Notothenia coriiceps (black rockcod): 104957445
Help
Entry
104957445 CDS
T04920
Symbol
gltscr1
Name
(RefSeq) glioma tumor suppressor candidate region gene 1 protein isoform X1
KO
K25612
BRD4-interacting chromatin-remodeling complex-associated protein
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104957445 (gltscr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncc03036
]
104957445 (gltscr1)
Chromosome and associated proteins [BR:
ncc03036
]
Eukaryotic type
Chromatin remodeling factors
GBAF(ncBAF) complex
104957445 (gltscr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GLTSCR1
Motif
Other DBs
NCBI-GeneID:
104957445
NCBI-ProteinID:
XP_010783379
UniProt:
A0A6I9NZ75
LinkDB
All DBs
Position
Unknown
AA seq
1873 aa
AA seq
DB search
MDDEDGRCLLDVICDPEALNDFLHGSETHLDTDDLLDGSSDPSSSFFSATGGHVPEVQPA
VQLSANEPTGLPRVSVDLDFLEDDDILGGSPGGDGGSNGIGTNHEPCDILQQSLAEANIT
EQSLQEAEGELDLGSFGIPGLTQVVQTLPDAGLSGAGGAAVGVGIGVGGAAAIFPGSAQS
TTATPPNSTADMLGSVLAQQGLQLQSQVMNKAISVQPFMQPVGLGNVTLQPISSLQTLPN
GSQPGHLGIGQIQVVGQPTVMTINQSGQPILAKAMGGYQLHQSGQEVSGAGSQPGLGGSG
GGLLIHGNKAALGSSALNGPAVCVGTTNSSSGGAMTAPAGLLGFGSTTLSSGIGPHTQNQ
GPIMQNVIIQRTPTPIQPKPPQGGAIQPKLFKQQQQQQQPLPQSLQNDAHKALGLQQIPV
TSAQNVAFLTGKHGSNVVLSTQTTTQGSQFQQTLFKQQAAQQSGKPLSLHLLNQQGSIVI
PSQTVLQGQNHQFLLPQLQAGGQILTQHPGGHIITSQGPGGQLIANQILTSNQNINLGQM
LTSQGHPGAHILSGSIQLQSGQMGTPTLFQMPVSLAQSGHTQTHTVSGHGQTVIQGMPIQ
NSLTMLSQVEGLSPAVSLQPALQPQPGGVPSSAGAATMAQGQPGECVTLLGSSTDQAAHP
TQQHATQSSILAMQPVSSVSTVTTVPSSPSMSTSSPVTAMGLVPHQAQHSPGRLLFTNQG
SSMILSQESLQMFLQQEQHLQTENESTPSVGVPASVIVSSNSVTAPAPAVHDSQLTDSWV
GQSHSPSPGPSHMTALVKQVPSSGHQQSLKIQGMCPSPTLTTHVTAPPMAVSPQPSHSPL
TLSQQIQSPHHQQQQSRPPSQPHPQSLTPSRSCTPSAHPQLFIVHNQMAESPQPAQQGQQ
THIQIQLQPQPRPASQPAPYQQDMPPLSQSPKPPPPAPPAQHQFTALPVSTSAPAVVKAQ
VPIQGLTAEQQHHLQLVGAQIQTLSGIAQPSPQQKQLLDKLHQVQQNILLQAKQAAQSQS
QASSQFSSQQDVPVDKVVIAPSAGTGSPAQLLSVLQSTSVLVKTPATASSDLQVFSGAQG
PAGAMVNQTVTPASLTQPAQVQPKPGVISSVGGMSLGKAGMQIQVLGTSLTQMTAPQHLA
PVQTQTPTMKMPFSAEPSKEARMLEQLRKQQGSVLHPNYSAAFHSFEDTLHSLLPYHLYQ
GTANSSQDYQKVDDEFETVSSTLLKRTQAMLDKYRSLLFAESKQRLGPSAEMVMIDRMFI
QEEKIALSQDRILAKERPEEFVANARMLESVVLSQHKSSSSAQTTSASGGLTAAVPAPAP
AAPALLPNITPNPPPAPILAPASAPVPAPIPAPLPAPSASPFPPTKLVIKHGGGGASVSW
SSSCPAPQAAKSRLSEPIGHSSSFSRAHTASSSFSSSSSNAKAADADDDALPQRTSKPPM
KTYEARRKIGLKLKIKQDQTGFSKVVHNTALDPVHTPPSKQSSQSTSQPQTKPQVEAAVP
HPKPNPVATPPTSVIKTQPPVCTASTASSVTPSTTQCNPLRGNVPPNAASFSSTSSSHTW
SSSTSTSSALQMNGTLDNHDQGRVKHNSASTATPSQTTCRLPLRKTYRENISPRVRPGVP
GGGDENLSYPKPTPSPPRHEASSPPSERTVIASVKVEKRGREASHPHTESSHDTGRLGSA
MQGLEEMDEVFNRGIKTQHHHLQPPLDREGAKERGDEHTDQETDVSKYKRASGKNRHRAG
GTFRMDQHAPGPPSPESSFTRDSLLPAKRCKSDSPDMDNASFSSGSPPDDSLNEHLQCAI
DSILNLQQEPTARIKGGGSRSHQSQRPGGSAASSHRPSVPPSSSASSSSSLAQHPQVGGR
GHNGSLVPQTHSR
NT seq
5622 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgaagatggcaggtgccttctagatgtaatctgtgacccagaagctctcaat
gactttcttcatggatctgagacccatttggacactgacgacctattggatggttcgagt
gacccctccagctcgttcttctctgccactgggggccatgttccagaggtccagcctgca
gtccagctgtcggccaatgagccgacaggcctacccagagtcagtgttgacctggacttc
ctggaggatgatgatatcttgggaggatccccaggtggtgacggtggcagcaatggcatt
gggacaaatcacgagccatgtgacatcctgcagcagagcttggctgaagccaacatcaca
gagcaaagcttacaggaggcagagggtgagctggacctgggctcgtttgggattccaggc
cttacgcaggtggtgcagacactacctgatgccggcctctcaggggccggaggggctgct
gttggtgtaggcataggtgttgggggagcagcagcgatttttcctgggtcagcccagagc
accactgctacacctcccaattctacagctgacatgctggggtcagtgcttgcccagcag
ggccttcaactccaatcccaggtcatgaacaaggccattagtgttcagccatttatgcag
cctgttggcctgggaaatgtgacgcttcaacccatttcaagtctccaaactcttcctaat
gggagccagcctggacatttgggtatcggacagattcaggttgtgggtcagcccacagtc
atgactatcaatcagtctgggcagcctatcctggctaaagccatgggtggttaccagctg
caccagtctgggcaagaggtttcaggtgctggttctcagcccgggcttggaggctctggg
ggtggacttctgatccacggcaacaaagccgctttgggatcttcagctttaaatggaccg
gctgtttgtgtcggcaccacaaacagcagcagtggcggtgctatgactgctcctgctggg
cttctgggcttcggcagcaccactcttagttcaggaattggtccccatacgcaaaatcaa
ggcccaatcatgcagaacgtgatcatccagcgcacaccgacacccattcagcctaaaccc
cctcaggggggagccatccaaccgaaacttttcaaacagcaacagcagcagcagcagcca
cttccccaatccctgcaaaatgatgctcacaaggctctcgggcttcagcaaattccagtt
acttctgctcagaatgttgcctttctaacggggaagcatggctcgaatgttgtccttagt
actcaaaccacaacacaaggttctcagtttcaacaaaccctattcaagcaacaggcagca
caacaatctggcaagccccttagcttacacttgttaaaccaacaaggcagcatcgttatt
ccctctcagactgttctgcaaggtcagaaccaccagtttctcctgccacaactacaggca
ggcgggcagatcctgactcagcaccctggggggcacatcataaccagccagggccccggt
ggacagcttattgcaaaccagattttaacttcaaaccagaacataaacttgggtcagatg
ttgacttcacagggccatcctggggcccacatcctctctggatccattcagctccagtcg
ggccagatgggcacacccaccctctttcagatgcctgtctcattggctcagagtggccat
acgcagacccacactgtctctggtcatggccagacagtcatacagggcatgccaatccag
aactccctgaccatgctcagtcaggtggaggggctgagccccgcggtcagccttcagcca
gccctgcagcctcagccggggggggtccccagcagcgccggagcagcaaccatggctcag
ggccagcctggagagtgtgttaccctgcttggtagctccacagaccaggcggctcacccc
actcaacagcatgcaacgcaatcctccatcctcgccatgcaaccggtttcctccgtgtcc
acggtaaccacagtaccctcttctccgtccatgtccacctcttcccccgtcacagctatg
gggctggtcccccatcaggctcagcacagtccagggaggttactgttcaccaaccagggc
tccagtatgatcctgagccaggagtccctgcagatgttcctgcaacaggagcagcacctc
caaactgaaaatgagtcaaccccctctgtgggcgtaccagcgtccgttatcgtcagcagc
aacagcgtcactgctccggcccccgctgtccatgacagccaattaactgactcatgggtg
ggtcagagccacagcccttcccccggcccctcccacatgacagcactggtaaagcaggta
ccgtccagtggacaccagcagtccctgaagatacagggcatgtgcccctcaccgactttg
accactcacgtcacagcgccccccatggcagtcagcccccagccttcccactctcctctc
actctgagccagcagatccagtcaccgcaccaccaacagcagcagtcacgccctccctcc
cagcctcacccccagtctctaacaccctcccgctcgtgcacaccctcagctcaccctcag
ctcttcatcgtccacaaccaaatggcagagtccccccaaccggctcagcaaggccagcag
acacacattcaaattcagctccagcctcagccccgacctgcctctcagcccgccccctat
caacaagatatgcctcccctgtcacagtcacccaagcctcctcctcccgcaccacctgca
cagcaccagtttacggctcttcctgtcagcacttctgcccctgctgtagttaaagcccag
gttcctatccagggcctgacagcggagcagcagcaccatctgcaattagtcggagcgcag
attcagaccctgtcaggcatcgcccagccctcacctcagcagaaacagctgctggacaaa
ctacaccaggtgcagcagaacatcctgctgcaggccaagcaggctgctcagtcccagtcc
caagccagcagtcagttcagctcccagcaagatgtgcctgtcgacaaagtggtgattgcg
ccatcagccggcaccggttccccggctcagctgctatcagtgctgcagtcgacatcggtt
cttgtcaaaactcctgctacagcatcaagtgacttacaggtattctcaggagcccaaggg
ccagctggagcaatggtgaatcagactgtcactcctgccagccttacccagcctgcacag
gttcagccaaagccgggggtgatcagctcagttggagggatgtctcttgggaaagctggg
atgcagatccaggtgttaggaactagtctgactcaaatgactgctccacagcacctagct
ccggtacaaactcagacaccaacaatgaagatgcctttcagtgcagagcccagcaaagaa
gcaaggatgctagaacagctgaggaaacagcagggttcagtgcttcacccaaactacagt
gctgctttccactcctttgaggacacactgcacagcctgctgccttaccatctctaccag
ggaaccgccaattcgtctcaagactatcagaaagtggatgatgagtttgagacggtctcc
agcactctcctgaagaggacccaggctatgctggataagtatcgcagcctgctcttcgcg
gagtcaaaacagagactgggcccctcggcagagatggtcatgattgaccggatgttcatc
caggaggagaagattgcgctgagtcaggacaggattttggccaaggagcgaccagaggag
tttgtggcaaacgcgcgcatgttggagagtgtagttttatcccaacataaatcatcatct
tcggctcagaccacgtcagcgagtggaggtctaacagcagctgtcccggctccagcacct
gcagctcctgcccttctgccaaacatcaccccgaaccccccgcctgcacccatcctagct
cctgcttcagctccagttcctgctccaattccggcaccccttcccgccccttctgccagc
cctttcccccctaccaaattagttataaagcatggtggagggggagcgtccgtgtcctgg
tccagcagctgtcccgcaccccaagctgcaaaaagcaggctgtctgaacccatcggccac
agctcctccttcagccgcgcccacacagcatcatcctctttttcctcttcgtcctccaac
gctaaagcggcggacgccgacgacgacgccctcccgcagagaaccagcaagccaccgatg
aagacctatgaggctcgcaggaagatcggcttgaagctgaagatcaagcaggatcagacg
gggttcagtaaggtggtccacaacaccgccttagaccccgtgcacacacctccatccaag
cagagcagccagtccacatcccagccgcagactaagccccaagtcgaggctgctgttccc
cacccaaagcccaatcctgtagctactccccctacttcagtcatcaaaactcagcctccc
gtatgcactgcttcaactgcctcatcggtcaccccatcaaccactcagtgtaaccccctg
agaggtaacgttccccccaacgcagcctcattttcctctacgtcttcctctcatacttgg
tcgtcgtcaacctccacctcctcggcccttcaaatgaacgggacgttggataaccacgac
caggggcgggtcaaacacaattcggcctccactgccactccctcacagacaacatgccgt
cttccccttcgaaaaacctaccgagaaaacattagtccccgagtccgacccggcgtccca
gggggaggagacgaaaacttgtcctaccccaaacccacgccttcacccccgaggcacgaa
gcctcatcccctccctcagagcggacagtaatagccagtgtgaaggtagagaaaagaggg
agggaggcctcgcaccctcacacagagtcgagccacgacacaggccgtttaggtagtgca
atgcaggggctggaggaaatggacgaggtgtttaaccgcggtatcaaaacgcagcaccat
cacctccagccgcccctggacagagagggggcgaaggagagaggggatgagcacacagac
caagagactgatgtaagtaaatacaagagggcgagtgggaaaaatagacatagggcaggt
gggacgttcagaatggaccagcatgcccctgggcctccctccccagagtcctcctttaca
cgggactctttgctccctgccaagcgctgcaagtcggactcccccgacatggacaacgcc
agtttctccagcggcagccccccggacgactctctgaatgagcacctgcagtgtgccatc
gacagcatcctcaacctgcagcaggagcccactgcccgcattaaaggggggggcagcagg
tcacatcaaagccagcgcccggggggctcggcagcctcgtcccacagaccctcagtacca
ccctcctcctccgcctcctcgtcctcctccttggcccagcaccctcaggttggtggccgc
ggtcacaatggcagcctggtgccgcagactcacagcagataa
DBGET
integrated database retrieval system
