Nocardioides dokdonensis: I601_2073
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Entry
I601_2073 CDS
T04431
Symbol
xthA
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ndk
Nocardioides dokdonensis
Pathway
ndk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ndk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
I601_2073 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ndk03400
]
I601_2073 (xthA)
Enzymes [BR:
ndk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
I601_2073 (xthA)
DNA repair and recombination proteins [BR:
ndk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
I601_2073 (xthA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ANH38501
UniProt:
A0A1A9GLZ2
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All DBs
Position
complement(2156810..2157589)
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AA seq
259 aa
AA seq
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MRLATWNVNSLRSRIDRVEAFLTRHDVDVLALQETKARLDQLPLMGLQSLGYEVAAAGTN
QWNGVAVISRVGLDDVEVGFPDMPGFGDPVTQEARAIGATCGGVRVWSLYVPNGRKIDDP
HYAYKLDWLARLRAAARDWSASPTALVGDWNIAPRDEDVFDIAQFKTSTHVTAPERAAFE
GFLEDGYADLARPFTPEPDSYTYWDYYRQRYERNRGMRIDFLLGSPALAARTTGAFVDRD
ERAGKGASDHAPVVVDLAD
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcctggctacctggaacgtcaactccctccgctcccgcatcgaccgcgtcgaggcc
ttcctgacccggcacgacgtcgacgtgctggccctgcaggagaccaaggcccgcctcgac
cagctgccgctgatgggactgcagtcgctgggctacgaggtcgcggccgccggcaccaac
cagtggaacggcgtggccgtcatcagccgcgtcggcctcgacgacgtcgaggtcggcttc
cccgacatgcccggcttcggcgacccggtcacccaggaggcccgagccatcggcgcgacg
tgcggcggcgtacgggtgtggagcctgtacgtgcccaacggtcgcaagatcgacgatccg
cactacgcctacaagctcgactggctcgcccggctgcgcgcggccgcccgcgactggagt
gcgagcccgaccgccctggtcggggactggaacatcgccccgcgcgacgaggacgtcttc
gacatcgcccagttcaagaccagcacccacgtcaccgcacccgagcgggcggccttcgag
gggttcctcgaggacgggtacgccgacctcgcccgtcccttcacccccgagcccgacagc
tacacctactgggactactaccgccagcgctacgagcgcaaccgcggcatgcgcatcgac
ttcctgctcggctcgccggcgctggcggctcgcaccaccggcgcgttcgtcgaccgcgac
gagcgcgccggcaagggtgcctccgaccacgcgccggtggtcgtcgacctggccgactga
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