Neobacillus cucumis: QNK12_24210
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Entry
QNK12_24210 CDS
T09078
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ncm
Neobacillus cucumis
Pathway
ncm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ncm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QNK12_24210 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncm03400
]
QNK12_24210 (mutM)
Enzymes [BR:
ncm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
QNK12_24210 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
QNK12_24210 (mutM)
DNA repair and recombination proteins [BR:
ncm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QNK12_24210 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
DZR
zinc-ribbons_6
Zn-ribbon_8
DZR_2
RNHCP
Motif
Other DBs
NCBI-ProteinID:
WHY90743
LinkDB
All DBs
Position
complement(4817513..4818340)
Genome browser
AA seq
275 aa
AA seq
DB search
MPELPEVETVRKTLKNLVLHKEIKDITVHWPKIIKNPVEIEQFIDALKGETILDVGRRGK
FLILYTNHYALVSHLRMEGKYGLYPKSEPYDKHTHVIFHFTDETDLRYRDVRKFGTMHLY
KKGEEFFRPPLFDLGPEPFDETFTRNYLSEMLKKTTRKVKPALLDQKVLVGLGNIYVDEA
LFRAGIHPERIANTLTEEETTILHQEIIHTLSEAVKKGGSTIRSYVNSQGEIGMFQLELY
AYGRKGEACKRCGTPLEKITVGGRGTHFCPSCQKI
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacttccagaagtcgaaacggtgcgaaaaacgttaaaaaatttagttcttcat
aaggaaattaaagatatcacagtccattggccgaaaatcattaaaaatcctgtagaaatc
gagcaattcattgatgccctaaaaggggaaaccattttagatgtggggagaagggggaaa
tttttaatcctatataccaaccattatgcgcttgtttcccatttaaggatggaaggaaaa
tacggactttatccaaaaagtgagccttatgataagcatacccatgtgatttttcatttt
accgatgaaactgatttaaggtatcgtgatgttcgtaaatttggaacaatgcatttatat
aaaaaaggggaagaatttttccggccgccattatttgatcttggaccagagccctttgat
gaaacctttacaaggaattatttaagtgagatgttaaaaaagacaacaaggaaagtgaaa
ccggcacttttagatcaaaaggtcctcgttgggcttggaaacatatacgtagatgaagca
cttttccgggcagggattcatccggaacggattgcgaataccttgactgaggaagaaacc
acaattcttcatcaagaaattattcatacgttaagtgaagcagtgaaaaagggcggaagt
acgatacgttcttatgtcaactctcaaggagagattggaatgtttcagcttgaattatat
gcctatggacgcaaaggcgaagcatgtaaacgatgcggtacaccgcttgaaaaaataacg
gtcggcggccgcggaacacatttttgtccaagctgccaaaagatttaa
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integrated database retrieval system
