Nocardiopsis dassonvillei: Ndas_3589
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Entry
Ndas_3589 CDS
T01248
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nda
Nocardiopsis dassonvillei
Brite
KEGG Orthology (KO) [BR:
nda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nda03016
]
Ndas_3589
Enzymes [BR:
nda01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Ndas_3589
Transfer RNA biogenesis [BR:
nda03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Ndas_3589
Prokaryotic type
Ndas_3589
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DKCLD
TruB-C_2
Saf-Nte_pilin
Alanine_zipper
Motif
Other DBs
NCBI-ProteinID:
ADH68990
UniProt:
D7B4J5
LinkDB
All DBs
Position
1:complement(4302400..4303287)
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AA seq
295 aa
AA seq
DB search
MAESGVVVVDKPADWTSHDVVARTRGLARTRRVGHAGTLDPMATGVLVLGIEKGTKLLGH
LTLTEKVYEATIRLGLTTNTDDAEGEPLVRADASGVGEEAVRAAVGRLTGQIQQIPPQVS
AIKVDGKRAYKSAREGKEVALKARTVTVAEFTVTDVRRVLDADGEFVDVDASVTCSSGTY
IRALARDMGADLGVGGHLTALRRTRVGPYDLSRARTLDELAEEFTQVPLAEAVAAAFPAR
ALSGDEEQRIRHGNRIEPDESGSGPVGLFAQDGRVIALGENRRDHMKPVVVFEPA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggccgagagcggcgtcgtggtcgtcgacaagcccgccgactggacctcgcacgacgtg
gtcgccaggacgcgcgggctcgcgcgcacccgcagggtcggccacgcggggaccctggac
ccgatggccaccggggtcctggtgctgggcatcgagaagggcaccaagctcctgggccac
ctgaccctgacggagaaggtctacgaggcgacgatccgcctcggtctgacgaccaacacc
gacgacgccgagggcgagcccctcgtgcgcgcggacgcctccggggtcggagaggaggcc
gtgcgcgccgccgtcggcaggctcaccgggcagatccagcagattccgccccaagtcagc
gcgatcaaggtggacggcaagcgcgcctacaagtcggcgcgcgagggcaaggaggtggcc
ctcaaggcccgcacggtcaccgtcgcggagttcacggtcaccgacgtgcgccgggtcctt
gacgccgacggggagttcgtggacgtggacgcctccgtcacctgctccagcggcacctac
atccgtgcgctggcccgtgacatgggcgccgacctgggcgtgggcgggcacctgacggcg
ctgcggcgtaccagggtgggcccctacgacctgtcccgggcgcgcacgctggacgagctg
gccgaggagttcacgcaggtcccgctggccgaggccgtggccgcggccttcccggcgcgc
gccctgagcggggacgaggagcagcggatccggcacggcaaccggatcgagccggacgag
tccggaagcggcccggtcggcctcttcgcccaggacggccgcgtcatcgccctgggggag
aaccgccgcgaccacatgaagcccgtggtggtcttcgaacccgcctga
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