Nocardioides dokdonensis: I601_2502
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Entry
I601_2502 CDS
T04431
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ndk
Nocardioides dokdonensis
Pathway
ndk00470
D-Amino acid metabolism
ndk00550
Peptidoglycan biosynthesis
ndk01100
Metabolic pathways
ndk01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ndk00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
I601_2502 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
I601_2502 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
I601_2502 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ndk01011
]
I601_2502 (ddl)
Enzymes [BR:
ndk01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
I601_2502 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
ndk01011
]
Precursor biosynthesis
Amino acid ligase
I601_2502 (ddl)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
RimK
Motif
Other DBs
NCBI-ProteinID:
ANH38918
UniProt:
A0A1A9GKV1
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All DBs
Position
2606123..2607202
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AA seq
359 aa
AA seq
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MTETPPRKIRVALVFGGRSGEHAISAATAGGVMKAIDTDVYDVLPVGITREGRWVLASGD
ASRWQLSAGNLPEVTADSGREIASLSEAGPVDVVFPLLHGPYGEDGTIQGLLELAGVRYV
GAGVLASAVGMDKHYMKLVFAGHGLAVGPYVVVRPGDWERRQSEVVDRIQAELDFPVFVK
PARAGSSLGVTRVDDVTGLADAIEEARFHDPKVLVEQGLQGREIECAVLGGRQGGPPRAS
VPGEIVVDHGAASFYDFEAKYLSDSQARTEAPADLPDDVAERVREVAVQAFEAIGGEGLS
RVDVFVARDGEVVVNEINTMPGFTPISMYSKMWEASGLSYTELVDELIQLALERPLGLR
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagacccctccccgcaagatccgggtggccctcgtcttcggcggccggtcgggc
gagcacgccatctccgccgccaccgccggtggcgtgatgaaggcgatcgacaccgacgtc
tacgacgtgctgccggtcggcatcacgcgcgagggccggtgggtcctggccagcggtgac
gcgtcccgctggcagctcagcgccggcaacctgcccgaggtcaccgccgactccggccgg
gagatcgccagcctcagcgaggccggccccgtggacgtcgtcttccccctcctgcacggg
ccctacggcgaggacggcaccatccagggcctcctcgagctcgccggggtccgctacgtc
ggtgccggcgtcctggcctccgcggtcgggatggacaagcactacatgaagctggtcttc
gcgggccacggcctggccgtggggccgtacgtcgtcgtgcgacccggcgactgggagcgg
cgccagtccgaggtcgtcgaccgcatccaggccgagctggacttcccggtcttcgtgaag
ccggcccgggccggctcgtcgctcggggtcacccgggtcgatgacgtgaccgggctcgcc
gacgccatcgaggaggcccgcttccacgacccgaaggtcctcgtcgagcagggactccaa
ggccgcgagatcgagtgcgccgtcctgggcggtcgccagggcggtccgccgcgcgcctcg
gtgccgggcgagatcgtcgtcgaccacggcgcggcgtcgttctacgacttcgaggccaag
tacctctccgactcccaggcgcgcaccgaggcgccggccgacctgcccgacgacgtcgcg
gagcgggtgcgcgaggtcgcggtccaggccttcgaggcgatcggcggcgaggggctctcg
cgggtcgacgtcttcgtcgcccgggacggcgaggtggtcgtcaacgagatcaacacgatg
cccgggttcaccccgatctccatgtactcgaagatgtgggaggcctcgggcctgtcctac
accgagctggtcgacgagctcatccagctcgcgctggagcgccccctcggcttgcgctga
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