Nonomuraea coxensis: Nocox_19410
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Entry
Nocox_19410 CDS
T07466
Symbol
pel2
Name
(GenBank) Pectate trisaccharide-lyase precursor
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ncx
Nonomuraea coxensis
Pathway
ncx00040
Pentose and glucuronate interconversions
ncx01100
Metabolic pathways
ncx02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ncx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Nocox_19410 (pel2)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Nocox_19410 (pel2)
Enzymes [BR:
ncx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Nocox_19410 (pel2)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
F5_F8_type_C
Motif
Other DBs
NCBI-ProteinID:
QYC41491
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Position
complement(4147509..4149113)
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AA seq
534 aa
AA seq
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MSKFDRRGVAAGGPRTRRAVAARLAAALAAVTAAAAVGAALPGLQASAAATGTATGYAAV
NGGTTGGAGGQTVRATTGTAIHQALCNRASSSTPITIEVEGTINHGNTAKVSGGSCNTAA
GVIELKQISNVTIVGVGSGAVFDQLGIHIREAGNIIIQNVTVRNVKKSGSPTSNGGDAIG
MESDVRNVWVDHVTLEASGGESEGFDGLFDMKDNTQYVTLSYSVLRNSGRGGLIGSSESD
RSNGYVTFHHNLYENIDSRTPLLRGGIAHIYDNHYVNLHESGINSRAGARAKVENNYFED
SKDVLGTFYTSEAGYWQVAGNIFDNVTWSAPGSDNNPAGPNVQSTTSVSVPYSYSLDAAS
CVPDVVRRTAGADKGLQVSNGSCTPQSPTASPTSSPTSSPTSSPTTTPTSSPGGTNLSIG
AGSDGSSKASGTSYGNVRDGDMSTYWSPSGSTGDISIKWGSATTVSSVVIREAAGSSGVI
GSWQLLNAGTGAVLKSGSGAGTITFTPTSLTKITFRITGASGTPKVAEFETYAS
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagttcgacaggaggggcgtggccgccggtgggccgaggacgagacgggccgtc
gcggcgcggctcgcggcggcgctggccgcggtgaccgccgccgccgcggtcggcgcggcc
ctgcccggcctccaggcgtcggcggcggcgacgggcaccgccaccggctacgccgccgtc
aacggcggcaccaccggcggcgcgggcggccagacggtacgcgccaccacgggcaccgcg
atccaccaggccctgtgcaaccgggccagcagcagcaccccgatcaccatcgaggtcgag
gggaccatcaaccacggcaacaccgcgaaggtgtcgggcgggagctgcaacaccgccgcc
ggcgtgatcgagctcaagcagatcagcaacgtcacgatcgtcggggtcggcagcggagcc
gtcttcgaccagctcggcatccacatccgggaggccggcaacatcatcatccagaacgtg
accgtcaggaacgtcaagaagtccggctcccccacgtccaacggcggcgacgccatcggc
atggagagcgacgtccgcaacgtgtgggtcgaccacgtcacgctggaggcgtcgggcggc
gagtcggagggcttcgacggcctgttcgacatgaaggacaacacccagtacgtgacgctg
tcctacagcgtcctgcgcaactccggccgcggcgggctcatcggctccagcgagagcgac
cgctccaacggctacgtcaccttccaccacaacctgtacgagaacatcgactcccgaacc
ccgctgctgcggggcggcatcgcccacatctacgacaaccactacgtgaacctgcacgag
tccggcatcaactcccgcgccggagcccgcgccaaggtggagaacaactacttcgaggac
tccaaggacgtcctcggcaccttctacaccagcgaggccggctactggcaggtcgcgggc
aacatcttcgacaacgtgacctggtccgcccccggctcggacaacaaccccgccgggccg
aacgtgcagtccaccacctccgtcagcgtcccctactcctacagcctcgacgcggcgagc
tgcgtgccggacgtcgtccggcgcacggcgggcgccgacaagggcctgcaggtgtcgaac
ggcagctgcacgccccagtcccccacggcgagccccacgtcgtcacccacgtcctcgccg
acgtcctcgcccaccacgaccccgacctcgtcgcccggcgggaccaacctcagcatcggg
gccggctccgacggctccagcaaggcgagcggcacgagctacggcaacgtgcgcgacggc
gacatgagcacctactggtcgccgtccggctcgaccggcgacatctccatcaagtggggg
tcggccacgacggtctccagcgtcgtcatccgtgaggcggccggctcctcgggggtcatc
ggctcgtggcagctcctcaacgccggcaccggcgccgtgctgaagtcgggcagcggcgcg
gggaccatcaccttcacccccacctcgctcaccaagatcaccttcaggatcaccggcgcg
tccggcaccccgaaggtcgccgagttcgagacctacgcctcgtga
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