Novosphingobium decolorationis: HT578_12320
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Entry
HT578_12320 CDS
T07993
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
ndr
Novosphingobium decolorationis
Pathway
ndr02020
Two-component system
ndr02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HT578_12320
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
HT578_12320
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ndr02035
]
HT578_12320
Bacterial motility proteins [BR:
ndr02035
]
Flagellar system
Chemotaxis proteins
MCPs
HT578_12320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
ATG16
Filament
CENP-F_leu_zip
Motif
Other DBs
NCBI-ProteinID:
QVM84370
LinkDB
All DBs
Position
2670387..2672240
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AA seq
617 aa
AA seq
DB search
MRRYLLFAAARPRAACKDARRDAQKGWSETVIKDQTRKAGRGLTTLVALAVLLTGLAVYM
IRFGGPIERKHALQNEMLADILPPPAFVVEPYLQVTQATANPGKAPLVLDELERLEGEFR
ERQAYWQENEVPPEVRDQLARVIRVADHFWRIVDGKFAKAAKGRDRDAMYWIQERELSPI
YDRQRHEVLKLVALSRAFTTAEMRTDTWITAACLLASALIALLLAAAIPYAARLIDRRIV
TPLENASRSFGHLASGDFDIVIEGTERRDEFGTMARSMDVFRRAGIEKASADEEQRRVVE
NVSVGLHKLAGKDLEYRITEPFPESYEALRTNFNEAVSALCKAMGTVRVGASSVMNAISE
IRAGSDDLAQRNQQQAASLEETAAAMAQVTDRIRESAGTAAQAQEAITTAHDEASEGGEV
VRAAVSAMSAIETSAREISTIIDLIDGIAFQTNLLALNAGVEAARAGDAGKGFAVVANEV
RDLAQRSADAAHQIKELITKSSAQVEGGVELVGETGTRLEAILAQVSELRSFIAQMATSA
RQQASDLDQVNTSVGEMDRMTQQNAAMVEETTAATRSLESEARGLSELMAGFRTRMREDR
PEIAGQGEPLRRTSAAA
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
gtgcgccgttacctcctcttcgcggcagcccggccacgggccgcctgcaaggacgcgcgc
cgggatgcgcagaagggatggagcgagacggtgatcaaggaccagacccggaaggccgga
cgcgggctcaccacgctcgttgcgctcgccgtgctgctgaccggccttgccgtctacatg
atccgctttggcggtccgatcgagcgcaagcacgccctccagaacgagatgctggccgac
atcctgcccccgccggcctttgtcgtcgaaccctacctccaggtcacacaggccaccgcc
aacccggggaaagccccgctcgtccttgacgagctggagcgcctcgaaggcgaattccgc
gaacgccaggcctattggcaggagaacgaggtgcctcccgaagtgcgcgaccagctggcc
cgcgtgatccgggtcgcggaccatttctggcgcatcgtcgatggcaagttcgccaaggcc
gccaagggccgcgaccgggatgccatgtactggatccaggagcgcgaactctcccccatc
tacgaccgccaacgccacgaagtgctcaagctcgtcgccctctcgcgcgccttcaccacg
gccgagatgcgcaccgacacctggatcaccgccgcctgcctgctggccagcgctctcata
gcgctgctgctggcggccgccatcccctatgccgcccggctgatcgaccgtaggatcgtc
acccctctggagaacgccagccgcagcttcggacacctcgcctcaggcgacttcgacatc
gtcatcgaaggcaccgagcggcgcgacgagttcggtacgatggcccgctcgatggacgtc
ttccgccgcgccgggatcgagaaggccagcgcggacgaggaacagcggcgcgtggtcgag
aatgtctcggtcggcctccacaagcttgcgggcaaggacctcgaataccgcatcaccgaa
cccttcccggaaagctacgaggcgctgcgcacgaacttcaacgaggccgtctccgcactg
tgcaaggccatgggcaccgtgcgcgtcggggcctccagcgtgatgaacgcgatctcggag
attcgcgcgggctcggacgaccttgcccagcgcaaccagcagcaggccgcgagcctggag
gaaaccgccgcggccatggcgcaagtgaccgaccgcatccgcgaatcggcaggcaccgcc
gcccaggcgcaggaggccatcaccacggcccacgacgaggccagcgaaggcggcgaagtg
gtccgcgccgccgtctccgcgatgtccgccatcgagacctcggcccgcgagatttcgacc
atcatcgacctcattgatggtattgccttccagaccaatctcctggccctcaacgccggg
gtcgaagccgcgcgcgcaggcgatgcgggcaagggcttcgcggtcgtcgccaacgaggtg
cgcgatctcgcccagcgttcggccgacgcggcgcaccagatcaaggagctcatcaccaag
agcagcgcgcaagtggaaggcggcgtcgagctggtcggcgagaccggcacccggctcgag
gccatcctggcgcaagtgagcgaactgcgcagcttcatcgcgcagatggccacctcggcg
cgccagcaggcgagcgacctcgatcaggtcaacacctcggtcggcgaaatggaccgcatg
acccagcagaacgcggccatggtcgaggaaacgaccgccgcgacccgaagcctggaaagc
gaagcgcgcggcctcagcgaactcatggcgggcttccgcacccgcatgcgcgaggaccgc
cccgagatcgcgggacagggcgagcccttgcggcggaccagcgcggcggcctga
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