Notothenia coriiceps (black rockcod): 104954166 Help Entry 104954166         CDS       T04920                                  Symbol rif1 Name (RefSeq) telomere-associated protein RIF1   KO K11138   telomere-associated protein RIF1 Organism ncc  Notothenia coriiceps (black rockcod) Brite KEGG Orthology (KO) [BR:ncc00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:ncc03032]     104954166 (rif1) DNA replication proteins [BR:ncc03032]  Eukaryotic type   DNA Replication Termination Factors    Other termination factors     104954166 (rif1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  CarD_C Motif Other DBs NCBI-GeneID:  104954166 NCBI-ProteinID:  XP_010779538 UniProt:  A0A6I9NXM3 LinkDB All DBs Position Unknown AA seq 1603 aa AA seqDB search MGFSYGDEISLSVTADRRQMSHNNNNNSAEKRASGAERDNNEPLKHPLLSGSSSFTKHAT VLTFNLRDGFINIGKDAPDSLLSVLWTNLVRFVNLSIESAGSKKDRHGGEVLTLMLLALQ SIVDSEALPAAKVLILLEATVKGIPQRVLGSASYQVGKMDVLNGTPALFLVLLLYNSSML SAYIEDERWTKLDFGSLKPPRRGVLDEEASIDFVFIPPETKERVLTEHQKEVKRTKRVDI PAMYNNLDASLDTTVFTQYTQSQEDSSDKLASEQAHKVTDEEATGKVPQEDVETEEDHEV LTKDTQDYASPKALDAMPENHIQEDMIPESRDVSMEDDTISDRAEDLEMQSKEGPSPDIS GSSDLVSGTPQKQNSRRQSFITLEKYAEGKAGSPSSTFTGPLIKTSDSQERSNASKKSSS QVSQTSTSPEPQGSQSSQTGKVKSASPVTDAFESPVRPKDSRKRTEPVKLTVRLASNPTE DEDVIPDTQTEGEDKEITTSTSASEETIPSCQEEESDAALDDSRSSLSETSQSEQRRSGR PRVRPLLPGESPGKHEDKNTLLKRRRSGEEPKSDSSKSSRPKTRSTQAAEEDNGRLRTRA QRDKSESNLTNSKRKAKQKMKLFNNSEDFLEELEPKRRSTRDSSQTDLLADNESQSQGKQ RRRSKASMEKMDSADVVEQADEEKPKKDSQIITPSPQTSAIPQEMEIEEQTNNDIDSQTV QDGEKLEKDFASPQIQGQSQESELIEKPNNEKKDSQIVASPSTNDESGDTTSKTEKSVNE SEVKDQLKTREATDDDLTQGDSQVITPSSSESQSRRRSGRSKASSEATGSESKSENKDPL ERRSRSNSQASLTADGQPEAKKRGRPRKVQEDPSKSSPIPTPESSQSLDTAKSSQGLGRK YLRRTFEVLPVASTESESQEAKEDPPMPKKRGRKPRLSLPSPLTVESKESQITNDMVKGD SDASQKAELQSVEAKADLEDLEKSQNSESLQINTKEQGDPESQMEVDAVDNTKESQSLTA SPRKEQTQVTEMASTQEGDTGDLPSADMPESAGISTEQNQEEFPCDPSVEDTVEPSDELI EKRQVSESSEEKAAEPSEEVAEKQEDDSDSMDQEPPGPAEEPGVVSAEEPGVVSAEEPGV VSAEEPGVVAAEEPEFVAAQEPEFVTAEDLDVVPAEEEAEDCDTTFGEQVSTKCQNVIDE EQSASSKEGESTYQHTEYTSAESAILERQYEEESRALHSLNDVVANLDAALAQVSPAKQK DLEALMAADLGQSPSSRTRGTWSPTASPSTSILKKGLKRPLEDETPSPIIKSRRVSFANP IHHQEIADDIDRRSPALRTSSPRRNKGSCIPQPKYVTTPTKGLLFLSPRNLHSPGYKSSK KCLISEMSKDRPVSKDCIYPALVGCSAPVEAVLPQISSSMWSRGFGQLVRARNIKTVGDL SALTPAEIKTLPIRSPKISNVKKALKNYEQQRKGRGFDELKSLDDLEMMTSELEETSAPQ NQDEDDKTSETLATALIDEPIPADGPMEEDCPKNLTPDTPAGEHTPAGRLQAEVEALSCS MTPQELNNCSSQQLVQIHDQLSGMMRSVVVELQTRICEKEDKR NT seq 4812 nt NT seq  +upstreamnt  +downstreamnt atgggtttttcttacggagatgaaatttctctctccgtcactgctgacaggagacagatg agtcacaacaacaacaacaactctgccgagaaaagagccagcggagcggagcgcgacaac aacgagcccttgaagcaccctctcctctctggttcttcctctttcactaaacatgccact gtgctcaccttcaacctcagagacggattcatcaacatcggcaaggacgctccagattct cttctctccgtcttatggacgaatctcgtccggtttgtcaacttatccatagagtccgca ggcagtaagaaggatcgtcacggaggggaagtcctgactctgatgctcctggctctgcag agcatcgtcgactcagaagctctgccggcagccaaagtgctgattctcctcgaggccaca gtgaaaggtattcctcagagagttctgggctctgcatcgtatcaggtcggcaagatggac gtgctgaatggaacgccggctctgttcctcgtgcttctcctctacaacagcagcatgctc tccgcctacatcgaggacgagaggtggacaaagcttgactttggctccctgaagcccccc cgcagaggagttttggacgaagaggcctccatcgacttcgtcttcattcctcctgagacc aaggagcgagtgctgactgagcaccagaaggaggtgaaaaggacaaaaagggtcgacatc cctgccatgtacaacaaccttgatgcgtctctggatacgacggtgttcacccagtacacc cagagccaagaggactcttcggacaaactggcatctgaacaagctcacaaggttacagat gaggaggctactggcaaggttcctcaggaagatgttgaaacagaggaagaccatgaagtt ctaaccaaagacactcaagactatgccagtccgaaagcgttagatgctatgcctgaaaac catattcaggaagatatgattcctgagtccagagatgtttctatggaggacgataccatt agtgatagagcagaagacttggaaatgcagtctaaagaaggcccaagtcctgacatctct ggttcttcagatttggtctctgggactcctcagaaacaaaacagtcgccgtcagtccttc atcactctggagaagtatgctgaggggaaagctggtagtcccagcagtactttcacaggt cccctaataaagacctccgatagccaagaacgctccaacgccagcaaaaagtcgtcgtct caggtttcacagacatccactagtcctgagccccaaggttcccagtcctctcagacaggg aaagttaaatcggcgagtcctgtgactgacgcttttgagtcccctgtaagaccaaaagac tctagaaaaagaactgagccagtaaagctgactgtgagactggccagcaacccaacagag gacgaagacgttatccccgacacccagactgaaggggaggacaaagaaattacaacaagt acctcggcatcagaggaaacaataccctcatgccaggaagaggaatctgatgcagctcta gatgattctcgttcttctctgtctgagacttctcaaagcgaacaaagacgttctgggcgc cccagagtcagacctctgctgcctggagagagccctgggaaacatgaagataaaaacacg ctgctgaaaaggcgacgttctggagaggaacctaaaagtgattcttcaaagtcgagcagg ccaaagacaagaagtacacaggctgctgaggaggacaatggcagattacgaacgagggct cagagggacaagagtgagtcgaacctaaccaactctaagagaaaagcaaagcagaagatg aaactgttcaacaattcggaggacttccttgaagaacttgaacccaaaaggcgaagcacc agagactccagccaaactgatttgctggctgataacgaaagtcagtcacagggtaagcaa aggcggaggagcaaagcatcgatggagaaaatggattcggctgacgttgtagaacaggcc gatgaggaaaagccaaagaaagattctcaaataatcacaccttcccctcaaactagtgcc ataccccaagagatggagattgaagaacagaccaacaatgacattgattctcagactgta caagatggtgaaaagctagaaaaagacttcgcttctcctcaaattcagggccaatcccaa gagtccgagcttatagaaaagcccaacaatgaaaagaaagattctcagatagtcgcttct ccttcaactaatgacgagtccggagatacaacaagcaagacagagaagtcggtgaatgaa tcggaggttaaagaccaacttaagacaagggaagccacagatgatgaccttactcaaggg gactctcaagtgatcaccccctcatcttctgaaagccagtctcggcgcagatccggaaga agcaaggcatcatctgaggcaacggggtctgaaagtaaaagtgagaataaggatccatta gaaaggcggagcaggtctaattctcaggcttcactgacagctgacggtcagccggaagcc aaaaagagaggtaggcccagaaaagtacaagaggatccctcaaagtcgagtcctatccca accccagaaagttctcagtctttagataccgccaagtcctcccaaggccttggacgcaaa tacctacgtagaacttttgaagtgttaccagtcgccagtacagagtctgaaagccaagag gccaaagaagatcccccaatgcccaaaaagaggggaaggaaacctcgactgtctcttcca agtcctctcaccgttgaatctaaagaaagccaaattactaacgacatggtaaaaggtgat tctgatgcttctcaaaaggcagaattacaaagtgtagaagctaaagcagacttggaggat ttagagaaatcgcagaattctgaatcgctccagataaacactaaggagcaaggtgaccca gaatcacagatggaggttgatgctgttgacaacacaaaggagagccaatcgctcaccgct tcacctcgcaaggagcaaactcaagttactgagatggcctctacacaggaaggggacact ggagacttgccctctgctgatatgcctgaatcagctggaatcagtactgaacagaatcaa gaagagtttccatgtgacccttctgttgaggacacagtggagccctctgatgagttgata gaaaaacgccaggtctccgagtcttcagaggagaaagctgctgagcctagtgaggaagtt gcagagaaacaagaggatgattcagattcaatggatcaagaacctccaggtccagccgag gaaccgggtgtcgtttcagccgaggaaccgggtgtcgtttcagccgaggaaccgggtgtc gtttcagccgaggaaccgggtgtcgttgcagccgaggaaccggagtttgttgcagcccag gaaccggagttcgttacagccgaggatctggatgtcgttccagcggaggaagaagctgaa gactgtgacactactttcggtgaacaagtctccaccaagtgtcaaaatgtaatcgatgaa gaacagtccgcctccagcaaagaaggcgaatcaacataccagcacacagagtacaccagt gcagaaagcgccattttagagcgtcagtacgaagaggaatctcgagccctccacagtttg aacgatgttgtcgcaaatttggatgctgctctggctcaagtttctccagcgaagcagaag gacctggaggctttaatggcggcagatctcggccaaagccccagcagcaggaccagagga acctggtctcctacagcctccccatccacaagtatccttaagaagggtctgaagagaccg ctcgaggatgagactccctcacccattatcaaatcgaggcgtgtgtcttttgctaatccg atccatcatcaggaaattgcggacgacattgatcgtcgcagccctgcgctcagaaccagc tccccgagaagaaacaaaggcagctgtatccctcagccaaagtatgtcacgactccaaca aagggcctgctgttcctgagtcccagaaatctgcacagtccaggctacaagagctccaag aaatgcctgatttccgaaatgagcaaggatcgtcccgtctccaaagactgcatctaccct gctctggtcggctgctcggcgccagtagaagctgtgctgccgcagatctcctccagcatg tggtctcggggtttcgggcagctggttcgagccagaaacataaaaactgtcggcgacctg agcgcgctcactcccgcggaaatcaagactctaccaattcgctccccgaagatctccaac gtcaaaaaggcgctaaagaactacgaacaacaacgtaaaggacgaggctttgatgagttg aagagtttggatgacttggagatgatgacctctgaactggaggagaccagtgctcctcag aaccaggatgaagacgacaagacctcagagacgctagctacagcgctgatagacgagccg attcctgctgacggtcccatggaggaagactgccccaaaaacctgactcctgacacacct gccggagaacacacacctgcaggacggctgcaggcggaggtggaggctctgagctgcagc atgacaccacaggaacttaataactgctcctctcagcagctagtccagatccacgatcag ttatcgggcatgatgaggagcgtcgtggtcgagctgcagacgcgaatctgcgaaaaagaa gacaaacgctga

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