Neorhizobium sp. NCHU2750: NCHU2750_00600
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Entry
NCHU2750_00600 CDS
T05650
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
nen
Neorhizobium sp. NCHU2750
Pathway
nen00300
Lysine biosynthesis
nen01100
Metabolic pathways
nen01120
Microbial metabolism in diverse environments
nen01230
Biosynthesis of amino acids
Module
nen_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
nen00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NCHU2750_00600 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nen01002
]
NCHU2750_00600 (dapE)
Enzymes [BR:
nen01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
NCHU2750_00600 (dapE)
Peptidases and inhibitors [BR:
nen01002
]
Metallo peptidases
Family M20
NCHU2750_00600 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
AYC99462
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Position
complement(58648..59844)
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AA seq
398 aa
AA seq
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MSAVDPIANLQTLIRCPSVTPAEGGALTALEAMLTPLGFTVERMVAKEPGMPDIENLYAR
LGTDGPHLMFAGHTDVVPVGDEASWSHPPFSAEIDGGEMFGRGAVDMKGGIACFVAAVAR
HIEKHGAPDGSISFLITGDEEGPAINGTEKLLKWAAERGERWDACLVGEPTNPDVLGDMI
KIGRRGSVSGRVTVFGVQGHAAYPHLADNAVRGLLPLASALMDPPFDGGTPEFPASNLEV
TTVDVGNPATNVVPAKATFAFNIRFNDTWTADTVKAEIIRRLDAAAGDAVLRPGRDPIRY
EIIWAERPSHVFLTRNNALIGSLSAAVEAVTGRQPQLSTTGGTSDARFIKDYCPVVEFGL
VGQTMHMVDERVALADLETLTQIYGTFLSRWFGDAILS
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgtcgatccgattgcaaacctgcaaacgctgatccgttgcccttccgtcact
ccggcggaaggtggcgcgctcacggcccttgaggccatgctcacgccgctcggctttacg
gtcgagcggatggtggcaaaagaacccggcatgccggacatcgaaaacctttatgcgcgg
ctcggcaccgacgggccgcacctgatgtttgccggccatacggacgtggtgccggtcggc
gacgaggcctcctggagccacccgccattttccgccgaaattgacggcggagagatgttc
ggacgcggtgccgtcgacatgaagggcggcattgcctgtttcgtggcagccgtcgcccgc
catatcgaaaagcatggcgcacccgatggctcgatctctttcctgatcaccggcgacgag
gaaggcccggccatcaacggcacggaaaagctgttgaaatgggcggccgaaaggggcgag
cgctgggacgcctgtctcgtcggcgaaccgaccaatccggacgttctcggcgacatgatc
aagatcggccgccgcggttcggtttccgggcgggtgacggtattcggcgtgcagggccat
gccgcctatccgcatctcgccgacaacgccgtacgcgggcttctgccgctcgcctcggcg
ctgatggatccgcccttcgacggcggtacaccggaatttccggcttccaaccttgaagtg
acgacggtcgatgtgggcaacccggcaaccaatgtcgtgccggccaaggcgacattcgcc
ttcaacatccgcttcaacgacacctggaccgccgatacggtgaaggccgagatcattcgc
aggctcgatgccgcggcgggtgacgccgtgcttcgcccgggccgcgatccgatccgctac
gagatcatctgggccgaacgcccgagccatgtattcctgacccgcaacaacgcgctgatc
ggatcgctttcggcggccgtcgaggcggtgaccgggcgccagccgcagctttccaccacc
ggcggaacctcggatgcgcgattcatcaaggactattgcccggtggtcgagttcgggctt
gtcggccagaccatgcatatggtcgatgaacgcgtggcacttgccgatctcgaaacgctg
acccagatttacggaacattcctctcccgctggttcggcgatgccatcctttcctga
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