTCPAG
FVGGACNQDMDECSIGANPCEHFGKCVNTEGSFQCQCGRGYAGPRCEIDINECLSMPCQN
DATCLDRIGEFTCICMPGYMGTYCEVDVDDCESNPCVNDGICRDMVNGFTCTCQPGFTGT
MCQIDIDECASTPCQNGAKCYDRPNGFECRCAEGYEGTLCDSNINNCQPDPCHHGTCIDG
IASYSCNCHAGYTGYRCENQLNECHSNPCQNGGKCVDLVNKYICQCQHGTSGTNCEINFD
DCSSNPCDYGICKDGINRYDCVCKPGFTGSKCNMEIDECSSSPCRNGGTCVDEENGFHCQ
CPEGFKPPYCYSQVDECGSSPCVHGSCRDDINGYRCDCEPGWVGKNCDLDRNDCLPSPCQ
NAGTCIDQLNGFTCKCRQGFRGNLCQMNINECASSPCLNKGTCVDGVASFTCLCELPYNG
PTCAEVLTPCSPNPCANHALCTHTPDYLGYQCNCQTGWQGQLCNVDVNECISNPCKNRGT
CTNTLGGFVCSCRAGFTGLTCETDVNDCTPNPCLSGGSCTDSVNSFHCSCLAGFTGPRCA
LEINECQSSPCKNGGTCTDYVNSYTCTCRPGFTGNHCETNIPDCTESSCFNGGSCTDKIN
GYSCNCRSGFTGSHCQYEVNECDSQPCLNAGICQDALESFRCSCPKGYTGSRCQTPVDWC
RRSSTCQNGGRCRQKDASFTCECTNGWSGRYCDISRVSCETAARQRGLQTDELCHHGGHC
VNTGNSHYCKCPTDYTGSYCESQVDHCEDKPCRNGATCRGYVGGYQCDCMPGFTGQNCEI
EINECQSHPCQNGGTCIDLVGHYICSCPPGTLGVLCEINEDDCALPLRLRSAPPKCLNNG
TCVDRVGGYRCNCPPGFKGERCEGDINECLSNPCSPPNSLDCIQLPNDYQCVCKPGFTGR
KCQNSFSVCESQPCQSGGVCSVSSSSAMGYTCTCQLGYAGLNCERIMSCRELPCYHGGSC
ALTQRGVRCTCHPGYGGPQCQHRSNEGCSSKPCQNGGLCTEETSFPYFHCQCPSGWTGKR
CEQDIMPNKPQVPICPLADCRSKAKDGVCDKECNTFFCDWDGGDCSLTSKNPWAQCSQCW
SVFNNSQCDESCNNADCLYDNFDCMNKEKVCNPVYEAYCIDHYANGECDPGCNSVECGWD
GLDCAKKVPEVLADGVLILVVLLPPEELQRTSTAFLQKLSAILHTSLRFQLDGNGDAKIH
PYTRGARLKRELQPKQEVIGSIVYLEIDNRLCAAQSSEGCFPSAERAADYLGALSAVEML
RFPYPIKEAVGVERDPPPDPIPQWAKLMLVGLASLFLMVILVLGMLIARRKREHSTLWFP
EGFFLKKEPSSNKNRREPVGQDALGMKHMAKTAEESLLGDHSDQWMDTDCPEAKRLKVEE
PSMLSDSEDAVDCRQWTQHHLAAADIRVPPTMALTPPQGEFESDCMDVNVRGPDGFTPLM
LASFCGGGLEPEVTEEEESEECSANIISDLIYQGASLAAQTDRTGETALHLAARYARADA
AKRLLDAGADANAQDNTGRSPLHAAVAADAQGVFQILIRNRATDLDSRMYDGSTALILAA
RLAVEGMVEELITCHADVNAVDELGKSALHWAAAVNNVEATVALLKNSANKDMQDLKEET
PLFLAAREGSCEAVKVLLAHFANREITDHMDRLPRDIAQERMHHDIVQLLDEYNTVRSPQ
GHGGIGHHLSGVHSLSPLMCPPGAYMPSLKNTPQGKKNRRPCAKGSSLGGQHAASLKESV
KARNKKLTLDMQSALLESSVTLSPVDSLDSPHGGASNAGYMTNPTSPVAMQSPGLYHTSM
SVPNTPMIHSSMLDGSGPFAVSLAQLNELGSGGMSLQGRVSMASDVNHGYVMSSGQMGLN
MGLVSPVSVPFDWHSRMSSSQCGQQVLNLVQSGQAGMHPQSPAMQQQTMLMHQQLYRNAM
LQPTPVTSTPTISPVKLPSIAEQQQQQQQQQQQLLNHTIANQQNMARIGTSSPPTPQTSQ
PPPSFFQQQQMPQQPSQPQLPAQPPQAAPPAAQPSQALPSQHSGSTAGTEDYPTPPSQHS
YSSALDATPKHYLHLPSEHPYLTPSPESPEPWSSPSPHCVSDWSDSTPSPAVAGPAQTQI
SQIPEANGKMQVFA
NT seq
7425 nt
NT seq
+upstream
nt +downstream
nt
atggaagggaatattccatggattattttgtcatttttattgtttatgcaaatttgctac
gggttccgatgcctggataaattcaaaccttgtgataatggagggacatgcttagattca
ccctctcgatgcatatgtcgtccaggatacattggtcctctgtgtcagcaactggatccc
tgtcatcaatcgccatgtctgaacggagcagtttgcaagggccaggtggtcaatggtatc
ccacaatccacctgtgtgtgccaaagagggttcagaggcaaagactgctccctcattgac
gcatgtgccacaagtccctgtgccaatggagcccgttgtgcccattggaataaccactac
aactgttcctgcccacctggcttccagggaaagaactgccgcagtgacattgacgagtgc
cgcaagcctggcatgtgcctcaatggtggcctctgcatgaacacccatgggtccttccgc
tgccagtgccaacctggatacagtgggcgcacatgtgaggtgtccgtccttccctgtgcc
ccttctcagtgcatgaacgggggcacctgtcgacagaccagcgaccattcctacgagtgt
gcttgcctaccagggttcgagggacacaactgtgagaataatgtggatgactgtccagga
cacaagtgtatgaatggaggaatatgtgtagatggagtcaacacgtacaattgtcagtgc
gcaccagaatggacagggcaatactgtgctgaggatgtgaacgagtgtctcatgcaacca
aacgcctgccataatgggggtacttgcttcaacaccattggtagtcatacatgtgtctgc
gtgaatggttggactggagatgactgcagtgagaacattgatgactgcgccatagctgtt
tgtttctttggggccacctgccatgaccgagtagcatccttcttctgcgagtgcccagtt
ggaaagacaggtttgctgtgccaccttgacgatgcatgtgtgagtaacccctgcaacgag
ggggcagtgtgcgacaccaaccccctcaatggccgcgccatttgtacctgtcccgccggc
tttgtaggaggtgcatgcaaccaggatatggatgagtgttcgattggtgccaacccatgt
gagcattttggaaaatgtgtaaacacagagggctccttccagtgtcagtgtggccgagga
tatgccggtccacggtgtgagattgacatcaatgaatgcctctccatgccctgccagaat
gatgccacttgcctggaccgcattggagagttcacctgcatctgcatgccaggttacatg
gggacgtactgtgaggttgacgtagacgactgtgagagcaacccgtgtgtgaatgatggt
atctgtcgggacatggtcaatggcttcacatgcacctgccagccagggtttactggcacc
atgtgtcagatcgacatcgatgagtgcgccagcacgccatgccagaatggggcaaaatgc
tacgacagaccaaatgggttcgagtgccgctgtgctgaaggttatgaggggacactctgt
gacagtaacatcaacaactgtcagcccgacccatgccaccatggtacttgcattgatggt
attgccagctacagctgtaactgtcatgctggctacacaggctatcgctgtgagaaccag
ctcaatgagtgccacagcaacccttgtcagaatgggggcaagtgtgtggatctagtcaac
aagtacatctgccagtgtcaacatgggacatcaggcacaaactgtgaaataaactttgat
gattgctccagtaacccatgtgactatggtatttgcaaagatggcatcaaccgatatgac
tgtgtttgcaaacctggcttcaccggttccaagtgtaatatggagatagatgagtgctca
tccagcccctgtagaaatggggggacatgtgtggatgaagagaatggatttcactgccag
tgtccagagggctttaagcctccatactgttactcccaggtggacgagtgtggcagtagc
ccatgtgtccatggctcatgcagggatgacattaatgggtaccgctgtgactgtgagcct
ggatgggtcgggaagaactgtgatctagacaggaacgactgtttgccgagtccctgccag
aatgctggcacatgcatcgaccagctcaatggcttcacctgcaagtgtcgccaaggcttc
agaggtaacctatgccagatgaacatcaacgaatgtgcttccagtccctgtctgaacaag
ggcacttgtgtggacggtgtagcaagcttcacctgtctgtgtgagcttccttacaatgga
cccacttgtgctgaggtcctcaccccttgctcccctaacccctgtgccaatcatgccctc
tgcacacacacaccagattacttgggctatcaatgcaactgtcagacaggttggcaaggt
caattgtgtaatgtggatgtaaatgaatgcatctccaacccctgcaagaatcgtgggacc
tgcactaacacacttggaggctttgtgtgctcctgcagagctggatttactgggctgaca
tgtgaaacagacgtcaacgactgtactcctaatccatgcctaagtggaggttcctgcaca
gactctgtgaactccttccactgtagctgcttggcaggcttcactgggccccgctgtgct
ttagagatcaatgaatgccagagttcgccgtgcaaaaatggaggcacatgcacagactat
gttaactcctacacctgcacctgcaggccgggctttactggcaaccactgcgaaaccaac
atccctgattgcaccgaaagctcttgtttcaatggaggttcctgcacagataagatcaac
ggctattcctgtaactgccgctcaggcttcactggctcccactgccaatatgaggtcaat
gagtgtgactcccagccctgcctcaatgcaggcatctgtcaagatgccctagagtccttc
cgctgctcctgccccaagggctatactggctcacgctgccagacacctgtcgattggtgc
agacgctcatctacctgccagaatggaggacgctgtcgccaaaaggatgcttccttcacc
tgtgaatgtactaacggttggtctggacgttactgtgacatctccagggtctcttgtgag
acagctgcacgccaaagagggctccagacagatgagctgtgccaccatggtggtcactgt
gtcaacactgggaattcccactattgtaaatgccccactgactacacaggaagctattgt
gaaagccaggtagaccactgtgaagacaaaccctgccgcaatggcgccacctgcagggga
tatgtgggagggtaccagtgtgactgtatgccaggatttacgggacagaactgcgagata
gagatcaatgagtgccaatctcatccttgccagaatggaggcacttgcattgatctggtg
ggacattatatctgctcctgtccgcctggcacacttggtgttctctgtgagataaatgaa
gatgactgtgctctacctctgaggctgcgcagtgctcctcctaagtgccttaacaatggc
acctgtgtggacagagtgggtggataccgctgcaactgtccccctggatttaaaggagaa
agatgtgagggagacataaacgagtgtctctccaacccctgcagtccccccaacagtctt
gactgcatacaattgccaaatgactaccaatgtgtctgcaaacctggattcactggccga
aagtgtcagaacagtttcagtgtgtgtgagtctcaaccttgtcagagtggaggagtgtgt
tctgtatccagcagctctgcaatgggatacacctgcacatgtcagcttggttatgctggg
cttaattgtgaaagaatcatgtcctgtcgggagctgccctgctaccatggtggtagctgt
gcactcacccaaaggggggtgcgttgcacctgccatccaggttacggtggaccccagtgc
cagcatcgcagcaatgaaggctgctcctccaagccctgccagaatggagggttgtgcact
gaagaaacaagcttcccatactttcactgccagtgtcccagtggctggacaggaaaacgg
tgtgagcaggacatcatgccaaacaagcctcaagtacccatatgccctctagcagactgt
cgtagcaaagccaaagatggtgtttgcgacaaggaatgtaacactttcttttgtgactgg
gacggcggggattgttctcttacatcaaaaaacccctgggctcaatgttcacaatgttgg
agtgtctttaacaacagccagtgtgatgagtcctgcaacaacgctgattgtctgtatgac
aactttgactgcatgaacaaggagaaagtttgcaatccagtgtatgaagcctactgtata
gaccactacgctaatggagagtgtgaccccggctgtaactcagtggagtgtggctgggat
ggtttggactgtgcaaagaaggttccagaagtccttgctgacggtgtcttgattttggta
gtcctacttccccccgaggagcttcaacgcaccagcacagcttttctgcagaaattaagt
gctatcctacacacctcactgcgattccagctggacgggaatggagatgccaagatccac
ccatacactcgcggggcacgcctcaagcgggagctgcagcctaaacaggaggtcatcgga
tccatagtgtacttggaaatagacaaccgtctgtgcgccgctcagagctctgagggctgt
ttcccgtcagctgaaagagctgcagactacctgggagctctgtcagctgtagaaatgctt
cgtttcccatacccaatcaaagaagccgttggtgttgaaagggatccccctcctgaccca
atacctcaatgggccaagctgatgctggttgggttagcttcccttttccttatggtcatc
ctggtgctaggaatgttgattgctcgtagaaagagagaacacagtaccctttggttccct
gagggcttcttcttaaagaaggaacccagcagcaacaaaaaccgcagggaacctgtgggt
caggatgctcttggaatgaaacacatggcaaaaactgcggaagaatctctccttggtgat
cacagtgaccagtggatggacacagactgtccagaggcaaaaaggcttaaggttgaggag
ccaagtatgctctcagacagtgaagatgcagtggactgcaggcagtggacacagcatcac
ctcgcagctgcagatattcgtgtgcctcccactatggccctcaccccaccccaaggagaa
tttgaaagtgactgcatggatgttaatgtccgaggcccagatggttttacacctctgatg
ctggcatcattctgtggaggcggcttagagcctgaggtgacagaggaggaggagagtgag
gagtgttctgccaacatcatctctgacctaatctaccagggagcttccctagctgcccaa
accgaccgaactggggagacagcgctccacctggctgctcgctacgcccgtgctgatgct
gctaagaggctgctggatgctggtgcagatgctaatgctcaggataacaccggtcgctca
cctctacatgctgcagtggccgcagatgcacagggggtcttccagattctgatccgaaat
cgggctacagatcttgactcccgtatgtacgatggctccactgcgctgatcctggcagca
cgactggcagtagagggcatggtagaagaactcatcacttgtcatgctgatgtcaatgca
gtagatgaattgggtaaatccgccttgcactgggctgcagccgttaacaatgtggaggcg
actgttgccctgctgaagaacagtgcaaacaaggacatgcaggatctcaaggaggagacc
ccactgttccttgcagctcgtgagggcagctgtgaggctgtgaaggttctgctggctcac
tttgcaaacagagagatcacagaccatatggacaggttgccacgggacattgctcaggag
cgtatgcaccacgatattgtgcagcttcttgatgagtacaacacagtaagaagcccccag
ggccatggagggattggacaccacctctctggggtacactctctgtctcctctcatgtgc
cctccgggcgcctacatgcctagtctgaagaacaccccacagggcaagaagaaccgcagg
ccttgtgctaagggttctagcctgggaggccaacatgctgccagcctgaaggagtcagtc
aaggcccgtaataaaaagctgaccttggacatgcagagtgccttactggagagctctgtt
accctttccccggtcgattcactggactcaccccacgggggggctagcaatgctggctac
atgaccaaccccacttcccctgtggcaatgcagtcaccagggctctaccacacatctatg
tctgtcccaaacacccccatgatacatagtagcatgttggatggtagtggcccctttgca
gtgtctctagcccaactcaatgagctaggatctggaggaatgtccttgcagggacgtgtc
tccatggcttcagatgtaaaccatggctatgtgatgagttcaggccagatggggctcaac
atgggcttggtcagtcctgtgagtgtgccctttgactggcacagccggatgtcttcctct
cagtgtggtcagcaggttttgaatcttgtgcagagtggccaggcaggcatgcacccccag
agcccagccatgcagcagcagaccatgctgatgcaccagcagctctaccgtaacgccatg
ctgcagcccacacctgttacttcaacacccaccatcagcccagtcaagctgccctccatt
gctgagcagcagcagcagcagcaacagcagcagcagcagcttctcaaccacaccatcgcc
aaccagcagaacatggcccgcattggcacctcttccccaccgactcctcagacctcccag
ccgccaccatccttcttccagcagcagcagatgccccagcaaccctctcagccccagctt
ccagctcagcccccccaggcagcccccccagcagcccagccctctcaggctctgccctcc
cagcatagtggcagcactgcaggaacggaggattaccctacacctccctctcagcacagc
tactcatctgcactagatgccacgcccaagcattacctccatttgcccagtgagcacccc
tacctgaccccctccccagagtctccagagccctggtccagcccctctcctcactgcgtc
tctgattggtcagattctacaccaagcccagcagtagctggccctgcccagacccaaatt
tctcaaatcccagaggcaaatggcaagatgcaggtgtttgcgtaa
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integrated database retrieval system
