Notothenia coriiceps (black rockcod): 104952776
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Entry
104952776 CDS
T04920
Name
(RefSeq) Down syndrome cell adhesion molecule-like
KO
K06767
Down syndrome cell adhesion molecule
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncc04515
]
104952776
Cell adhesion molecules [BR:
ncc04515
]
Immunoglobulin superfamily
DSCAM family
104952776
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
V-set
fn3
C2-set_2
Pur_ac_phosph_N
C1-set
V-set_CD47
Sp38
Motif
Other DBs
NCBI-GeneID:
104952776
NCBI-ProteinID:
XP_010777953
UniProt:
A0A6I9NSR1
LinkDB
All DBs
Position
Unknown
AA seq
1089 aa
AA seq
DB search
MWILAFIFFQSILNVFSEDLHSSLYFVNASLQEVVFASTTGTSVPCPAGGAPPASLRWYL
ATGEEIYDVPGIRHVHPNGTLQIFNFLPSSFSKLIHDNTYYCTAENPSGKIRSQDVHIKA
VSREPYTVRVADQKAMRGSVAVFKCIIPASVEAYVNVVSWEKDTVSLNSGQRYLITSTGA
LYILDVLPEDGLNNYRCTTRHRYTGETRQSNSARLIVSDPTNAEPGILDGFDHREVTINH
RVELPCKASGYPTPKYRWLKDNSPLEPDNRFRQTITGLLIESTQPSDSGTYVCEVWNSYG
NAEVMGRLYIKQPLKAVVSPRKVKGSVGSKVSLSCSVSGSDEYELSWYRNGEIIYPGNNV
RFTGLNRESLIMEGMSKSDGGAYQCFARKGKMSAQDFVQVILEDGTPKILASFSEKVVNP
NEPVFLVCNVKGTPPPRCTWSLDDDPVIKDSHHHLGHYETHEGHVVSQLNVTHTQVQDGG
VYRCTCSNSAGLVYHQARINVRGRANIRPMKNITAIAGRDAFIHCRVIGYPYYSIKWYKN
SALLPFNHRQRAFENNGTLKLTNVQQVDAGEYNCKVMVQPNKMDSQSVHLCVRVPPYIQP
FEFQRFTIGQRVFIPCVVMSGDRPLDITWQKDGRPIPISLGVTVDNIDFTSSLRISNLTP
DHNGNYTCVARNEAAAVEHQSQLIVRGAGVPQFQPIPLNSGSRVTLLSNGSLLIKHVLED
DSGFYLCKVSNDVGADVSKSMYLTVKRTPDTHIRGPPKXDQRPNILCEKRGSRGTNPKRG
HSASRVVTVKEVADEVVSTLVIMPTVRGDSGFFSCHAINSFGEDRGIIQLTVQEAPDPPE
VEIREVKDRTIALRWTMGFDGNSPITGYDIECKNKSASWLSAQVTKDVSPQLNQATIIDL
HPSSTYNIRMVAKNIIGNSNPSNELTITTDEAAPDGPPQDVLLEPTSPQSIKVSWKPPQK
HLQNGVIRGYQVGYREYSPGGSHQFTILSLDTSGDTMESIMLDNLKKFTQYSVVVQAANR
AGTGPSSQQVVVKTLEDGKYTTKSPSQQVPSSQTFPTQQLQPWSNTVSLSPVLCCTPPPC
FSGFPAHCL
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgtggatattggcttttatctttttccagagcatcttgaatgttttcagtgaggaccta
cattccagcttatactttgtcaatgcatctttgcaagaggtagtatttgccagcaccaca
gggacctctgtgccctgtcctgctggtggcgcgccccctgcctcgctacgctggtatctg
gcgaccggcgaggagatctacgatgtccccggcatccgccacgtccaccccaatggaacc
ctccagatcttcaacttcctgccatccagcttcagcaagctgatccacgacaacacgtac
tactgcactgccgagaacccctccggcaagatcaggagtcaggatgtccacatcaaagct
gtatcacgggaaccctacacagtccgagtggccgaccagaaggccatgagaggcagtgta
gccgtcttcaagtgcattatccctgcttctgttgaggcctacgtcaatgttgtatcatgg
gagaaagacaccgtttcactcaactcagggcaaagatatctcatcacctccacaggagcc
ttgtatattctggacgtcctgcctgaggatgggctgaataactaccgctgcacgacccgc
caccgctacaccggcgagacgcgccagagcaacagcgcccgtctcatcgtgtcagacccc
accaatgctgagccgggcatcctggatggctttgaccacagagaggtgacgatcaatcac
cgggtggagctgccctgtaaggcctcgggctacccaacgcccaaataccgctggctgaag
gacaacagccctctggagcccgacaaccgcttcagacagaccatcaccgggctgctgatc
gagagcacgcagcccagcgactccgggacatacgtctgcgaagtgtggaacagctacggc
aacgctgaggtcatggggcgcctgtacatcaaacagcccctgaaggcggtggtcagcccc
cggaaggtgaaaggcagcgtgggtagcaaggtgtctctgtcctgcagcgtgagcggatca
gacgagtacgagctgtcgtggtaccgcaacggggagatcatctaccccggaaacaacgtg
cgcttcaccgggctcaaccgggagagcctcatcatggaaggcatgtccaagagcgacggg
ggggcgtaccagtgcttcgccaggaaaggaaagatgtccgcacaggacttcgtgcaagtc
atcctcgaagatggtactccaaagatcctggcctcgttcagcgagaaggtggtgaacccc
aacgagcccgtcttcctggtctgcaacgtgaagggcacgcctcccccccgctgcacctgg
tctctggacgacgaccccgtcatcaaggactcccaccaccacctgggccactacgagacc
cacgagggccacgtggtcagccagctgaacgtcacgcacacccaggtgcaggacgggggg
gtgtaccggtgcacgtgcagcaactcggccgggctcgtgtaccaccaggctcgaataaac
gtaagaggccgagccaacatccgcccgatgaaaaacatcacggcgatcgctggacgagac
gcgttcattcactgccgtgtgattggctacccttactactctataaagtggtacaagaac
tctgcactgctgccgttcaaccaccggcagcgagcgttcgagaacaacggcacgctgaag
ctgaccaacgtgcagcaagtggacgccggcgagtacaactgcaaagtgatggtccaaccc
aacaagatggactcccagagcgtgcacctgtgcgtcagagtccctccctacatccagccc
tttgagttccagcgcttcaccatcgggcagcgcgtcttcatcccctgcgtggtcatgtcg
ggcgaccgccctctggacatcacctggcagaaggacgggcgtcccatccccatcagcctg
ggcgtaaccgtggacaacatcgacttcaccagctcgctgcgcatctccaacctgacgccc
gaccacaacggcaactacacctgcgtcgcccgcaacgaggcggctgccgtggagcaccag
agtcagctcattgtgagaggtgcgggtgtccctcagttccagcccatccctctgaacagc
ggctctcgagtgacgctgttgagcaacggctctctgctgatcaaacacgtgctggaggac
gacagcggcttctacctgtgtaaggtcagcaacgacgtgggagctgatgtcagcaagtcc
atgtacctcaccgtcaaaagaacaccagatacccatataagggggcccccaaagaangac
cagaggcccaacatactatgcgagaagagagggtcgcgtggtactaacccgaaaagaggg
cactcggctagtcgagtggtcaccgtcaaggaggtggccgacgaggtcgtctccacgctg
gtgattatgccgactgttcgtggggactcaggtttcttctcctgtcacgccatcaactct
ttcggggaggaccgaggcatcatacagctgacagtgcaagaagcccccgaccctccggag
gtggagatccgggaggtgaaggaccggaccatcgctctgcgctggaccatgggcttcgat
gggaacagccccatcacaggatatgatatcgaatgcaagaacaaatcagcgtcatggcta
tcagcccaggttaccaaagatgtttcccctcagctcaaccaggccacaatcatcgacctc
cacccttcgtccacctacaacatccgcatggtcgccaagaacatcatcggcaacagtaac
cccagcaacgagctgaccatcaccactgatgaagcagcccctgacggccccccacaggat
gtccttctggagcccacctccccacagagcatcaaagtttcctggaagcctccacagaag
caccttcagaacggggtgatccgcggctaccaggtgggctacagggagtacagcccgggg
gggagccaccagttcaccatcctcagcctggacaccagcggagacaccatggagagcatc
atgctggacaacctgaagaagttcactcagtacagcgtggtggtgcaggcggccaacagg
gcgggcaccgggccgtcctctcagcaggtcgtcgtcaaaaccctggaggacggtaaatat
acaaccaagtctccgtctcagcaggtcccgtcctctcagacttttccaacccaacaactc
caaccctggtccaacaccgtgtctctctctcctgtcctgtgttgcacacctcctccttgt
ttctctggcttccctgctcactgtctgtga
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