Notothenia coriiceps (black rockcod): 104960560
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Entry
104960560 CDS
T04920
Symbol
stxbp5
Name
(RefSeq) syntaxin-binding protein 5
KO
K08518
syntaxin-binding protein 5
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncc04131
]
104960560 (stxbp5)
Membrane trafficking [BR:
ncc04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
104960560 (stxbp5)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
104960560 (stxbp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LLGL
WD40
ANAPC4_WD40
Lgl_C
Synaptobrevin
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
104960560
NCBI-ProteinID:
XP_010786939
UniProt:
A0A6I9P8I4
LinkDB
All DBs
Position
Unknown
AA seq
997 aa
AA seq
DB search
ITFCHLPFQSKWLYIGTERGNIHLVNVESFMLSGYVIMWNKAIELSTKAHPGPVVHISDN
PMDEGKLIIGFESGIVVMWDLKSKKADSRYTYDEAIHSVAWHHEGKQFICSHSDGTLTIW
NIRGQGKPIQTITPHGKQPKDGKKPEPCKPILKVEYKTTRIGEPFMILSGGLSYDTVGRR
PCLTVMHGKSTAVLEMDYPIVDFLTLCETPYANDFQEPYAVVVLLEKDLVVIDLAQNGYP
IFENPYPLTIHESPVTCCEYFADCPVDLIPALYSVGSRQKRQGYSKKEWPISGGNWGQGT
QSYPEIIITGHADGTVKFWDASAMMLQVLYKLKTAKVFDRNRSKEDKGSTETSDEDPFAI
QIMAWCPESRMLCVAGVSANIIIYRFSKLEVTTEVVQLLEVRMQYELNDIESPDGGEPAL
PTPGASPQTSGPPSHPSTSSNNSDGGNMPCLKVRSTPLKQSAGYQVDLVVQLVWVSGEPP
QQITSLALNSSYGLVVFGNSNGLAVVDYVQKTVVLNLGTVELYGSNDPYQRQPRSPRKTR
QPSGGLCDINEGSATSEDRCKSPTSVLMSNSNLQQFYNGGGRGAKMSRKLSLPTELKPDL
VFLSVCPPRGANPLDHRDNSFSRSRSSSVTSIDKEAREAISSFHFSDTFARKGDSTLTPC
LYVGTTLGTVLALALTLPPAGEQRQLQPVILSPTGMLVRLKGSIMRMALLDSTGSMLPPA
FEPWFEPNVTADGEEREKVRKRRPVSVSPSTSQDLNESQYAVVCSEKQAKVISLPSQTCI
YKHSITEASFILRADVVQMSQGVSLACFCANGHIMTLSVPGLRPLMDVNYLPLTDMRIAR
TFCFTNLGQAMYLCSPTEVQRITYSQDTCENLQEMLGELFTPVETPEAPNRGFFKGLFGG
GAQSLDREELFGEISSGKANRSLAQHIPGPGGLEGMKGAASGVVGDLARARIALDERGQK
LGELDERTAAMMTSADSFSKHAHEMMLKCKDKKWYQL
NT seq
2995 nt
NT seq
+upstream
nt +downstream
nt
aataactttctgccacctgcccttccagagtaaatggttgtacatcggcacagaacgggg
gaacatccacctcgtcaacgtggagtcctttatgctctcaggctacgtcatcatgtggaa
caaagccattgaactgtcaaccaaggctcaccctggaccagttgtgcacataagcgacaa
ccccatggatgagggaaagcttataattggatttgagtctgggatcgtggtcatgtggga
tctgaaatcaaagaaggccgactctcgctacacttacgatgaggctatccactcagttgc
ctggcatcacgagggcaagcagttcatttgcagtcactcagatggaactctgaccatatg
gaacatcagaggccagggcaagcccatacagacaatcaccccgcacggaaaacagcccaa
ggacgggaagaagccagagccttgtaaacccattctcaaagtagagtacaaaaccactag
aattggtgagcccttcatgatcctgtctggtggcctctcctatgacacggtgggccggcg
gccatgtttgacagtaatgcatgggaagagcaccgccgtgctggagatggactatcctat
cgtagacttcctcacactgtgtgagacaccatacgccaatgattttcaggaaccttacgc
tgtggtggtccttctagaaaaggatttagtggtgatcgaccttgcacaaaatggttaccc
catattcgagaacccgtatcctctgactatccatgagtctcctgtgacctgctgcgagta
ctttgccgactgccctgtggacctcatacctgcactttactccgtcggctcgcggcagaa
acgacagggctacagcaaaaaggaatggcctattagtggtggaaactggggtcaaggcac
acagagctacccagagatcatcatcactgggcatgctgatgggactgtgaagttctggga
tgcctctgcaatgatgctccaggtgctctataaactcaaaacagccaaggtttttgacag
aaacaggtccaaggaggacaagggcagcaccgagacgtcagatgaagaccccttcgccat
tcagatcatggcctggtgccctgagagcaggatgttgtgtgtggccggggtgtcagcgaa
cattatcatctaccgcttcagcaaactggaagtaactaccgaggtggtgcagttactaga
ggtgcgaatgcagtacgagctgaacgacatagagtctcctgacgggggagaaccggcgct
tcccacccccggtgcctcccctcagacaagcggcccaccgtcacacccctccaccagcag
caacaactctgacggaggcaacatgccctgcctcaaagtgcgcagtactcctttaaagca
gtctgcaggctaccaggtagatttggtggtccagttagtgtgggtgagtggagagccccc
gcagcagatcacaagtctggcgctcaattcctcctacggtcttgtggtgtttggcaacag
taacggtctggcagtggtggactacgtccagaagacggtagtgctcaacttggggacggt
ggagctttatggctccaacgacccttaccagagacagccccgctcgccaagaaagacacg
acagccctctggaggtctgtgtgacatcaacgagggctcggccacatcagaggaccgctg
caagtcccctacttcagtgttgatgtcaaacagcaatcttcagcaattctacaatggagg
tggtagaggagcaaagatgtcacggaaattaagcttgcctactgagctaaagccagactt
ggtcttcctgtctgtatgcccgccacggggtgccaacccattagaccatcgggacaattc
tttcagccgttcgcgctcctccagcgtcaccagcatcgacaaggaagcccgagaggccat
cagctccttccacttcagtgacaccttcgcccggaagggggacagcacgttgacgccctg
cctgtatgtgggcactactctgggcaccgtgctggctctagctctcacattgccacctgc
tggggagcaacggcaactgcagccagttatcctttcacctacaggcatgttggttcggct
gaagggcagcatcatgcggatggctctcctggactcaacaggttcaatgctgccgcctgc
gtttgagccttggtttgaacccaacgtaacagcagatggggaagaaagagagaaggtccg
caagcgccggcctgtctcagtgtccccctccacctcccaggacctcaacgagagccagta
tgctgtggtgtgttcagagaaacaggccaaagtcatttccctcccctcccagacctgcat
ctacaaacacagtatcactgaggcctccttcatcctgcgggcagatgttgtgcagatgag
ccaaggcgtgtctctggcctgtttctgtgccaatggccacatcatgacactcagtgtgcc
ggggctgagaccactcatggatgtaaactacctgcctttgactgacatgcggatagcaag
gacgttctgcttcactaacctgggtcaggccatgtacctctgttcccccactgaggtcca
gaggatcacctacagccaggacacctgcgaaaacctacaggagatgctgggggaactttt
tacaccggtggagacaccagaggcccccaacagagggttcttcaaaggcctcttcggggg
aggagctcagtccctggacagagaggagctatttggtgagatttcttctggaaaggcaaa
ccgaagtctggcccagcacatcccaggcccgggtggcttggaggggatgaagggggcagc
atcaggtgtggttggagacttggctcgtgcccggatagcgctggatgaaagaggccagaa
actaggcgagctggatgagaggacagctgccatgatgaccagcgctgattccttttccaa
acatgcccatgagatgatgctgaagtgcaaagacaaaaaatggtaccagttgtaa
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