Notothenia coriiceps (black rockcod): 104961679
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Entry
104961679 CDS
T04920
Symbol
sec16a
Name
(RefSeq) protein transport protein Sec16A isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncc04131
]
104961679 (sec16a)
Membrane trafficking [BR:
ncc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
104961679 (sec16a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec16_C
Sec16
Motif
Other DBs
NCBI-GeneID:
104961679
NCBI-ProteinID:
XP_010788312
UniProt:
A0A6I9PJD8
LinkDB
All DBs
Position
Unknown
AA seq
1699 aa
AA seq
DB search
MQPPPWTGPPGASGGPPPPSGPNMFRRTRPLKHSAAAPTAPMAPTTQPMTNPFAFVRAPP
PLAGGGLPTIPNSNPPPMQAPPNSMYSQASSGLPPQLQTPEGGSAAPPGPLPSSLPGVTL
FNPHSAAAPSVYSAPGPAGYASSHNEQGYFNSTDQTPSMALEPPHAAAAPAPSQTPLNQE
YQGRPPSQPVPFQPVPPTSSYSQWSPDHGSRPPSVQNYFQPTSDLPPQPFNLPPQTQMYP
SLSPSPHHNAPTPPTQPAHPQSQAQFPPQNPVNAPSSQWPDPNAPQQHNSHFQTQSYFSQ
SSAPQDSWFNMPPQDSGYHQMGTGLAHPQPRPESHASQHVSNTGASSAPVPYSQESGSLS
MFFKDSDVENEETLAGDRNKAENGIPGSLQHHSHPSQSDAPLQDHSHLPYMNEGCHPPQP
STQEPPDPQNDHMENLECVPNQEVLPSEMHGSPPVATAAAQGVDQYETGPNLETPDSIPR
PIRSTSVSSNYSNMSHGSGSGTRRHQGVVGTFIQQESPRLTEDANLPAATGGYFEQIDTS
PAGAMGAPPSPQEQIWAPTPSPPKPTGIFQASANSSFEPVRSHGVGVRPAEVDRANVVAE
GRAEAPPGNLEQPPDNMENIYGQGHPLPAGPGGGVPHLPHLVLLPHSRPSSRSFGASRPC
ESPATTLWAPHDPASLGANILLAPAAPTVLAPLREPSVDVIQPPEDVPLDLQPPQRTQAH
QHSENLENPPQVSEAEPADLHGNLGYASLLVADSIQQPVLIAPPVSNYSVIPPSTAAQAP
SLKETTPPVRPLPQGQGASTSQPPPVTSDQNQLFTPGPLSFNPSASNHGPLNLTRDYADS
AMLDLPQSQPARSPLSRGQSFVGEGLSALQVNPQASLAAAPVSNHNQPSNYELLDFSMHQ
SQAHIPSSQHESPQSSNGFYLQVTKDAQQGGRAMGNVPVQTPASSSSTPQVPPAPPQAAA
NIQPPPAEAPQTSQAAPPGPHYAAPVPVSAAPPSRDQYPPPAPAAGDAYPPGPQGPAPPG
APQPAPGEPPRPPSSAGSQQGYGPPPPPGPGQMYGGYYGNYGEYPDGRAAYPPGQYPPQP
PGQYPPQPPGQYPPQPPGPYPPPPPPGDPRAQQYYPDGSYRGRADPWYGRYEGQAAAYRD
PNLQYREPQPERPSSRASQYSDRSSSRQGYPEDPKRANQSTYNEYYADYAKHYDYGAYNY
GAYDPRYRAYYDQAWANYDESCRGRENYYNQQQQAYPARKEGFDDQWRYYPGYDASFDDD
YRRRGEVFGDDFDRRSVHSEQSAHSVHSAHSNTSRRSSFSSQSQQSQVYRSQPDLVSAVY
DTTSSTLAVDYSYAQYQNQADATQNYNQYLYPSEYSADSTWTAPEQPPPRPATPEKFSMP
HRCARFGPGGHLIQVLPNLPSAGQPALVDIHNLETMLQDTPEQAELRAFPGPLVKEETHK
VDVIKFSQNKALECARDNNLLDRDSARLLWDFIMLLCRQNGTVVGTDIADLLLKEHRSVW
LPGKSPNEANLIDFNNEPLARAEEEPGAGPLSLLSDTFMIVPENLGKETERFRELLLFGR
KKDALEAAMKGGLWGHALLLASKMDNRTHARVMTRFANSLPINDPLQTVYQLMSGRMPAS
ATCCGEEKWGDWRPHLAMVLSNLTHTLDLDTRTISTMGDTLASKGLIDASHFCYLMAQVG
LGVYTKKSTKMVLIGSSHR
NT seq
5100 nt
NT seq
+upstream
nt +downstream
nt
atgcagccccctccttggactggacctccaggagcctctggcggccctcctcctccttct
gggcccaatatgttccgcaggaccaggcctctcaagcactcggcagcagcacctactgcc
ccaatggcacccactactcaacccatgacaaacccttttgcttttgttagagctcctccc
cctttggctggtggtggtctcccaacaattcccaacagcaaccctccaccaatgcaagcc
cctccaaactccatgtactcgcaagccagctcagggcttcctcctcaactgcagactccg
gagggtgggtcagccgcgccccctggtcccctaccgtcctctctaccaggggtgactctg
ttcaaccctcacagtgcagcggcccccagtgtttactcagcacccggcccggcaggatat
gcatcctcacacaatgaacagggctattttaattctacggatcagacaccatctatggcc
ctggagcccccacatgcagctgcagccccagcaccgagtcagacacctttaaaccaggag
tatcaagggcggcccccttctcagcccgttcccttccagccggtgcctcccacctcctcg
tattcccagtggtcccctgatcacggtagtcgccctccgtcagtgcagaactatttccag
cctactagcgacctaccgccacagccttttaatttacctccgcagacccagatgtacccc
tccctgagcccatcacctcatcacaacgcccccacccctccaacacaacctgcgcatccc
cagtctcaagctcagtttcctccccagaaccccgtaaacgcccccagctctcaatggccc
gacccaaatgcaccgcagcagcataactctcacttccaaactcagagctacttcagtcag
agctcggccccccaggactcgtggttcaacatgcctccgcaagactcaggctaccaccaa
atggggaccggcctggcccaccctcagccccggcccgagtctcatgcttcccaacatgtg
tccaacactggggctagttctgctccagtcccatactcgcaggagtctggttccctctca
atgttcttcaaagacagcgatgtggaaaatgaagaaacactggctggagatagaaataaa
gctgagaacggtattcctggatccctgcagcatcacagccaccccagccaatcagatgct
cctctgcaggatcactcacacctaccatacatgaatgaaggctgccacccaccacagccc
agcacccaggagccccctgatccgcagaacgaccacatggagaatttggagtgtgtcccg
aaccaggaagtattacccagtgaaatgcatggcagcccgcctgttgctactgctgcagcc
cagggagtagaccagtatgaaacagggccaaacctggagactccagattcgattccacgt
ccaattagatctaccagtgtgtcctccaactacagcaatatgagccatggcagtggaagc
ggcacccggcggcaccagggagtcgtgggaacctttattcagcaggagagtccacgtctc
actgaggatgctaacctgcctgctgccactgggggttactttgagcagattgatacttcc
ccagctggagctatgggtgcacctccgagcccccaggagcagatatgggcccccacaccc
agcccgcccaaaccaaccggcatcttccaggccagcgctaacagctcctttgaacctgtg
cgctctcatggagtaggggtgcgccctgctgaagttgacagggctaacgtggtagcggaa
ggccgtgcagaagctccgcctggaaacctggagcagccgccagataatatggaaaatatt
tatggccaaggacatcctttgcctgctgggcctggaggtggtgttcctcatctgcctcac
ctagtgctccttcctcactctcgaccttcatcccggtcttttggcgccagtcggccctgt
gagagcccggccaccactctgtgggccccgcatgatcctgctagcttgggcgctaacatc
ctcctagcccccgctgccccgacagttctcgcccctttacgagagcccagtgtggacgtg
atccaacctccagaggacgtccctctggacctgcagcccccacagagaacccaagcacac
cagcactcagaaaaccttgagaatcccccacaggtgagtgaggcagagccggctgacctc
catggcaacctgggctatgcttctctccttgttgccgactcgatccagcagccggttttg
attgccccgcctgtgtctaattacagcgtgattccccccagtactgctgctcaagcacca
agccttaaggagaccaccccccctgtgaggccactcccacagggacagggtgccagtacc
tcccaaccacctcctgtaacctctgatcagaatcaattgttcacgcctggacctttaagc
ttcaatccttcagcttctaatcacggcccgctcaatctgacccgagactatgcagactcg
gcgatgttagacctgcctcagtctcagcctgcccgctctcctctctcaaggggccaatca
tttgttggagagggcctttctgctctccaagttaatccacaagcttctctcgcagccgct
cctgtctctaatcataatcagccttcaaattacgaactgcttgatttttctatgcaccaa
tcacaagctcacatcccatcctctcagcatgagtctccacagtccagtaatggattttac
ctacaggtcaccaaagacgctcagcaggggggaagagcgatggggaatgtccctgtccag
acccctgcctcttcttcttctaccccacaggtaccaccggccccccctcaagcagctgca
aacatccagcctcctccagctgaagctcctcaaacgtctcaggctgcaccgccgggacca
cattatgctgctccggttcctgtgagtgcagcacccccctcccgtgaccagtacccacca
ccagcacctgctgcaggggatgcataccctccagggcctcaaggacctgcacctccagga
gctccccagcctgctcctggtgagccccctcgaccaccttcctctgcaggcagccagcag
ggctatgggccccctcctcctccaggaccagggcagatgtatggtggctattatggtaat
tatggagaatacccggacggcagagcagcttatcctcctggccagtacccgcctcagcct
cctggccagtacccgcctcagcctcctggccagtacccgcctcagcctcctggcccgtac
ccgcctcctccaccacccggggatcctagagcacagcaatattatccagatggctcgtac
aggggcagagctgatccgtggtacggcagatatgaaggacaggcggcagcttatcgggat
ccaaaccttcagtacagagagcctcagccggagagacccagctccagagccagccagtac
tctgaccgctcctcctccaggcaaggctatcctgaagatcccaaaagagcaaaccaaagt
acctacaatgaatattatgcagattacgccaagcactatgattatggagcatacaactat
ggagcgtatgacccgcgatacagagcgtactatgatcaggcctgggctaattatgatgaa
agctgcagaggcagagaaaactactataatcagcagcaacaagcgtatcctgccaggaaa
gagggcttcgatgatcagtggcggtactaccccggttatgatgccagttttgatgatgat
taccgtcgccgtggagaagtgttcggggatgacttcgaccgccgcagtgtccacagtgag
cagtcggcccacagcgtgcacagcgcccacagcaacaccagccggaggagcagcttcagc
tcacaatcacagcagagccaggtgtacagaagccagcctgacctggtgtcagccgtctat
gacaccacctcttccactctggctgtggactactcctacgcacagtaccagaaccaggcc
gatgctacacagaactacaaccagtacctgtacccctccgagtacagcgcagacagcacc
tggaccgcccccgagcaacctccacctcgtcctgcaaccccagagaagttcagcatgccc
caccgctgtgcccgctttggccccggtggtcatctgatccaagttctgcccaacctgccc
tcagctggccagcctgctctcgttgatatccacaacctggagacaatgctgcaggatacc
cccgaacaggcagaactgcgggctttccctggccctcttgtgaaggaagagacccataag
gtggatgtgatcaagttctctcagaacaaagctctggagtgcgctcgggacaacaacctc
ctcgaccgggactctgcccgcctgctgtgggacttcatcatgctgctctgcaggcagaac
gggacggtggtcggcacggacatcgctgacctcctgctgaaggagcaccgctccgtctgg
ctcccggggaaaagtcctaatgaagccaacctgatagattttaacaacgagccgctggct
cgagctgaggaagagccgggcgccgggccgctgtctctcctctccgacactttcatgatc
gtcccagaaaacctgggcaaggaaactgaacgcttcagagagctgctgctgtttggccgc
aagaaggatgcactagaagcagctatgaaggggggcctctggggccacgccctgctgttg
gccagcaagatggacaacaggacacatgcacgcgtcatgacaaggtttgccaacagtctg
cccatcaacgaccccctgcagacagtgtaccagctgatgtcagggaggatgccggcctca
gccacttgctgcggagaggagaagtggggtgactggcgcccccacctggccatggtgctg
tctaacctcacacacactctggacctggatacccgcaccatcagcaccatgggagacact
ctggcttccaaggggctgatcgatgcttctcatttctgctacctgatggcccaggtgggt
ctgggagtttacacaaagaagagcaccaagatggttctgattggctccagccataggtaa
DBGET
integrated database retrieval system
