Nocardiopsis eucommiae: KGD82_05570
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Entry
KGD82_05570 CDS
T08767
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nec
Nocardiopsis eucommiae
Brite
KEGG Orthology (KO) [BR:
nec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nec03016
]
KGD82_05570 (truB)
Enzymes [BR:
nec01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KGD82_05570 (truB)
Transfer RNA biogenesis [BR:
nec03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KGD82_05570 (truB)
Prokaryotic type
KGD82_05570 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QVJ02211
UniProt:
A0A975QK21
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All DBs
Position
1237712..1238590
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AA seq
292 aa
AA seq
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MADSGVVVVDKPADWTSHDVVAKTRGLARTRRVGHAGTLDPMATGVLVLGIEKGTKLLGH
LTLTQKTYEATIRLGLVTNTDDAEGEPGARVDASAVTDADVRAAVAKLTGPIQQVPPQVS
AIKVDGKRAYKSAREGKEVALRARTVTISQFDVTAVRHTPDGFVDVDAVITGSSGTYIRA
LARDMGADLAVGGHLTALRRTRVGPYDLSQARTLDELAKEFTQVPLAQAVAAAFPVRTMD
EAETRAIRHGNRISESSLGDGPVGLFAPDGTVVALGENRPGHMKPVVVFSPA
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggccgacagcggtgtcgtggtcgtcgacaagcccgccgactggacctcacacgacgtg
gtcgcgaagacccggggtctggcgcgcacccgacgcgtgggccacgcgggcaccctggac
ccgatggccaccggggtcctggtcctggggatcgagaagggcaccaagctgctcggtcac
ctgaccctgacccagaagacctacgaggccacgatccgcctcggcctggtcaccaacacc
gacgacgccgagggtgagcccggagcccgggtggacgcctccgccgtcaccgacgccgac
gtgcgcgccgccgtcgcgaagctcaccggcccgatccagcaggtcccgccgcaggtcagc
gcgatcaaggtggacggcaagcgcgcctacaagtcggcccgtgagggcaaggaggtggcg
ctcagggcgcggacggtcaccatctcccagttcgacgtgaccgccgtccggcacaccccg
gacggcttcgtggacgtggacgcggtgatcaccggctccagcggcacctacattcgcgcg
ctcgcgcgcgacatgggcgcggacctggccgtgggcgggcacctcaccgccctgcgccgc
acccgggtgggcccctacgacctgtcccaggcccgcacgctcgacgaactcgccaaggag
ttcacccaggtccccctggcccaggccgtggcagccgcgttcccggtccgcaccatggac
gaggccgagacccgtgcgatccgccacgggaaccggatcagcgagagctccctgggcgac
ggtcccgtggggttgttcgcgccggacggcaccgtggtcgccctgggcgagaaccgcccg
ggccacatgaagccggtcgtggtcttctcaccggcctga
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