Notothenia coriiceps (black rockcod): 104965735 Help Entry 104965735         CDS       T04920                                  Name (RefSeq) titin-like Organism ncc  Notothenia coriiceps (black rockcod) SSDB OrthologParalogGFIT Motif Pfam:  I-set Ig_3 ig Ig_2 V-set Ig_6 Izumo-Ig C2-set_2 Ig_4 Ig_5 V-set_CD47 THB DUF2262 Motif Other DBs NCBI-GeneID:  104965735 NCBI-ProteinID:  XP_010793050 UniProt:  A0A6I9PYG5 LinkDB All DBs Position Unknown AA seq 3380 aa AA seqDB search GAIKKPLRDLVVADSQTAVLECEVASPTAEGKWLKDGNNVDFNENTRSEAKGAVRRLVIA ITKATDVGEYTYQVATSKTTATLRVEAVKIKKTLKNLNVVQTQDASFSLELTHEDVRGAA WIKNGVEILPSDKYEISIEGAVHTLTIRNCSTSDESVYSFKLGKLSANARLNVEARVIEF TKKIKDIKVTEKKKAVFECEISEPNVQVVWMKNGQELEQEDRFSVTAEKFVHRLMIQSVR MSDAGEFSVVAGSSVSRAQLVVEGRDVRISDPPERDITVLEKQRATFELEVNEDEVEGRW LRNGVEIQFSVEQRFNYACIRRVHRLTVTETFRSDAGEYTFIAGKNRTTMNLHVRLPEPP QIERQMQPQTVSSGRSVRFTVQVSGLPMPTVSWYKDSQKVITDSKCKILHDENEHTLMLL DVFTEDAAVYSCAARNDFGEAMSSATLTVEVHETESRVSAPVLKAPMRDLLVAEGFPAQF QCTVSGEDLQVSWFCGDREVRDSDIFRMSRSGETYQLDISKTLSKHEGEYSCMASNAAGR VTCAATLNIDVTAEEQKPGAQVCDDLKVKPVFRHRIAPVEINTGNIAKFECETEDAPNVS FKWFKDGQPIKEGDKYRIISRFRTSSLELLSPNREDSGQYSCKATNQHGSDECSASLKVT ERKVPPNFTKRPSESMMDSVGKTVKMEARVSGSQPLSITWYKDNNQIYGSDKYAMSLENN VAVLSVRDSSSSDGGVYSCEASNEAGKASCRVTLNITETGQAPKFDVPLEPVTVNEGEKL SLKCHVTGSPPLNIQWMKDRRELKSSGNTRITFVGGSACLEVSPASKSEAGDYLCKASNT TGSNFCKSKVTVRDSGVKVSPPEAAAPAAAAPVKRLDNLFFIEELQTVSATEKGTATFIA KISGDPIPSVKWMKGKWRQITPGGRISIEQKGQDAKMEIREVTKSDSGQYRCVATNKHGE IESSADLEVSKKEEAEGLGDIRTRLKKTPSKQKSPKKEGDFNIVDLLRGHNPKDYEKILQ EHGIHDYRAILQAIEFLKREKEMESGKVEVEHGGQVEEEDMARLIQQLEGRVSTEPVSVL EDISDQTAPESQSATFQCRLRINYPEICLTWYKGTQKLEAGDRYDIGSEGERHFLNIKKC SGQDQGNYRVVCGPHISNAKLTVTGVRQAVEETGEWTETGDVSSVSEVFSSEDQRSSAAF RESEARKTKDEPRRGDADRSAEPEQKVLRKVSPEPYQPKPSAKPKTTPPEPRPRAEEPKE LKTETKEAKAEAKTPQEAPKARAAERPKPEAAVVQPPAAKVTPPSAEPGPAKVWEEPRPE EPVVQPPAPKVPAPKAEAAPTKVSPPEERKPAAPLSPAAAAPPAVSPPEEKKPSAPAAPA QKVAPPAASPPEEKKPSAPKPAAPAAKVTPPAAKVTPPAAKVTPPPAKVTPPAAKVTPPA VSPPEEKKVSAPKTPAEKVVPPAAQVSPVAKTPSPPGVQASPAASPPEDKGPVSAPGPTT DGKPSEEAPKGRGRGLGARQTPSPGDAGRGRGLKSGGRGPTPPEDPFGGFKLKAVPLKFV KKIKDILLLEAESIGSSAVFECEVSPSTAITTWMKDGTNLREGPKHKFTADGKDRKLNII DVQLSDTGEYTCVAKNAGKEITCTAKLVVEELPVKWVKDLEPETSCIKSQPMYLTCELNK EREVVWKRNGALLKKKAGKVAINIIGMQHAITIQNATEEDAGAYTCEVEGQEDVKTTTIV KIIEVIKDWLVKPLRDQHVKPKAKATFKCELFKDTPNWKWFKGDTELAPSDKIQIDKDGK NVTLTVNNCQADDVSDYIIAVEDRRYSAKLTLGEREAEVLKPLASQEVVEKEEANFDTEI SEEDVVGEWKLRGQVLMRSPTCDIKSEGKKRFMTLKQVQLDQAGEVSYQALNAVTTAMLT VKEIEMGFVEPLKDVSVPEKKQAKFECTVTKEVSKVLWFRGADIVTPSPKYEIMDDGRKH MLIINSCEFDDEAQYTVEVLGQRSSALLAVEGMRLKFVQQLKDQTVKEGKTVRFELELSH DNVPVVWYRNEVKLHVSRTVLTHVEGKRHILEMRTLCLDDTCQIKAEAKGIYSMAKLTVI EGDAVFVVKLQDYTATEKDEVSLDCELSKDVPVMWFHEETEVIASKTLLMKSEGTRRSLV LRKVEQSDQGKYVCDCGTDKTTASINIEARDVKVVRPIYGVELFDGETARFEVEISEDDV RGQWKLNGDVLTPSSDVDIIEEGGKHTLILYNCKVAMTGEVAYAAANAKCAANLKVKELP MNFLTPLSDVNVYEKDEARFELELSRAPKSFRWLKGTQELQKDEKYEMIQEGNMYVLQIR SVAYEDEAKYMFEAEDKRTSGKLVIQGIRLEFAKPIKDVTVKERETAEFSVELSHDKVPV VWYKNDVRLHPSKVVHMSDHGKVHTLAFKEVTIDDTSMIKVEAMDKSVTAMLTVIEGDLY FTTKLQNYTAVEKDEVKLVCELSKTIADVKWFKDGKEITPSKNIAFSTDGKKRILMVRKA EKANIGEYSCDCGSDKTAANLNIEERDIKVTRPLYSVEVTETETAKFETEISEEDVHGNW KLKGEALHQSADVEMKEEGTKHLLILYNVKMDMAGGVDFSAANAKSNAQLRVKARSIGLL RPLKDVTVTAGETATFESELSYEGIAVDWFVGGKKMEASERVKTRVAGKVHTLTLRDVTQ SEAGEVKMTSKDFQTAAQLIVRQPAVEFSRPLEDQSVEEEAAARLECEVSREEAEVRWFR EGQEVRKTKKYDVISEGRKRALVVLDCTPDDAKMYTCDAGDFKTSCFLEVMPPHVEFVKP LQDVEVKEKESARFECEVSRESAKVRWFKDGSEIRKGKKYEIVSKGVSRILIVHKSAFDD EAEYECDARTAKSCGMLTVIEEAARFTKNLSNVEGTETDSVKMICEVSKPSAEVRWFRGD EELPEGGRYEHIVDGKKRILIIQDLRMEDGGEYSCSLSATVTTSAKLSLSELAAEFIARP QNQEVVEGEKAEFSCSVSKDSYEVTWFRGEKEVQEGEKFSIVSEGKRRALIVKSCEVKDE GGYVAHIGGVKASAELTVIEKLRVITPIKDTEVKEGGEIVFNCETNTEGAKAKWLKNEET IFESSKYMMAQRDNVFSLRIREASKNDEAVYTISLTNQRAEQAKCSARAAVAEEKLRFLD PIEDVETQEKKTIGFTCKVNRPEVTVRWLKAGQEVTLSKRIVYRADGLKHTLTVKDCVMD DEGEYTAVVGDDKCVAELIISEAPTDFTAQLRDTTVTEFEDAEFTCKMSKEKAAVKWYRN GREIREGPRYHMEREGKTCRLVIKVCRPDDECEYACGLDERRTRARLFVEETPVEIIRPP QDTFQPPGSDVVFEVELNKD NT seq 10143 nt NT seq  +upstreamnt  +downstreamnt ggggagccatcaagaagcccctgagggacctggtggtggccgactcgcagacggcggtgc tggagtgcgaggtggcgagccccacggcggaggggaagtggctgaaggacgggaacaacg tggactttaatgagaacacgagaagcgaggcgaagggcgccgtcagacgcctcgtcatcg ctatcaccaaggcaaccgacgtgggcgagtacacctatcaggtggccacgtccaaaacca ccgccaccctgcgggtcgaggcggtgaagatcaagaagacgctgaagaacctgaacgtgg tgcagacgcaggacgcctcgttcagcctggagctgacccatgaggacgtgaggggcgcgg cctggatcaagaacggcgtggagatcctgcccagcgacaagtacgagatcagcatcgagg gcgcggtgcacacgctgacgatcaggaactgcagcaccagcgacgagtccgtgtactcct tcaaactcgggaagctgtcggccaacgcccggctcaacgtggaggctcgagtgattgagt tcaccaagaagatcaaagacataaaggtcacggagaagaagaaggccgtgttcgagtgtg agatctccgagcccaacgtgcaggtggtctggatgaagaacggccaggagctggagcagg aggacaggttctcggtgacagcggagaagtttgtccaccggctgatgatccagtcggtca ggatgtcggacgccggagagttctctgtggtggccgggtcgagcgtctccagagcccagc tggtggtggaggggagagacgtccgaatctctgacccccccgagagggacatcacggttc tggagaagcagcgcgccacctttgagctggaggtgaacgaggacgaggtggagggccgct ggctgaggaacggagtggagatccagttctctgtggagcagcgcttcaactacgcctgca tccggagggttcaccgcctcaccgtgacggagaccttcaggagcgacgccggagaataca ccttcatcgccgggaagaaccggaccaccatgaacctccatgtcaggctaccggagcctc ctcagatcgagcggcagatgcagcctcagaccgtttcctccgggcgctccgtacgcttca cggtgcaggtgagcggcctgccgatgcccacggtctcctggtacaaagactctcagaagg tgatcacagactcaaagtgcaagatcctccatgacgagaacgagcacacactgatgctgc tggacgtcttcaccgaggacgccgccgtctacagctgtgccgccaggaacgacttcggag aggccatgagctccgccaccctcaccgtcgaagttcacgagactgaatccagggtttctg ccccggtgctcaaagcccccatgagggacctcctggtcgcagaggggttcccggcccagt tccagtgcaccgtctctggggaagatctgcaggtttcctggttctgtggcgacagagagg tcagggactcagacatcttcaggatgtctcgttctggtgaaacctaccagttggacattt ctaaaaccctctccaagcacgagggagagtactcatgtatggcctcaaacgcagcaggaa gggtcacctgtgctgcgactctgaatatcgacgtcactgcagaggagcagaaacctggag ctcaggtctgcgacgatttgaaagtgaagcctgtgttcaggcacaggatcgcccctgtgg agatcaacactggcaacattgccaagtttgaatgtgaaactgaagacgctccgaatgtga gcttcaagtggttcaaagatggtcagcccatcaaagaaggagataaatacaggattatca gtcgcttcaggacctcctctctggagctgctgagccccaacagagaggacagtggtcaat actcctgtaaggcgaccaatcagcatggctctgacgaatgctccgcctccctcaaagtga cggagcgcaaagtccctcccaacttcaccaagaggccctcggagtccatgatggattctg tgggtaagacggtgaagatggaggctcgggtgtccggctcgcagccgctgagcatcacct ggtacaaggacaacaaccagatctacggctccgacaaatacgccatgagcttagagaaca acgtggccgtgctgtccgtcagagactccagcagctctgacggcggcgtgtactcctgcg aggcgtccaatgaggccggcaaggcttcctgtcgggtgaccctgaacatcacagaaactg gccaggctccgaagtttgatgttcctctggagccggtgacggtgaacgagggtgagaagc tgagcctgaagtgtcatgtgaccggctcccctcctctgaacatccagtggatgaaggaca ggagggagctgaagtccagcgggaacactcgcatcacgtttgttggcgggtcggcctgtc tggaggtcagcccggcctcaaagagcgaggctggggattacctctgcaaggcctccaaca ccaccggcagcaacttctgcaagtccaaggtcactgtgagagactcaggagtgaaggttt cccccccggaggccgccgccccggctgcagccgcccccgtcaagagactggacaacctgt tcttcatcgaggaactgcagacggtttctgccactgagaagggcaccgccaccttcatcg ctaagatcagcggagacccgatccccagcgtgaagtggatgaagggcaagtggaggcaga tcacccccggtggtcgcatctccatcgagcagaagggccaggacgccaagatggagatca gagaggtgaccaagtcggactcgggtcagtaccgctgcgtcgccaccaacaaacacggag agatcgagagcagcgccgacctggaggtcagcaagaaggaggaggcggagggactgggag acatccggacccggctgaagaagactccctcgaagcagaagagtcccaagaaggaaggag acttcaatatcgtggacctgctgagaggacacaaccccaaagactacgagaagatcctgc aggagcacggcatccacgactaccgcgccatcctgcaggccatcgagttcctgaagaggg agaaggagatggagagcgggaaagtggaagtggagcatggaggccaggtggaggaagagg acatggctcgcctcatccagcagctggagggacgcgtcagcaccgagccggtgtcggtcc tcgaggacatcagcgaccagacggctccggagagccagagcgccaccttccagtgccgcc tgcgcatcaactaccccgagatctgcctcacctggtacaaaggcacgcagaagctggagg ccggagacaggtacgacatcggcagcgagggtgaacgccacttcctgaacatcaagaagt gctcgggccaggaccagggcaactaccgggtggtgtgtggaccgcacatatccaacgcca agctcaccgtcacaggagtgagacaggcagtagaagagacaggcgagtggacagagacag gagacgtgtcttcagtgtctgaggttttcagttcggaggatcagagatcttcagctgcct tcagagaatctgaagcgaggaagacgaaggacgagccaaggcgaggagacgccgaccgat cagcagaacctgaacaaaaggttctcagaaaggtctctccggaaccttaccaaccaaaac cttcagccaagccaaagaccactccccccgagcccagaccgagggcggaggaacccaaag agctgaaaactgaaactaaagaagccaaggctgaagcaaagacacctcaagaagccccta aggccagagccgcagaacgtccaaagcctgaagcagctgtagttcagcctcctgcagcaa aggttacccccccatcagcagaacctggtcctgctaaagtgtgggaagaacccagaccag aggagcctgtagttcagccgcctgcaccaaaggttcctgcccccaaggctgaagctgctc caaccaaagtgtctcccccagaggagaggaagccagctgcacctttatctcctgcagccg ctgctcctcctgcagtgtctcccccagaggagaagaaaccatctgcacctgcagctcctg cacagaaggttgctcctcctgcagcgtctcccccagaggaaaagaaaccatctgcaccaa agcctgcagctcctgcagctaaagtcactcctcctgcagctaaagtcactcctcctgcag ctaaagtcactcctcctccagctaaagtcactcctcctgcagctaaagtcactcctcctg cagtgtctcctccagaggaaaagaaagtgtctgcaccaaagactccagcagaaaaagtgg ttcctccagcagctcaagtttcaccggtggccaagacaccctccccaccgggcgtacagg cctctccagcagcctctccgcctgaagacaagggaccagtttcagcacctggaccaacta cagatggaaaaccatcagaggaggcgccaaagggccgaggccgaggactcggggcgagac agaccccgtctcccggtgatgccggcagaggccgcggcctgaagtccggaggaagaggcc cgacccccccggaggatcccttcggagggttcaagctgaaggcggtgcctctgaagtttg tgaagaagatcaaggacatcttgcttctggaggccgagtccatcggatcctccgccgtgt tcgagtgcgaggtgtcgccctccaccgccatcaccacctggatgaaggacggcaccaacc tgcgcgagggccccaagcacaagttcaccgctgacggcaaagaccgcaagctgaacatca tcgacgtgcagctgtcggacaccggcgagtacacctgcgtcgccaagaacgccggcaagg aaatcacatgcaccgccaagctggtggtggaagagctgccggtgaagtgggtgaaggatc tggagccggagacctcctgcatcaagagccagcccatgtacctgacctgcgagctgaaca aggagcgcgaggtggtctggaagaggaacggggcgctgctgaagaagaaggccggcaagg tggccatcaacatcatcggcatgcagcacgccatcaccatccagaacgcgacggaggagg acgccggcgcctacacctgtgaggtggagggccaggaggacgtgaagaccactaccatcg tcaagatcatcgaggtgatcaaggactggctggtgaagcctctgagggatcagcatgtga agccgaaagctaaagctacgtttaagtgcgagctgttcaaggacacccccaactggaagt ggttcaagggagacactgagctggctccgtcggacaagatccagatcgacaaggacggca agaacgtgacgctgacggtcaacaactgccaggcagacgacgtctccgactacatcatcg ccgtggaggaccgcagatactccgccaagctcaccttgggagagcgcgaggccgaggtcc tgaagcccctcgccagccaggaggtggtggagaaggaggaagccaacttcgacacagaga tctccgaggaggatgtggtgggcgagtggaagctgaggggacaggtgctaatgaggtctc cgacctgcgacatcaagtctgaaggcaaaaagcggttcatgaccctgaagcaggttcagc tggaccaggcaggcgaagtgtcctaccaggcgctgaacgccgtcaccaccgccatgctca ccgtcaaagaaatcgagatgggctttgttgagccgctgaaggacgtttctgtgcctgaaa agaaacaggctaaatttgaatgcaccgtcaccaaggaggtgtcaaaggtgctgtggttca ggggggcggacatcgtcacccccagccctaaatatgagataatggatgatggcaggaagc acatgctgatcataaacagctgtgagtttgacgatgaggcccagtacacggtggaggttc tgggccagcggtccagcgccctgctggcggtggaaggcatgaggctgaagtttgtgcagc agctgaaagaccaaacagtgaaagaaggtaaaacggtccgctttgagctcgagctgtcgc acgataacgtgcctgtggtttggtaccgcaacgaggtgaagctccacgtgagcagaacgg tgctcacgcacgtggaagggaagagacacattctcgaaatgaggacgctgtgtcttgatg atacctgccagataaaggcagaggccaaaggcatttactccatggccaagctgacagtca tagagggtgacgcggtgttcgtggtgaagctgcaggattacactgcgacagagaaggacg aggtgtctctggactgcgagctgagcaaagacgtgccggtcatgtggttccacgaggaga cggaggtcatcgcctccaagacgttgctgatgaagagcgagggcacccgcaggtctctgg tgctgaggaaggtggagcagagcgaccaagggaaatacgtatgtgactgcgggacggaca agacgaccgccagcatcaacatcgaagctcgtgacgttaaggtggtgcgtccgatctatg gcgtggagctgttcgatggcgagacggcgcgcttcgaggtggaaatctctgaggacgacg tccgtggccagtggaagctgaacggtgacgtcctcaccccgtcctccgatgtggacatca tcgaggagggaggaaaacacactctcatcctctacaactgcaaggtggccatgacgggcg aggtggcgtacgccgccgccaacgccaagtgtgccgccaacctgaaggtcaaagagctgc cgatgaacttcctgacgccgctgagcgacgtgaacgtttacgagaaggacgaggcgaggt tcgagttggagctgtcaagagcgccgaagagcttccgctggctgaagggaacgcaggagc tgcagaaagacgaaaagtatgagatgatccaggaaggaaacatgtacgtcctgcagatcc gctccgtcgcctacgaggacgaagccaagtacatgttcgaggctgaggacaagaggacga gcggcaagctggtcatccagggtatccggctggagtttgctaagccgatcaaggatgtga cggtgaaggagcgtgagacggcagagttcagcgtggagctttctcacgacaaggtgccgg tggtctggtacaagaacgatgtccggctgcaccccagcaaggtggtgcacatgtcggacc acgggaaggtccacacgctggccttcaaggaggtcaccatcgacgacacctccatgatca aagtggaggccatggacaagagcgtgaccgccatgctcaccgtcatcgagggcgacctgt acttcaccacgaagctgcagaactacacagcggtggagaaggacgaggtgaagctggtgt gcgagctgagcaaaaccatcgctgacgtgaagtggttcaaagacgggaaggagatcacgc cctccaagaacatcgcgttcagtacagacgggaagaagcgcatcctgatggtgaggaagg cggagaaggccaacatcggagagtactcctgtgactgcggatcggacaagacagctgcta acctcaatattgaagagcgagacattaaggtgacccggccgctgtacagcgtcgaggtca cagagacggaaacagccaagtttgagacggaaatttcagaagaggacgtccacgggaact ggaaactgaagggagaggctctgcaccagagcgctgatgtggagatgaaggaggaaggaa cgaagcatctgctgatcctgtacaacgtgaagatggatatggccggaggagtcgacttct ccgccgccaacgccaagtccaacgcccagctgagggtcaaagcgcgctccatcgggctgc tgcggcccctgaaggacgtcacggtgacggcgggcgagacggccaccttcgagagcgagc tgtcgtacgagggcatcgccgtggactggttcgtgggcgggaagaagatggaggccagcg agagggtgaagacgcgtgtagcaggtaaagtccacacgctgacgctcagagacgtgacgc agtcggaggccggcgaggtgaagatgacctccaaagacttccagacggcagcacagctca tcgtcagacagccggcggtggagttctctcggccgctggaggaccaatcagtggaggagg aggcggcggcccggctggagtgtgaagtttctcgggaagaagccgaggtgcgctggttca gagagggacaggaagtcaggaagaccaagaagtatgatgtcatcagcgagggacggaaga gggcgctcgtcgtcctcgattgcacccccgacgacgccaagatgtacacctgcgacgccg gggacttcaagacctcctgcttcctggaggtcatgcctcctcacgtggagttcgtgaagc ccttgcaggacgttgaggtgaaggagaaggagtcggccaggttcgagtgtgaagtgtccc gcgagtctgcgaaggtgcgctggtttaaggacggcagtgagatcaggaaggggaagaagt acgagatcgtgtctaaaggagtgagtcggatcctcatcgttcacaaatcagcctttgacg acgaggcggagtacgagtgtgacgcccgcacggccaagagctgcggcatgctcaccgtca tcgaggaggcggcgcgcttcacgaagaacctgtccaacgtggaaggcacggagacggaca gcgtgaagatgatctgcgaggtgtccaaaccctcggccgaggtgcgctggttcagaggag acgaggagctgccggagggcggccgctacgagcacatcgtggacgggaagaagaggatcc tcatcatccaggacttgaggatggaggacggcggggagtacagctgcagtctgagcgcca ccgtcaccacctccgccaagctgtcactcagcgagttggcagcagagttcatcgcccgtc ctcagaaccaggaggtggtagaaggagagaaggcggagttcagctgctctgtttctaaag actcgtacgaggtgacatggttccgaggagagaaggaggtgcaggaaggagagaagttct ccattgtgagcgagggaaagagacgcgctctcattgttaagagctgcgaggtgaaggacg agggagggtacgtggcccacatcgggggcgtgaaggcgtccgcggagctgaccgtcatcg agaaactgagggtgatcacgcccatcaaggacacagaggtgaaggagggaggagagatcg tgttcaactgcgagacgaacacagagggagcgaaggccaagtggctgaagaacgaggaga ccatattcgagagcagcaagtacatgatggctcagagagacaacgtgttctcgctgagga tccgcgaggccagcaagaacgacgaggcagtgtacaccatcagcctgaccaatcagagag cagaacaggccaagtgcagcgcccgcgccgccgtggcagaggagaagctgcggttcctgg accccatcgaggacgttgagactcaggagaagaagacgatcggcttcacctgtaaggtga accggcccgaggtcacggtgcgctggctgaaggcgggacaggaagtgacactcagcaaac gcatcgtgtaccgcgccgacggcctgaagcacacgctcactgtcaaggactgcgtgatgg acgacgagggcgagtacaccgccgtggtcggagacgacaagtgcgtggccgagctgatca tcagcgaggcgcccaccgacttcaccgcacagctccgagacaccaccgtcaccgagtttg aggatgcagagttcacctgcaagatgagcaaggaaaaggccgccgtcaagtggtacagga acggacgagagatcagagaaggacccaggtaccacatggagcgtgaggggaagacgtgcc gactggtcatcaaggtgtgccggccggacgatgagtgtgagtacgcctgtggattagacg agaggaggacccgggcccggctctttgtggaggagaccccggtggagatcatcagacccc cccaggacacgttccagccccccggctccgacgtggtgttcgaggtggagctgaacaagg acc

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