Notothenia coriiceps (black rockcod): 104962702 Help Entry 104962702         CDS       T04920                                  Name (RefSeq) synaptopodin-2-like isoform X1   KO K24066   synaptopodin-2 Organism ncc  Notothenia coriiceps (black rockcod) Pathway ncc04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:ncc00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     104962702  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04990 Domain-containing proteins not elsewhere classified [BR:ncc04990]     104962702 Domain-containing proteins not elsewhere classified [BR:ncc04990]  PDZ domain-containing proteins   Other PDZ domain-containing proteins    104962702 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  PDZ PDZ_6 Motif Other DBs NCBI-GeneID:  104962702 NCBI-ProteinID:  XP_010789467 UniProt:  A0A6I9PMR9 LinkDB All DBs Position Unknown AA seq 1588 aa AA seqDB search MGTGDYICVTLRGGAPWGFTLREGEGDTYRPFLISQVEAEGRASLAGVCEGDEVVSLNGE PCADLTLLRACAFIDTSIDCLQLLLKRYCIVPSEEYESKETHAAERDSSGEAVESTTLHI FPPQHRSQSPREIYISEAQDETCYGDTEFPKSPQLLCTQLHAPSSDDQKGPILKENEERQ CFSPGNMVELQVSLFESTLEDVGCTSLGSAMGIEGEPSNRQVVQEIHTTSITSHYVPRPA REPLGQYGVVLSSPSMLGQVEVIVQQPGASGTRRSISRVGGPRVSGSQSEREEGGGPCEG VPGCFTVSFPSEEATAAEEQDSETEGDPDKPNKHRAKHARLRRSESLSEKQVKEAKSKCK RIALLLSAAPPNPNNKGVLMFKKHRQRAKKYTLVSYGTGEDEPEYSDEEDEDTQETHTVE FTLVAPNGSEIDKHFVTNAKSGKSVLTINWDKGLLEIERNLKNGAEMECLPDTQGKGATM FAQRRLRMDEISAEHDELRRQGIAVEAVPLIEKKMEEHTYMQSTTEGHAYMDVNIHQQSQ QQQEYQQYQEQQYYEQQQNYQQQQLQLQQQQQQQQQQLQLKQQQLYQQQQQQQQQQQQQQ QYEQQQQYEQQHNQQQQMYQQQREYQQQQQMQHYSTNINGTVQHQHSEIQSSFSNPSAKP FAAENMAAAPYSPAMSGTNQDSVSQGEQIASRDERIATPASRTGVLSDARRRNAGKPMFS FKEAPKVSPNPALLNLLNRKDRKLGFESGGEEDYLSLGAEACNFLQSQQIKNKVPPPVAP KPVIDPNSPPWTPQIEMINQDMPQQAENSVFTPALAPTIETTPAPELEPTPAPAPEPSPP PAPQEAPASNPTVEQPTWALQEPETQQPLQVTAQEENGHTNCPPQHELAPCWAPAQTEAQ QQPPTNSWPPAQVQPEVPPQSQSPPQLPWVTRLPAQTQVQPQPPTNNWNPQIQPAWTQPQ EQPPSHPQAQPPWTHSHEQPNMPQPQPPWGQPHEPMQQQQPQAPWAQPSHTDSQSQPPWM QQPQQKPQAQPPWAQPIQTESQPQQPWVQQPQHQAPQPAWPQAQAPCQPQPPWVSAPPQQ QPQINAWPPSQTQAQVQPPWIQAAPSQLPAQPQAIVNPWMPVPAQAQSQPSWAQNPTEPA QPPINSWAQEQNQTQPQPQNQPPWAQPGPPQPASQPDWQQSSSLPQPPINTWPQPQTPVN AWAPQPQQTPVSASTTMVNTQPSPKPWQPPHNLPQARSPPTPPQRMHSFNISQHSSSPIN PMATVLNPATQGSSCDMPAVRGKGADMFAKRQSRMEKYVVDSETVEANKATRAPSPVASL PNEWKYTSSVRAPPSRSYNPILSPWNPPSKQPPSTSPTIKAKKKDQGKPKPAPKPLNVID VMKHQPYQLDSSLFTFGPAVEAAKAAQAKLECSPPNPPVENQPIRYDQMAPVQQTGPYNT LYPQQGYGMPMQPMMHDGHYQQHPANIYPPSNPYQQPPAGPYQQPYNQQYQQPGPPAYHP QAPQSPNQPYQHPPQPPQAPYQPANSPPYMAAPSVPYQQQPPSSFVVSSFTVAARPESAL GGPAAAPKPKFMAKKSSAQVWKPSADKE NT seq 4767 nt NT seq  +upstreamnt  +downstreamnt atgggcaccggggactacatctgcgtgactctgcgggggggtgcaccctggggcttcacc ctgagggagggagagggggacacctacagacccttcctaatctcccaggtggaagccgaa ggtcgtgcctccctggctggagtgtgtgaaggtgacgaggtggtgtcactgaacggagag ccgtgtgctgatctcactctgttacgagcctgtgcattcatcgacacatccatcgactgt ctgcagctgctgctcaaaagatactgcatcgtcccatcagaagaatatgaatcaaaagag acacacgctgcagagagggactcctctggtgaggctgtagagagcaccaccctccacatc ttccccccacaacacaggtcccaaagcccgagggagatctacatatccgaggcccaggac gagacctgctatggggacacagagtttcccaagagtccccaactgctttgtacccagctc catgctccctcgtctgatgatcagaaaggtcctattctcaaggaaaatgaagaacggcaa tgcttctcccctgggaacatggtggagctccaggtgtccctgttcgagtcaactttggag gacgtgggctgcacctctctggggagtgctatggggatagagggggaaccctccaacaga caggttgtccaggagatccacaccaccagcataacgtcgcactatgtcccacggcctgcc agggagccgctcggacagtacggggtggtgctcagctccccgtccatgctggggcaggtg gaggtcattgtgcagcagccaggcgcatcaggaacaaggaggagcatctccagggtggga ggccctagggtcagtgggtcccaaagtgaaagagaggaaggaggagggccctgtgaggga gttcctgggtgtttcactgtctcatttccctcagaagaggcgacagcagcagaagagcag gactcagagactgagggggatccagacaaacccaacaagcatcgggcaaaacatgccagg ctcaggcgcagcgagagtctttctgaaaagcaggtgaaggaagccaagtccaaatgtaaa cgtattgctctccttttgtcggctgctccgcctaaccccaacaacaagggggtgttgatg ttcaagaaacatcggcagagggccaagaaatacacactggtgagctacggcacaggagaa gacgaacccgagtacagcgacgaagaggacgaggatacacaggaaacccacactgttgaa tttacccttgtggctccaaacggttctgaaatagacaagcacttcgtcactaatgccaaa agtggcaaaagtgtgctaactatcaactgggacaagggtcttctggagattgaaaggaac ctgaaaaacggagcagagatggaatgtttgcctgacacacagggcaagggggctacaatg tttgctcaacggcgtttaaggatggacgagatttctgctgaacatgatgagctcaggcgc caggggatagccgtggaagcagtaccgttgattgaaaagaagatggaggagcacacttac atgcagtccacaacagagggccatgcttatatggatgtaaatatacaccaacaaagccaa caacaacaagagtaccagcaatatcaggagcagcagtactatgagcaacaacagaactac caacaacaacaactacagctacaacaacaacaacaacaacaacaacaacaactacagcta aaacaacaacaactataccagcagcagcagcagcagcagcagcagcagcagcagcagcag cagtatgaacagcagcagcagtatgaacaacagcacaatcaacagcagcaaatgtatcag cagcagcgagaatatcaacagcaacagcaaatgcagcactattctacaaacatcaatggc acagtgcaacatcaacacagtgaaatccagagttctttcagtaatccatctgcaaagcct ttcgctgcagaaaacatggcggctgctccttattctcccgcaatgagtgggaccaatcaa gattctgtgagccaaggagagcagatagcctcccgggatgagcgcattgctacccctgcg agtcggactggggtgttgtccgacgcaaggagaagaaatgctggtaagcctatgttctcg tttaaggaagcacctaaagtatcgcctaacccagcactgctaaacctcctcaacagaaag gataggaagttgggttttgagtcaggaggcgaggaagactaccttagccttggggctgag gcttgtaatttcctgcaatctcaacaaattaaaaataaggttcctccacctgtagctcca aagcctgtgatcgaccccaactctcctccttggacaccgcagatagaaatgatcaaccag gacatgcctcaacaagctgaaaatagtgttttcacacctgctctagcccccaccatagag acaacccctgctccagaactagagccaacccctgcacctgcccctgagccctccccccct cctgcccctcaggaggctcctgccagcaatcccactgtggaacagcccacatgggctcta caagaacctgaaactcaacagcctctgcaagtgacggctcaggaggaaaatggtcatacg aattgtcccccgcagcatgagcttgctccttgctgggctccagcacaaacagaggcacaa caacagccacctaccaattcttggcctccagctcaagtgcagcccgaggtaccacctcaa agtcagtcgccaccccagctaccttgggtgacacgtctacctgcacagacccaagtacag cctcaacctcctacaaataattggaaccctcaaattcagccagcatggacccaacctcaa gagcaaccaccgtctcatcctcaggcccagcccccctggacacactctcacgagcagcca aatatgccgcagccacaaccaccttggggtcaaccccatgaaccaatgcagcagcagcaa ccccaggctccatgggcacaaccatcacatacagactctcagtctcaaccaccatggatg caacaaccgcagcagaaaccccaagcacaacctccttgggctcaaccgattcaaactgaa tctcagccacagcagccatgggttcagcaaccacagcatcaggcaccacaaccagcatgg ccacaggcgcaagcaccatgtcagcctcaaccaccttgggtctcagctccacctcaacag cagcctcaaattaatgcatggcctccgtcacaaactcaagcccaagttcagccaccttgg atccaagcagccccatcacaacttcctgcgcagcctcaagccatcgtgaatccatggatg ccagtaccagcccaggctcagtcccaaccatcatgggcccagaaccctacagaacccgct cagccacccattaattcttgggcccaagagcaaaatcagacccaacctcaaccccaaaat caaccaccttgggctcaaccaggtccaccacagccagcgtcacagccagactggcaacag tcctcttctctaccacagccaccgattaatacatggcctcaacctcagacacctgtgaat gcctgggcaccacagccacagcaaacacctgtgagtgcttccacaacaatggtaaacact cagccttcaccaaaaccttggcaaccaccacacaatctcccacaagcaaggagccctcca actccaccacagcgaatgcactctttcaacatcagtcaacattcttcatctcccatcaac ccaatggcgactgtcttaaacccagcaacccagggttcatcttgtgatatgccagccgtc agagggaaaggagctgatatgttcgctaagaggcagtctcgtatggagaaatatgttgtg gactctgagactgtggaagcaaacaaggcaacccgggcaccatcaccagttgcatcctta ccaaatgaatggaaatacacatctagcgtacgtgctcctccttcacgatcatacaaccct attctgtccccttggaatcccccatcaaagcagcccccttccactagtcctacaatcaaa gccaagaaaaaagaccaagggaaaccaaagcctgcccctaaacccctcaatgtaatagat gttatgaagcatcaaccctatcaactcgattcctcactctttactttcggcccagcagta gaggctgccaaggcagctcaagctaagctagagtgttcacctcctaacccacctgtcgaa aaccaaccaattagatatgatcagatggcccccgtccagcaaactggaccatataatacc ctttacccccagcaaggctatgggatgccaatgcagcccatgatgcatgatggccactac cagcaacacccagctaatatttatcccccctccaacccttatcaacaaccccctgctggt ccataccagcaaccttataaccaacagtatcagcaacctggcccccctgcttatcatccc caagctcctcagtctccaaaccaaccgtaccaacatcccccgcagcccccgcaggcccct taccaaccagctaacagcccgccttacatggcagcgccctcagtaccttaccaacagcag cctcccagtagctttgttgtttctagctttactgtagctgccaggcctgaatctgcatta ggtggccctgcagctgctcctaaacctaagttcatggcaaaaaagagctcagctcaggtg tggaagccttcagcagataaagagtga

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