Novosphingobium decolorationis: HT578_19000
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Entry
HT578_19000 CDS
T07993
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ndr
Novosphingobium decolorationis
Pathway
ndr00470
D-Amino acid metabolism
ndr00550
Peptidoglycan biosynthesis
ndr01100
Metabolic pathways
ndr01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HT578_19000
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HT578_19000
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HT578_19000
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ndr01011
]
HT578_19000
Enzymes [BR:
ndr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
HT578_19000
Peptidoglycan biosynthesis and degradation proteins [BR:
ndr01011
]
Precursor biosynthesis
Amino acid ligase
HT578_19000
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
TrkA_N
B12-binding
Motif
Other DBs
NCBI-ProteinID:
QVM85512
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All DBs
Position
4118627..4119583
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AA seq
318 aa
AA seq
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MTLPKLHVAVLMGGWSNERPVSLMSGEGVAKALESKGHKVTRIDMDREVAQRLAEAKPDV
VFNALHGAPGEDGTVQGMMDLMGLTYTHSGLATSVIAIDKELTKQALVPHGVPMPGGRVV
ETETLFTKDPLPRPYVLKPVNEGSSVGVAIVTEEGNYGNPISREAKGPWQEFATLLAEPY
IRGRELTTAVIGERALLVTELKPKSGFYDFDSKYTDGMTEHVCPADVPAEITEACKALAL
RAHQLLGCKGTSRSDFRWDDTQGVEGLFLLETNTQPGMTPLSLVPEQAKACGIEYPDLVE
AIIAEALADVKPHKATSP
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
gtgacactccccaagctccacgtcgccgtcctgatgggtggctggtcgaacgaacgtccc
gtctcgctgatgagcggcgaaggcgtggccaaggcgcttgagagcaagggccacaaggtc
acgcgcatcgacatggaccgcgaggtcgcgcagcgcctcgccgaggcgaagcccgatgtt
gtcttcaacgcgctgcacggcgcgccgggcgaggacggtacggtgcagggcatgatggac
ctgatgggcctcacctacacgcattcagggctcgcgacttcggtcatcgcgatcgacaag
gaactgaccaagcaggcgctcgtcccgcatggcgtgcccatgcccggcggccgcgtggtc
gagaccgagacgctgttcacgaaggacccgctgccccgtccttacgtgctcaagcccgtc
aacgaaggctcgtcggtgggcgtcgccatcgtcacggaggagggcaattacgggaacccg
atcagccgagaggccaagggcccctggcaggaattcgcgacgctcctggccgagccctac
attcgcggccgcgagctgacgacggcggtgatcggtgagcgcgcgctgctcgtcaccgaa
ctcaagcccaagtccggtttctacgacttcgattccaagtacaccgacggcatgaccgag
catgtctgccccgccgacgtccccgccgagatcaccgaggcgtgcaaggcgctggcgttg
cgcgcgcaccagctcctggggtgcaagggcaccagccgttcggacttccgctgggatgac
acgcaaggggtggaggggctgttcctgctggagaccaacacccagcccggcatgaccccg
ctcagcctcgttcccgaacaggccaaggcctgcgggatcgagtaccccgaccttgtcgag
gcgatcattgccgaggcgctggccgatgtgaaaccgcacaaggccacttcgccatga
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