Nitrospira defluvii: NIDE0474
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Entry
NIDE0474 CDS
T01281
Symbol
ddlA
Name
(GenBank) D-alanine-D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
nde
Nitrospira defluvii
Pathway
nde00470
D-Amino acid metabolism
nde00550
Peptidoglycan biosynthesis
nde01100
Metabolic pathways
nde01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NIDE0474 (ddlA)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NIDE0474 (ddlA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
NIDE0474 (ddlA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nde01011
]
NIDE0474 (ddlA)
Enzymes [BR:
nde01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
NIDE0474 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:
nde01011
]
Precursor biosynthesis
Amino acid ligase
NIDE0474 (ddlA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
ATP-grasp_3
ATP-grasp_4
ATPgrasp_ST
RimK
ATPgrasp_YheCD
CPSase_L_D2
ATPgrasp_Ter
ATP-grasp
Motif
Other DBs
NCBI-ProteinID:
CBK40249
UniProt:
D8PAJ0
LinkDB
All DBs
Position
422815..423837
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AA seq
340 aa
AA seq
DB search
MRRLRVLVLMHKDLVPPDQLNGQHLEGAAWKTEYDVVSTLRKLGHEVQPLGVKSDLEVIR
AAVEDWKPHIAFNLLEEFDGRAVYDQNVVSYLELMRIPYTGCNPRGLMLARDKALAKQVM
SYHRIPYPEFMVVPLHRMVRRPKYLPFPLIVKSISEEASLGISQASIVDDDEKLRERVAF
IHDNVGTGALVERYIEGRELYVGVMGNAHLQVFPVWELVMDKMPEEARRIATERVKWSRK
YQDKYGICSCEARNLPDGVVDHVQHLAKRVYRALGLSGYARIDMRMDQDGNVYVLEANPN
PQIASGEDFADSAEKADLAYKDLLQELLHVGLRWRPAQAA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgagacgattgcgcgtgcttgtgttgatgcataaagatcttgtccctcccgaccaactg
aacggacagcaccttgaaggggcggcctggaaaaccgaatacgatgtcgtatccaccctt
cggaagctcggccatgaggtgcagccgctcggggtcaagagcgatctggaagtgattcgt
gcggccgtcgaggattggaagccccatatcgcgtttaatttgctggaggagttcgacggg
cgggcggtctacgaccagaacgtggtgtcctacctcgagttgatgcgcatcccctacacc
ggctgcaatccacgcggcctcatgctggcgcgggacaaggcgttggcgaagcaggtgatg
tcgtaccatcgtattccgtacccggagttcatggtggtgcctttgcatcgcatggtgcgg
cgacccaaatacctgcccttcccgttgatcgtgaagtcgatcagcgaagaggcttcactc
ggaatttcgcaggcctctatcgtcgatgacgatgagaaactgcgggaacgggtggccttc
atccacgacaatgtcggcaccggagccttggtcgagcgctatatcgaaggacgagagctg
tatgtcggggtcatgggcaatgcgcatctgcaagtgtttccggtctgggaactcgtgatg
gacaagatgcctgaggaggcccgccgcatcgcgacggagcgggtaaagtggagccgcaaa
taccaggacaagtacggcatctgctcgtgcgaagcgaggaacctcccggacggcgtcgtc
gaccatgtccagcatctggccaagcgcgtctatcgcgcattggggctgagcggctacgct
cgcatcgatatgcggatggatcaagacggcaacgtgtacgtgcttgaagccaatcccaat
cctcagatcgccagcggcgaagatttcgccgactcggccgaaaaagccgacctcgcctac
aaagacctcctgcaggaattgttgcatgtggggctccgatggcgccccgcccaagccgcg
tag
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