Notothenia coriiceps (black rockcod): 104956893
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Entry
104956893 CDS
T04920
Name
(RefSeq) nuclear receptor subfamily 1 group D member 1-like
KO
K03728
nuclear receptor subfamily 1 group D member 1
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncc03000
]
104956893
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ncc03310
]
104956893
Transcription factors [BR:
ncc03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
104956893
Nuclear receptors [BR:
ncc03310
]
1. Thyroid hormone like
1D. Rev-Erb
104956893
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
104956893
NCBI-ProteinID:
XP_010782764
UniProt:
A0A6I9NXM5
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Position
Unknown
AA seq
563 aa
AA seq
DB search
MDNSPGGGVILYAGSSGSSSPSPGSPSSGYQTQSPSPHSQPSSPEEVVFTEIGVVKQRAA
SCRTLSSKLVFQFPQLQSAPPAAATPQHTFAHPIAGKRPCGFTGAFTKTGGMVLLCKVCG
DIASGFHYGVHACEGCKGFFRRSIQQNINYKMCVKNESCLIMRMNRNRCQHCRFKKCLSV
GMSRDAVRFGRIPKREKQRLLDEMQSYMNSLNESAAMEMESPSVRETASCTEDGNSKEAI
GEISRAYRDIFTSSNSEERPTKSSNISSNTCPFSQDASFPQVSSHPASIQSYQSYPVVPN
DNTSTFHNVDNNRSSYLVSTNQNQDQSNSTTSQRGSSANHNSFHNAGSSQNQPSCPWKLA
SGAKVLACPLNAWPVSGAECTSQQIWESFSQCFTPAVKEVVEFAKGIPGFQELGQQDQVM
LLKSGTFQVLMVRFCTLFNAEERTVTFLNGQTYPLSTLRALGMGTLLDAMFDFSEKLGSL
GLEPDEMALFMAVVLVSADRSGILDMQAVEQLQEGLIRALRSLITRRRPDENTLFPKLLL
RLPDLRTLNNMHSDKLLAFHIDP
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggataacagccctggtggtggcgtcatcttgtacgcagggtcctccggcagctccagc
cccagccctggaagcccctccagtgggtaccagacccagtccccttctccacactcccag
ccatcatctcctgaggaggtggtcttcacagagattggggttgttaaacaaagggcagct
tcatgcagaaccttatcctccaaactggtattccagtttccacagctccaaagtgctccc
ccagcggcagccactccacagcatacgtttgcacaccccattgcaggaaagaggccatgc
gggttcacaggagctttcacaaagacgggtggaatggtcctgctttgcaaagtctgtggt
gacattgcatctggtttccactatggagttcatgcatgtgaaggatgcaagggtttcttc
cgccgcagcatccagcagaacatcaactacaagatgtgtgtgaagaatgagagctgtctg
atcatgcgcatgaaccgcaaccggtgccagcactgccgcttcaagaaatgcctctctgtt
ggcatgtcaagagatgctgtgcgttttggccgcatccccaaaagagagaagcagcggctc
ctggatgagatgcagagctacatgaatagcctgaatgagtcagctgccatggagatggaa
tccccttcagtgagggaaactgccagctgcacagaagatggcaactcaaaagaggccatc
ggggaaatctccagagcctatcgcgacatcttcaccagcagcaacagtgaagagagacca
accaagagctctaacatctcctccaacacatgtcccttttctcaggatgccagctttccc
caagtgtcctctcaccccgcctccatccagagttatcagtcttaccctgttgtccctaat
gacaacacatccacattccacaatgttgacaacaatcgttcctcctacttggtttcaaca
aatcagaatcaagatcagtccaacagtacaacctctcaaaggggcagctctgccaatcat
aacagttttcacaatgcaggaagctcccaaaaccagccctcctgcccatggaaattagct
tcaggagctaaagtgctggcatgtccccttaatgcgtggcctgtatcaggggcagagtgc
acgagtcagcagatatgggaatccttctcgcagtgttttactcctgctgtcaaggaggtg
gtagagttcgccaagggcatcccagggtttcaagagcttggccaacaagaccaagtcatg
ctgctcaaatcaggaactttccaggttttgatggtgaggttctgcaccttgttcaatgct
gaggagcgtacagtgactttcctgaacggccaaacttacccactgtccaccctgcgggcc
ttaggcatgggcactctgctggacgcaatgtttgacttcagtgagaagttgggctccctg
gggctagagcctgatgaaatggccctctttatggctgtggtcctggtgtctgcagatcgt
tctggcatcttggacatgcaggctgtggagcagcttcaggagggactgatccgtgcccta
cggtcactgatcactcgccgtcgcccagatgagaacaccctcttccctaaactcctcctg
cgcttgccagacctgcgcaccctcaacaatatgcactccgacaaactgctggcctttcac
attgacccttaa
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