Neurospora crassa: NCU07837
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Entry
NCU07837 CDS
T01034
Symbol
csb
Name
(RefSeq) Cockayne syndrome B ortholog
KO
K10841
DNA excision repair protein ERCC-6
Organism
ncr
Neurospora crassa
Pathway
ncr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ncr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCU07837 (csb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncr03036
]
NCU07837 (csb)
03400 DNA repair and recombination proteins [BR:
ncr03400
]
NCU07837 (csb)
Chromosome and associated proteins [BR:
ncr03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
NCU07837 (csb)
DNA repair and recombination proteins [BR:
ncr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
NCU07837 (csb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
3879106
NCBI-ProteinID:
XP_962958
UniProt:
Q7SBC8
LinkDB
All DBs
Position
III:1031459..1035777
Genome browser
AA seq
1173 aa
AA seq
DB search
MDPDTTQLSKTTEALPELTPNVEHTEAMTLDNKNSAADTQSAPNADELDEEAALKKLTEN
VRDQDDLERDITLQASRALIEAEDKRDQKRIEKAEATRTRLENQKKTQQQKLRPGITNPT
ARLRIQQEIARIDAEIELCDKDIADFRARIEQRNQQGETGTLAPATGKILPNETQREYLI
RTGKITPFAKFGGPRPAEVEGDLANAIVDAEDEAVAEELEEKENDGPRSHQNLRLPGFAD
ENEVATVAVADDFSLRPRKRRRVQPPPESDDEFVLGESGSEAASPEADASDDYDDYEMAG
TTLKKRKKAVREADGDDKVDLTGIDDGNEKVYQARLKGWVTRRSNARRARQQRLGQPIDK
DDDGTEEWFKPAPDQPDHQFENGLKLPGDIYPALFDYQKTSVQWLAELYAQQVGGIVGDE
MGLGKTVQLISFVAALHYSQKLDKPVIVVAPATVLRQWVNEFHRWWPPLRVSILHSSGSG
MLNVRNEGALDDREDDYGKRKPKKSSQAAKKIVDRVVKHGHVLVTTYAGLQTYGDILIPV
DWGYAVLDEGHKIRNPNTAITIYCKELRTPNRVILSGTPMQNNLTELWSLFDFIYPMRLG
TLVAFRNQFEIPIKLGGYANATNLQIMTAQKCAETLKETISPYLLQRLKVDVAADLPKKS
EQVLFCKLSKPQREAYELFLKSDDMTAILNRTRQSLYGIDILRKICNHPDLLDPRLKDDP
SYKWGSTSKSGKMAVVKSLLPMWKRLGHKTLLFCQGTQMLDIIEAFVRRQDGINYLRMDG
KTPVKDRQTLVDQFNNDPDLHLFLLTTKVGGLGTNLTGANRVIIFDPDWNPSTDVQARER
AWRLGQKKEVTIYRLMTAGTIEEKIYHRQIFKQFLSNKVLKDPKQQTSFNLNDLHDLFSL
SSYEDGKTETAELFKGSEVKRLPSGPTEIVLPGNDTPVLRAPGASKPVEVKDESTSEDET
SNLRHLEGVAGLETFNDDGPAPAPNEEDRLMEGIFARSIHSALEHDEIMNGKKPTVKADR
RILQAEADRVAAQAALALRRAGEEARNVPIGTVTWTGEYGEAGRPAPRHERGGFSSVGVR
GAAGGAGPSRASRPATPSDKRNLKAEDFERMIPAFIKRHGGRVPSKSLVDHFNHYCTGAR
QADMFKIALEKVAKLEKKGSSMRGIWTVRPEYH
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggaccctgatacaactcaattatcgaagacaaccgaggccttgcccgagttgacgccc
aatgtcgaacacacagaagcaatgacactcgacaacaaaaactcggccgctgatacacaa
agtgcgccaaatgctgacgagctcgacgaagaggctgcgctcaagaaacttactgaaaat
gttcgagaccaagacgatttggaacgtgatatcaccctgcaagccagccgtgccttgatc
gaagccgaagacaaacgagatcagaaacgcatcgaaaaggctgaggccactcgtacgaga
ctcgagaaccagaagaaaacacagcaacagaaactgcggcctggtatcaccaatccaacc
gcacgattacgcatacaacaggagatagcgcgaattgatgccgaaatcgaactttgcgac
aaagacattgccgatttccgtgcccgcatcgaacagcgcaaccagcagggcgagacgggt
acactggccccggccaccggcaaaatactccctaacgagacccaacgagaatatctcatc
cgaacgggcaagatcacgccgtttgctaaatttggtggacccagacctgccgaggttgag
ggtgatctcgccaacgccattgtcgatgcagaagacgaggctgtcgctgaagagttggaa
gaaaaggaaaacgacggccctcgatcccatcagaatcttcgtctccctggctttgccgac
gaaaatgaggtcgctaccgtagctgtcgcagacgatttttctctacgtccccgaaagagg
cgtagggtccagccgccgcccgaatccgacgatgagtttgtgctgggagagtctggatct
gaagcggcttctcctgaggccgacgcatccgacgattacgatgattatgaaatggcgggc
actacactcaagaagcggaagaaagcagtcagagaagccgatggtgatgacaaggtcgat
ctgactgggatcgatgatggcaacgaaaaagtctatcaagcaagactgaaaggctgggta
acgcgtaggagcaatgcacgacgggctcgtcagcagaggctcggccagccaattgataag
gatgatgatggaacagaggaatggttcaagccagcgcctgaccagcctgaccaccagttc
gaaaacgggctgaaattgccaggtgacatttacccagctctcttcgactatcagaagacc
agcgtacagtggctagctgagctgtacgcgcagcaagttggaggtatagttggagatgag
atgggtttaggaaagactgtgcaactgatttctttcgtggctgcgttacactacagtcaa
aagctcgacaaacccgtcattgttgtagccccggcaacagttttgcgtcaatgggtaaac
gagtttcaccgctggtggccaccacttcgagtatccatccttcactcgtctggcagtggc
atgctcaatgtccgcaacgaaggagcgcttgatgacagagaggatgactacggcaagaga
aagcctaaaaagtccagccaggctgcaaagaagatcgtcgatcgcgttgttaagcatggc
catgtgctggtgacaacttatgccggtttgcaaacgtacggcgatatattgatcccggtc
gactggggctatgctgttctggacgaaggacataaaatccgaaatccaaacacagcaatc
accatttactgcaaggaacttcggacgcccaaccgtgtgattctttccggcacgccaatg
cagaacaacttgacagagctatggtctctctttgatttcatctaccccatgcgactcggc
accttggttgcctttcgaaatcagttcgagatcccgatcaaacttggcggttatgccaac
gcaaccaaccttcagatcatgactgctcagaaatgtgcagagacgttgaaagagaccatc
agcccctacctacttcagcggctcaaagtagacgtggctgccgatttacccaagaaaagc
gaacaggtcctattttgtaagctgtccaagccccagcgcgaggcgtacgagctattcctc
aagtcggatgacatgactgctattctcaacaggacgcgccagtccctctacggtattgat
atcttgcgtaaaatatgtaatcatcccgatttgcttgatccgcggctcaaagatgatccc
tcttacaagtggggcagtaccagcaagtcggggaaaatggcagtggtgaagtcattactt
cccatgtggaaacgtctaggccataaaacgctgctgttctgccagggtactcaaatgctg
gacatcatcgaggcatttgtgaggcgccaggatggcatcaactacctacgtatggatggc
aagacgcccgtcaaagatcggcagacgcttgtcgaccagttcaacaatgacccggactta
catctcttccttttaaccaccaaagtgggcggacttggcaccaacctgacgggagctaac
cgggtcatcatctttgacccagactggaacccatcaaccgatgtccaggccagagaacgt
gcatggcggttgggacaaaagaaggaagtcactatctaccggcttatgacagctggaacc
atcgaagaaaaaatctaccaccgccagatcttcaagcagttcctgtcaaacaaggtgttg
aaggacccgaagcagcagacctcattcaacttaaatgaccttcatgacctgttcagtcta
agctcgtatgaagacgggaagaccgagacagcagagctatttaagggcagtgaagtcaaa
cgcctgccttcaggacccacggagatagtcttgcctggtaacgacacgccggttctccgg
gcccctggagccagcaaaccagtggaagtcaaggacgaatccacaagtgaggacgagaca
agcaacctccgtcatcttgaaggagttgcaggattggaaacattcaacgacgatggaccg
gcccctgcaccgaacgaggaggaccgtttgatggagggtatctttgcacgttctattcac
agcgctcttgaacacgacgagatcatgaacggcaaaaagccaacggttaaggcagaccgc
agaattctccaagcagaagcggatcgagttgctgctcaagcggccttggctctccgccgt
gcgggtgaggaagccagaaatgtgcccatcggcacggtcacttggacgggcgagtacggc
gaagctggtcgtccggcgccccgtcatgaacgcggaggtttcagctcagtaggtgttcgc
ggtgcagcaggcggtgcaggtccgtcgagagcatcgagaccggcaacaccgtctgataaa
aggaacctgaaagcagaggactttgaaagaatgattccggcgttcattaaacgacatggt
ggcagggtcccatcgaagtcgctcgtcgaccacttcaatcactattgcacgggagcgagg
caggcagatatgttcaaaattgctctggagaaggtggccaagttggagaagaaggggtcg
agcatgcggggcatttggactgttcgtccggagtatcattga
DBGET
integrated database retrieval system
