Nitrospira defluvii: NIDE1881
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Entry
NIDE1881 CDS
T01281
Symbol
rlp
Name
(GenBank) Ribulose bisphosphate carboxylase-like protein (RuBisCO type IV-like protein)
KO
K25035
S-methyl-5-thioribulose 1-phosphate isomerase [EC:
5.3.3.23
]
Organism
nde
Nitrospira defluvii
Pathway
nde00270
Cysteine and methionine metabolism
nde01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nde00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
NIDE1881 (rlp)
Enzymes [BR:
nde01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.23 S-methyl-5-thioribulose 1-phosphate isomerase
NIDE1881 (rlp)
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Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
Motif
Other DBs
NCBI-ProteinID:
CBK41608
UniProt:
D8PEE9
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All DBs
Position
complement(1773477..1774589)
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AA seq
370 aa
AA seq
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MEYRLHGSAADARRRADLLCIDQTVEAADHVIPSGAIRDQLLGRVIQLEVITPDSHRAVL
SFPVELLDGTMSALLHMIIGMAGLQGQIRVTDLSLPDAVASRWTRPRYGSRGLRDLLRVP
RRPLICAVLKPLGYSPQQLADLAHEFALGEVDLIKDDQSLRDHPFCRFDERIARCAEAIA
KASRQTGKRCLYAPHISGPWPSLVEQAAKAMQAGARALLLCPGLIGFDAVASLAQLSSLS
LPLLAHPDFLGSHYVTPDSGIAPAMLFGLLPRLAGADVTIYPTYGLNYPISEEDCRQIAA
ACRRALGGCPPILPTAAGRMTASRIREMVTLYGSDIVFILGSDLRRGPTPIRSACLDFRR
LVEAETCSSP
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
gtggagtatcgtctgcacggatcggccgccgatgcacgcaggcgggcagacctgctctgc
atcgaccagaccgtcgaagcggccgatcatgtcattccctccggagcaattcgggatcag
cttctgggccgggtgattcagcttgaggtaatcacccccgactctcaccgcgcagtgctc
agtttccccgtcgaactgctcgacgggaccatgagcgctctccttcacatgatcatcggc
atggccggcctgcaaggacagattcgcgtcacggacctgtcattgcccgatgcggtcgcc
tcccggtggacgcgacctcgatacggctcgcgcggtctccgcgacctgctgcgagtcccc
cgacgtccactgatctgcgcggtattgaagccgctcgggtattctccacagcagctggct
gacctggctcacgagtttgccctgggtgaggttgatctgatcaaagacgaccagagtctg
cgcgatcaccctttttgccggtttgatgagcggatcgcccgctgcgccgaagccatcgcc
aaggcttcgcgccagaccggcaaacggtgtctctatgcgccgcatatctccggcccctgg
ccctctctcgtggaacaggccgccaaggcaatgcaggcaggcgcgcgtgcgctcctgctc
tgccccgggctgatcggttttgacgccgtagcttccctggctcagctgtcatcgttgtcg
ctgcccctcctcgcccatccggactttctcgggagccactatgtgacgccggacagcggc
atcgctcccgcgatgctcttcggtcttctcccgaggctggccggcgccgatgtcaccatc
tacccgacctatggcctgaactatccgatatcggaagaggactgtcggcagattgccgcg
gcatgccggcgagcactcggcggctgcccccccattctcccgaccgccgcaggaagaatg
accgcgtcgcgtattcgcgagatggtcaccctctacggttcggacatcgtctttattctt
ggcagcgacctacgacgagggccgacaccgatccgctctgcctgtctggattttcgtcgc
cttgtcgaagcggagacatgctcatccccctga
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