Neurospora crassa: NCU01525
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Entry
NCU01525 CDS
T01034
Symbol
hda-1
Name
(RefSeq) histone deacetylase-1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
ncr
Neurospora crassa
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ncr01009
]
NCU01525 (hda-1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncr03019
]
NCU01525 (hda-1)
04131 Membrane trafficking [BR:
ncr04131
]
NCU01525 (hda-1)
03036 Chromosome and associated proteins [BR:
ncr03036
]
NCU01525 (hda-1)
Enzymes [BR:
ncr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
NCU01525 (hda-1)
Protein phosphatases and associated proteins [BR:
ncr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
NCU01525 (hda-1)
Messenger RNA biogenesis [BR:
ncr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
NCU01525 (hda-1)
Membrane trafficking [BR:
ncr04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
NCU01525 (hda-1)
Chromosome and associated proteins [BR:
ncr03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
NCU01525 (hda-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arb2
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
3873096
NCBI-ProteinID:
XP_956974
UniProt:
Q7RY64
LinkDB
All DBs
Position
II:complement(3188786..3192710)
Genome browser
AA seq
744 aa
AA seq
DB search
MVDNDNDIVMDGQDTHPATIDVSATSNGITKTEPNGHDQSAPANDEKEEKLDDEKDPFIY
PARLKRRGLLPTGCCYDDRMKLHANADFGPNPHHPEDPSRIEHIMRIFKKEGLVFTGDDE
DLKKVIRTDPRRYMWRIPARHATKEEICIVHHPEHFRWVEDLSRKPTSELRRLSTIMDQG
RDSLYVGSMTFEAALISAGGAIETCKSVVVGNVKNAFAVIRPPGHHAEFDAPMGFCLFNN
VPIAAKICQTEYPEICRKILILDWDVHHGNGIQNMFYDDPNILYISLHVYMNGSFYPGKP
DNPMTPDGSIENCGAGPGLGKNVNIGWHDQGMGDGEYMAAFQKIVMPIAHEFDPDLVIIS
AGFDAADGDELGACFVSPACYAHMTHMLMSLANGKVAVCLEGGYNLAAISKSALAVARTL
MGEPPPKMDLPKINKEAARVLAKVQAYQAPYWECMRPGIVDVQEMQSQGGQRLHDVVRSA
QRFNLSEKFGMFPLYIQRDVLFKSFENQVLVTRNASEARKLLVVIHDPPELHAQPDPLDN
SLQPHDSWITDSIPQYIQWAINRKIGVIDINIPQYITHPEDTESLAPKVDERTQQAQIQE
LMCYIWDNYLQLYDNVDDIFLMGVGNAYLGVKLLLINRDVKSRISGVVNFVNGNLRPVKS
DVDTDLSSWYKDNSRVYVSADHACWADADLSRKVMKRRFGSVIRSNVSGLGRMMNEHFKD
VQDWMVDRMVPEEEKLGDEMVEDA
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacaacgacaatgatatcgtgatggacggccaagacactcatcctgccacaatt
gacgtgtcggcaacaagtaatggcatcaccaaaacagaaccgaatggtcatgatcagtcc
gcgccagccaacgacgagaaggaggaaaaactggacgacgagaaagatcccttcatctat
ccggctcgcctaaagcgaagaggtctccttccgacaggatgctgttacgacgatcgtatg
aaacttcacgcaaatgccgactttggtccaaatccccaccatcccgaagacccgtctcgt
atcgagcatatcatgaggatattcaagaaggaaggccttgtgttcactggcgacgatgag
gatctcaagaaggtcatccgcaccgacccgaggaggtacatgtggcgcattccggcccga
cacgcaaccaaggaggagatctgcatcgtccaccaccctgagcatttccgatgggtggaa
gatctgtcacggaaaccgacatcggagctccggcgcctctcgaccattatggatcaaggg
agagactccctgtacgtcggcagtatgacattcgaggcagcactgatctcagctggaggt
gctattgagacctgcaagagtgttgttgtcggtaatgtcaagaatgctttcgctgtgatc
cgtccgccaggccatcatgccgagttcgacgccccgatgggcttctgtctcttcaacaac
gtcccaatagcagccaagatctgccagaccgaataccccgagatttgccgcaagatactt
attttggactgggacgttcaccatggcaatggcatccagaacatgttctacgacgacccg
aatatcctgtatatctcgctacacgtctatatgaacggctcgttctaccctggaaaaccg
gataacccgatgacgccagatggcagtattgagaactgtggagcagggccaggcttggga
aagaacgtcaacattggctggcatgaccaaggaatgggtgacggcgagtacatggcagct
ttccaaaagattgtcatgccgattgcccacgagtttgatcccgacctcgtcattatctcc
gccggattcgacgctgcggacggcgacgagctgggtgcttgctttgtatcgccagcttgc
tacgctcacatgacacatatgctcatgtctttggccaacggtaaggtggcggtctgtcta
gaaggcggttacaaccttgcggccatttccaagtcagccttggccgtagcccgtacgctc
atgggcgaaccacccccaaagatggatctccccaaaatcaacaaagaggctgctcgagtt
ctggcaaaggtgcaggcgtaccaagcaccgtactgggaatgcatgcgaccaggcattgta
gatgtccaggagatgcagagtcaaggtggccaaaggttacatgatgttgtccgctcagct
cagcgcttcaacctttcggagaagtttggcatgttcccgctgtatatccagcgtgacgtg
ctgttcaagtcctttgagaatcaggtgttggttacacggaacgcaagtgaagcccgcaag
cttcttgtagttatccatgacccaccagaactgcatgcccagccagatccccttgacaac
agtctccagccacacgactcctggattacggacagcatcccgcagtacatccagtgggcc
atcaacaggaagattggcgttatcgatatcaacattcctcaatacattacacatccagag
gacacggagtcattggcccccaaggtcgacgagcgaacgcaacaagcacagatccaggag
ctcatgtgctacatatgggataactaccttcaactctacgacaatgtggacgacatcttc
ctcatgggtgtcggcaacgcttaccttggagtcaagctcctgctcattaacagagacgtg
aagtcgcgaatctcgggagtcgtcaattttgttaacggcaacctccgtcctgtgaaatcg
gacgtcgacacggatctttcatcgtggtacaaggataactctcgggtctatgtgtcggcg
gaccatgcatgttgggcggatgccgacttgagccggaaggttatgaagcgccggttcggt
tcggtcattcgcagcaacgtgagcgggttgggtcgcatgatgaatgagcactttaaggac
gttcaggattggatggtggataggatggtaccggaggaggagaaactgggggatgagatg
gtggaggacgcgtga
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