Neurospora crassa: NCU00824
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Entry
NCU00824 CDS
T01034
Symbol
hda-3
Name
(RefSeq) histone deacetylase-3
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
ncr
Neurospora crassa
Pathway
ncr03082
ATP-dependent chromatin remodeling
ncr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
NCU00824 (hda-3)
03083 Polycomb repressive complex
NCU00824 (hda-3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncr03036
]
NCU00824 (hda-3)
Enzymes [BR:
ncr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
NCU00824 (hda-3)
Chromosome and associated proteins [BR:
ncr03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
NCU00824 (hda-3)
HDAC complexes
Sin3A-HDAC complex
NCU00824 (hda-3)
BRAF-HDAC complex
NCU00824 (hda-3)
REST complex
NCU00824 (hda-3)
SHIP complex
NCU00824 (hda-3)
MiDAC complex
NCU00824 (hda-3)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
NCU00824 (hda-3)
Heterochromatin formation proteins
Other heterochromatin formation proteins
NCU00824 (hda-3)
Chromatin remodeling factors
NuRD complex
NCU00824 (hda-3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
3880510
NCBI-ProteinID:
XP_964367
UniProt:
Q7SEB0
LinkDB
All DBs
Position
I:complement(7046029..7049316)
Genome browser
AA seq
658 aa
AA seq
DB search
MPSTFTDPAGVARDEPLYTVVHNDKKRVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLVM
NYNVYKFLEVYRAKPAVTAEMTQFHTDEYIEFLQKVTPDNMDGFMREQGKYNVGDDCPVF
DGLFEFCGISAGGSMEGAARLNRDKCDIAINWAGGLHHAKKSEASGFCYVNDIVLAILEL
LRFKKRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGELRDIGIGSGKNYA
VNFPLRDGIDDTTYSSIFQPVISAVMQYFQPEAVVLQCGGDSLSGDRLGCFNLSMRGHAN
CVNYVRSFGLPTLVLGGGGYTMRNVARTWAYETGRLVGVEMNPVLPYNEYYDYYGPDYEL
DVRSSNMENANSPEYLEKIKISVIENLKKTAPVPSVQMQDVPRQGFGMSDDQEDELDDMD
EDENKDVRRTQRQWEKERARQDEFEESDDEDMAQANGVFKPNGPQRRSILDFKNPKAVED
MDLDIGEPAPPSIAATAAAAAAKPAEPTAVDNDETMIDNDEAQPAAAEPEAEAPATTAAQ
PAVSSAAKVDEDGDVDMGEADEKPAEPEAEIKTEEIETAPAPEPEAERRPSPAAATAEPA
TEAAAAAAASPKAASPVPDANTEKPVAEEPSKVAEEASDKAPAATTDDKEKEADKPQE
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgccttccacattcaccgatcccgccggagtcgcgcgtgacgagccgttgtataccgtc
gtccacaatgacaagaagcgggtcgcctacttctacgactccgacattggcaactatgcc
tacgtgaccggccatcctatgaagccccatcgtatccgtcttgcccacagtctggtcatg
aactacaacgtgtacaagtttctcgaggtctaccgtgcaaaaccagccgttactgccgaa
atgacacagtttcacaccgacgagtacattgagtttttacaaaaggttacccccgacaac
atggacggcttcatgcgcgagcagggcaagtacaatgttggcgatgactgtcccgttttc
gacggcctgtttgagttctgcggcatcagtgccggcggaagtatggagggtgccgctcgc
ttgaatagggacaagtgcgacatcgccatcaactgggccggtggtttgcatcacgccaag
aagagcgaggctagcggtttctgctatgtcaatgatatcgtcctggctatcctagagctc
ctgcgtttcaagaagcgcgttctttacattgacatcgatgtgcaccacggcgatggtgtc
gaagaagccttttacacgacggatcgcgtcatgaccgtatccttccacaagtacggcgag
tacttccccggtaccggcgagttgcgcgacattggtatcggttccggcaagaactatgcc
gtcaacttccccctccgcgatgggattgacgacaccacctacagctccatcttccagccc
gtcattagcgctgtcatgcaatacttccaacctgaggctgttgtcctccaatgcggtggt
gacagtttgtccggtgatcgtcttggctgctttaacttgagcatgcgtggccatgccaac
tgcgttaattacgtgcggagctttggactacccactctggttctcggcggaggtggctac
accatgcgcaacgtcgcaaggacttgggcctacgaaaccggccgtttggttggtgttgag
atgaacccagtccttccttacaacgagtactacgactattacggtcccgactacgagctt
gatgtgcgttcttccaatatggagaacgccaacagcccagagtacctggagaagatcaag
atatcagtgatagaaaacctgaagaagaccgccccagttccctctgtccagatgcaggac
gttccgcgtcagggcttcggtatgtcagacgatcaggaagacgagcttgacgacatggat
gaggacgagaacaaggatgtccggcggacacagcgtcaatgggagaaggagagagctagg
caagacgagtttgaagaaagtgatgacgaggacatggctcaagccaatggtgtgttcaag
ccgaacggaccgcagcgccggtccattctcgacttcaagaaccccaaggccgtggaggac
atggatcttgatattggagaaccagctccgccctcgattgccgccaccgccgccgcggcc
gccgctaagccagcggagcctactgctgtcgacaacgatgagaccatgatcgataacgac
gaagcccaaccggccgccgctgaacctgaagccgaagcccccgcaacgacagccgcgcag
cctgcagtaagctctgcggccaaagttgacgaagatggcgatgtggatatgggcgaggcc
gatgagaagcctgcagaacctgaggcggagatcaagaccgaggaaatcgagactgcccct
gctccggagccggaggcagagcgcaggccaagtcccgccgccgccactgcggagcctgct
accgaggcagcagcagcagcagcagcctctcccaaggccgcctcgccggtaccagacgcc
aacactgagaagccagtggcagaagagccaagcaaggttgccgaggaggcatccgacaag
gcaccggcagcaacaacagatgacaaggaaaaggaggccgataagcctcaagaatag
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