Notothenia coriiceps (black rockcod): 104966509
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Entry
104966509 CDS
T04920
Name
(RefSeq) slit homolog 3 protein-like
KO
K06850
slit 3
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ncc00536
]
104966509
Glycosaminoglycan binding proteins [BR:
ncc00536
]
Heparan sulfate / Heparin
Axon guidance molecules
104966509
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
LRR_8
Laminin_G_2
Laminin_G_1
LRR_4
LRRNT
EGF_2
LRR_5
DL-JAG_EGF-like
LRR_9
JAG1-like_EGF2
EGF_3
LRRCT
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
104966509
NCBI-ProteinID:
XP_010794000
UniProt:
A0A6I9Q0E7
LinkDB
All DBs
Position
Unknown
AA seq
830 aa
AA seq
DB search
MTAGVEDNGCLPTSGCPDVCTCTEGVVRCSNRGLHSLPKGIPKDATELYLEGNMLTSVPK
ELAGLKQLSLVDLSNNSISTLASFTFNNMTQLATLILSYNQIRCIPVNAFDGLKSLRLLT
LHGNDLSTIPEGAFNHLTALSHLALGANPLFCNCDLRWLSQWVKAGFKEPGIARCTGPPD
MTDRLLLTTPLNRFQCKGPVDISLMSKCAPCLAAPCQNNGTCASDATGSYSCSCPYGFKG
HNCEIPINACVSFPCTNGGTCHIQTGFEDHFSCVCPPGFEGQRCEINPDDCEDNDCENNS
TCIDGVNNYTCVCPPNYTGDLCDEVVDSCLHGFDPCQHDSKCIHVGRTYRCECLPGYVGQ
HCEQDYNDCLENKCQHGAECVDAVNGYICVCKEGFSGLFCENPPPMILLQTSPCDQSDCQ
NGAQCLVVAGEPVCRCMPGFYGSKCDKMATVHFLGRDGYVELPSAKLRPTAHISLQVATD
KDNGILLYKEDHDPLALELYQGHIRLIYDIATYPPTTVYSVESVNDGLFHTVELLIQNRS
LSLVVDNGAPKSLGKLARQPSVDHNTQLYIGGVPSQVVASGLRPGPERSPQTFNGCIHNV
RINGEPQDLSYRGSGGARPQGVEPKSEGFLAGCHSCSVCAQGACREGGETGVTCDCPPGR
SGALCDQTTAPSACQNSRCIQGLCVPKGQSYSCQCSEGYQGQYCDRRQEPPACRGQRCGH
GECHVSEGGQPICHCQPGYTGPSCDTELTCQGEMVRELLKRYHPLKTCTSTTKIPRMDCP
RSCQAAAPSGVCCGVTKSRRRKAVFRCTDGTSYSEEMETALECGCSKCPL
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgactgcaggtgttgaggataatggctgtcttcctacgtctggctgtcctgacgtctgc
acgtgcacagaaggcgtcgtgcgctgcagcaacagagggctgcactctctgcccaagggc
attcccaaggacgccacggagctatacctggagggtaatatgctgacatctgtgcccaag
gagctggccggcctgaagcagctgtcactggtggacctgagcaacaacagcatcagcacg
ttggcctcgttcaccttcaacaacatgactcaactagccacactcatcctgagttataac
cagattcgctgcatcccggtaaacgccttcgacgggctgaagtcactacgcctgctcact
ctccatggtaacgacctttcaacaataccagaaggagctttcaaccacctgaccgctctg
tcccaccttgctcttggtgccaaccccctgttctgtaactgtgacctgcgctggctctct
cagtgggtcaaggctggcttcaaagagcctggcattgctcgctgtacgggacctcctgac
atgactgacaggctcctgctcaccacgccactcaacagattccagtgtaaaggtccggta
gacatcagcctgatgtctaagtgcgccccctgcctggcagcaccctgccaaaacaatggt
acctgtgcctctgatgctactggatcctacagctgctcctgcccgtatggattcaagggt
cacaactgtgaaatacccatcaatgcctgtgttagtttcccctgcactaatggaggaacc
tgccacatccagactggctttgaagaccacttcagctgcgtgtgtccaccgggttttgaa
ggccagcgttgtgagataaacccagacgactgtgaggacaacgactgtgagaacaactcc
acctgcatcgacggagtgaacaactacacctgcgtctgtccccccaactacacaggtgac
ctgtgtgacgaggtggttgactcttgtctccatggtttcgacccctgtcagcacgactca
aaatgcatccatgtcggccgcacttacaggtgcgagtgtttaccgggctatgtgggccaa
cactgcgagcaggactataatgactgtctggagaataagtgtcaacacggagcggagtgt
gtggatgctgttaacggatatatctgcgtctgtaaggagggattcagcgggcttttctgt
gaaaaccctccaccaatgatcttgcttcagaccagcccctgcgaccaatccgattgccag
aacggcgcccagtgcctggtggttgctggggaacccgtctgccgctgcatgcccggtttc
tacggcagcaaatgtgacaagatggccactgttcacttcctgggtcgggatggatatgtc
gagctgccaagtgcgaaactccgtcccaccgcgcatatttcattacaggtggctacagat
aaagacaacggtattttgttgtataaggaagaccacgaccccctggctctggagctgtac
cagggacacataagactcatctacgacatcgctacctacccacccactactgtttacagc
gtggagtcggtgaatgacgggcttttccacaccgttgagctgctgattcagaaccgctca
ctgagcctggtggtggataacggtgctcccaagagcctcggcaagctagcacgccagccc
tccgtcgaccacaacacccaactttacataggaggcgtaccctctcaggtggtggcctca
ggtttacgacccggccctgaacgttcccctcagacttttaatggttgcatccacaatgtc
cgaatcaatggggagcctcaagacctgagttaccgaggttcaggaggagcacggccacaa
ggggtcgagcccaagagtgagggctttctcgcagggtgccattcctgcagtgtatgcgcc
cagggtgcatgcagggagggaggagagacgggggtaacatgtgattgtcctccaggacgc
agcggggccctgtgtgatcagacgacggcaccaagcgcctgtcagaacagcagatgtatt
cagggtctgtgtgtgccaaagggtcagtcctacagctgccagtgcagtgaaggctaccag
ggtcagtactgtgatcgacggcaggagcctccagcctgcagagggcagcgctgcggacac
ggggagtgtcacgtgtccgaaggaggacaacccatctgccactgtcagccggggtacacc
gggccaagctgtgacacagagcttacatgtcaaggagagatggtgagggagctgctgaaa
cgctaccaccccttgaaaacatgcacgtccaccacgaagattccccgcatggattgtccc
cgatcctgccaggcagcagcgccctcgggtgtttgctgtggcgtcaccaagagcagaaga
aggaaggcggttttccgatgcacagacggcacctcgtactccgaggagatggaaactgct
ctggagtgcggctgctccaagtgccctttgtaa
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