Notothenia coriiceps (black rockcod): 104956504
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Entry
104956504 CDS
T04920
Symbol
fyco1
Name
(RefSeq) FYVE and coiled-coil domain-containing protein 1
KO
K21954
FYVE and coiled-coil domain-containing protein 1
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104956504 (fyco1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncc04131
]
104956504 (fyco1)
Membrane trafficking [BR:
ncc04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
104956504 (fyco1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RUN
FYVE
GOLD_2
Motif
Other DBs
NCBI-GeneID:
104956504
NCBI-ProteinID:
XP_010782285
UniProt:
A0A6I9P461
LinkDB
All DBs
Position
Unknown
AA seq
1466 aa
AA seq
DB search
MASSSSVGDNQLQRIIRDLHDSVLELSKEHNDCGEPVTDDSANLHKFFYKLEYLLQFDQK
EKTTFLGQRKDYWDYFCDCLIKIKGANDGIRFVKSIPELKTSLGKGRAFIRYSLVHQRLA
DTLQQCLINQKVTSDWYYARSPFLKSHLTADIINHLYELNQIQFDVAARGYDLDADWPSF
ARRTLGNASSAFLWRPPSRCSSINSLVSSYSQVQEYLPIQDLNPSLLGGLDELVEPSSCS
IADNLRIELDQSELRQQELLVRVQELGKQADELKGVVKDLKGQLLQKTAGPSVSTETQSN
QHTDDQDGANHLQICREAINSDLQSRLTVAENKNMELLSKLEESLKEKGQQTASYCDSAW
TIQELLDKVKTAEEGRLEAKREAEDRARHSERLSQDLKLREEEMRISEEKLAEVRTGAHC
EREDALKRLEELQSAVGRIQGALSLKEKETGNLRAQLQDLQASLECRERKADDLRRRLNK
EREEVEQRCSVSYSQNEDLESKLLDVMRTLKNREKELAATSERTKHLEEQLEKLNVEKET
LGSRLANNETVSSEKLQEYKTQCHNLMEINAKVLQTVKKSEGSITELTESRVALLDQLAC
LRASEKHLKSRVEAAHLCVEDREKKLLDENLHWEEIAQKVLVQKDTSDAQIKNLEHEKQE
RLELQSSLKKQLATAQQELDALAAKASKLEKNLNVSQRSQAELLEKVKDAEAKLREQAVE
CGRQRARAEELENRSVELLHREKGAAESNEKVLHERPQKSSMETKDSPYRLVMAEAQLEL
NLREVQRLQDEVVELRAQRLAGADERMKVQALQEVTESSREDLRILAEQLKAQVEELNRR
HVDEILRSREREEAVVRERDGEAQARAGLAAEVTASREDLNKLKLRYEGLCLENSESKEA
LHRANTETAELGIQVCMLTAENEEARLRWEGLSTKLQELDEERLNTCMEQLSQENQRLNQ
KGPPAIKQEMQEELSKAQQEAVQATSQEEIQALRFQLSSQTMSHEGRVQTVNKDTQEVKS
QLTTEQEKVVDLENKFKQLEAENQRYCQQIEEKNIQMADSVNLIRQKEDEIIHLKENLSS
SQESLAAAQRTCQEMSENLRRATQDKQSFDLKTAAELDDLYRTKINLEERLVELIREKDV
LWQKSDALEFEQKMRDEETERDVNFCLGCHTQFSWWLRKHNCRLCGRPFCYYCCSNTVST
QQGGHRERCCIDCYNNHTAVVERHPQEEVTPSTPGTPFHRLLQAGRAVTGASGASEGEKV
DDGIFDIITEEEVSGVYDSDSLSFATACSPEHGQQGAAQLNSSASAGDLTSEDNDDLNTS
VQDAEICLLKSGDLTLSVPFTVDDISAFGDSSRELFIKSSCYSTIPITMSGPGPTVCWTF
TSEPKSIAFSVVYRESTETPLEQAKVLIALTRCNSHKETIQGELKVRNAGEYTLIFDNSF
SRFISKNVQYQLSLDKPVVYDGTDLL
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcctcatcagttggagataatcaactgcagaggataattagagatctgcat
gattctgtgttagagttgagtaaggaacacaacgactgtggtgaaccggtaactgatgat
agcgccaacctgcacaagttcttctataaacttgaatacctgctccagtttgaccaaaaa
gagaagacaacctttcttggtcagagaaaagactactgggattacttctgcgactgcctg
attaagatcaagggagctaacgatggcatccgttttgttaaatccattcctgagttgaag
acatccctggggaaaggaagggccttcatacgctactcactcgtccaccaacgcctcgct
gacacactgcagcagtgtctcataaaccagaaggtcacaagtgactggtattatgcgcgc
agtcccttcctcaagtcccacctcactgctgacatcattaaccatctttatgagctcaac
cagatccagtttgacgtggctgccagaggttacgaccttgatgcagattggccatcattt
gcaaggcgaacattaggcaatgcctcatcagctttcctgtggaggcctcccagtcgctgc
tccagcatcaacagtctcgttagcagctactcacaggtgcaggagtatcttccaatccaa
gacctgaatcccagtctcctgggtgggctcgatgaactggtggagccctcttcatgcagc
atagcagataacctgcgcattgagctcgaccaatcagagctcagacagcaggagctgctg
gtccgggttcaggagttaggaaaacaagctgatgagttgaaaggtgtggtgaaagacctt
aaaggccagcttttgcagaagactgctggcccctctgtatctacagaaactcaaagtaac
caacatacagatgatcaggacggggcaaatcaccttcaaatctgtagggaagcaataaac
agtgaccttcaaagtagactcacagtggctgagaacaaaaatatggagcttctctccaag
ttggaagaatcacttaaggaaaagggacaacaaacagccagctactgcgactcggcctgg
acaatccaggaactcctggataaagtcaagacagctgaggaggggaggttggaagcaaag
agagaggcggaggacagagcaaggcactctgagcgtctgtcccaggatctgaaactcagg
gaagaagagatgaggatcagcgaggagaagctggctgaagtaagaaccggagctcattgc
gaacgcgaggacgcgcttaaacggttagaggagctccagagtgccgtcggtcgaattcaa
ggggcgctgagcttgaaagagaaggagacggggaacttaagagcacagcttcaggaccta
caagcgtcactagagtgcagagaaaggaaggcggatgacctaaggagaagactgaataag
gagagggaggaggtagagcagaggtgtagcgtgagttacagccagaatgaggatctggag
agcaaactcctggacgttatgagaactctgaagaacagagaaaaagagctcgctgctact
tcggagagaaccaaacatttagaggagcagttggagaagctgaatgttgagaaagagact
ctgggctctagacttgctaataatgaaaccgtctcctctgagaaacttcaggagtacaaa
acccaatgccacaatctcatggaaataaacgctaaggttctccagacggttaaaaagagt
gaggggagcatcacagagctgactgagagcagggtggccttgttagaccagcttgcttgt
ttgagggcttctgaaaagcacttaaaatcccgagtcgaggctgcacatttgtgcgtggaa
gatcgggagaagaagcttctggatgaaaacctgcattgggaggagattgcccagaaggtg
ctcgtccagaaggacacatctgacgcgcaaataaagaatctagagcatgagaaacaagag
cgtcttgaactccagtcctcgttaaagaaacagttagcgacggctcaacaggaactggac
gcactcgctgccaaagcttcaaagttggagaaaaacctcaacgtgtcccaaagaagccaa
gcagagttacttgagaaagtgaaggacgctgaggctaaactgagagaacaggctgttgaa
tgtgggcgtcagcgagctcgagccgaggagctggagaacaggagtgttgagctgctgcac
cgtgagaaaggagctgcggagagcaatgagaaagtgcttcacgaaaggcctcagaaatcc
tcaatggaaaccaaggattccccgtacaggctggtgatggctgaggctcaactggagctc
aacctgagggaggtgcagcggctccaggacgaggttgtggagctcagggctcagcgtctg
gcaggagccgacgagaggatgaaggtgcaggctctgcaggaggtgaccgagtcctccaga
gaggacctccgcatcttagcggaacaactgaaagcccaggtagaggagctcaaccgccgg
catgtggacgagattctgcgatcgcgggaacgagaggaggctgtcgttcgggagcgggac
ggtgaagcccaggctcgagccggcctggctgcggaggtgacggcctccagagaggatctc
aataaactgaagctgcggtatgaaggcctgtgtctggaaaacagcgagtccaaggaggcg
ctccacagagccaacacagaaacagctgagctcggcattcaggtgtgcatgctaacggct
gagaacgaggaggctcgtctgcgctgggagggcctgtcgacgaagctgcaggagctggac
gaggagaggctgaatacctgcatggagcagctgagtcaggagaaccagcgcctcaaccag
aagggtccgcctgcaatcaagcaggagatgcaggaggagctgagcaaggcccagcaggag
gctgtgcaggcgaccagccaggaggagatccaggcgctccgcttccagctcagcagccag
accatgagccacgaaggccgggtccagaccgtgaataaagatacacaggaagtgaaatct
cagctgacgaccgagcaagagaaagtggtcgacttggagaacaaattcaaacagctggag
gctgagaatcagagatattgccaacagattgaggagaaaaacatccagatggccgattct
gtaaatctcatccggcagaaagaagacgagataatccatctgaaagagaatttatcaagt
tctcaggaaagtcttgcagcggctcagcggacttgtcaggagatgagtgaaaatctacgg
agagccacacaggacaaacagagctttgatcttaagacggcagctgaactcgatgatctt
taccgcacgaaaatcaacttggaagaaaggcttgttgaactgatcagggagaaagatgtt
ctgtggcagaagtcggatgccttggagttcgagcaaaaaatgcgggacgaggagactgag
agagacgtcaacttctgcctgggctgtcacacccagttcagctggtggctccgcaagcac
aactgcagactgtgtgggcgtcccttctgctactactgctgcagcaacacagtgagcacg
cagcagggcggccacagggagcgctgctgcatcgactgctacaacaatcacaccgcggtg
gtggagcgccaccctcaggaggaagtgactcccagcacgccggggactcctttccatcgc
ctgctgcaggctgggagagctgtgacgggtgcttcaggagcaagtgaaggtgaaaaggtg
gatgatggtattttcgacatcatcactgaggaggaggtgagcggggtctatgacagtgac
tccctctcttttgccaccgcctgctctcctgaacacggacagcagggggcagcacagcta
aacagcagtgccagtgcaggagacctcacatcagaagataatgatgacctcaacacttcg
gtacaagacgcagagatctgcctgctgaagtctggagacctcacgctctccgtccccttc
acggtggatgatatctcagcgtttggggacagctccagagagctcttcataaagtccagc
tgctacagcaccatccccatcaccatgagcgggcccgggccgacggtctgctggacgttc
acctccgaacccaaaagcatcgccttcagcgtggtctacagggagagcaccgagactcca
ctggagcaggccaaggtcttgatcgctctgacgcgctgtaactcccacaaagagaccatc
cagggggagctgaaggtcaggaacgctggagaatacacactcatctttgacaactctttc
tcaaggttcatctcaaagaacgtccagtatcagctgagtctggacaagcctgtggtctac
gatggaaccgacctcctctga
DBGET
integrated database retrieval system
