Nitrosomonas europaea: NE0732
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Entry
NE0732 CDS
T00130
Symbol
ybbB
Name
(GenBank) Rhodanese/cdc25 fold
KO
K06917
tRNA 2-selenouridine synthase [EC:
2.9.1.3
]
Organism
neu
Nitrosomonas europaea
Brite
KEGG Orthology (KO) [BR:
neu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
neu03016
]
NE0732 (ybbB)
Enzymes [BR:
neu01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.3 tRNA 2-selenouridine synthase
NE0732 (ybbB)
Transfer RNA biogenesis [BR:
neu03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
NE0732 (ybbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhodanese
AAA_16
AAA_22
ResIII
T2SSE
ATPase_2
AAA_18
nSTAND3
AAA_7
AAA_23
cobW
AAA_19
Rad17
NB-ARC
AAA_14
AAA_28
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
CAD84643
UniProt:
Q82WE9
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All DBs
Position
complement(793128..794285)
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AA seq
385 aa
AA seq
DB search
MRNPDIGIDDLTALFIADTPLIDVRAPVEFTQGSLPGAVNLPILNDEERALVGTTYKQQG
SEAAIKLGYEMVSGSVKQNRLQQWLDFIHQHPRAILYCFRGGKRSQITQQWLRDTGIDSP
LITGGYKRARQFLISTIDRFSEHRKLLVITGPTGSGKTRLIHDISNSHPVLDIEALARHR
GSAFGGMSVPQPSQIDFENHLAVNLLKLEQNNLSEPVIVEDESRHTGKVYLPDSFFHHLR
NSEIIWVDEPLATRVDNIFEDYILTTPIGQAQRIRQAIPPLASTVETREILRQQARQLFD
KYAGALQAISKKLGGDRFQEVSEDLENARSDFENKNEIQSNKIWIEKLVRYYYDPLYLGS
LQRRRVNPCFKGSGQAVMDYLQARK
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtaatccagacatcggcatcgatgacctgacggccttattcatagcagatacgccg
ctgatcgacgtacgtgcacccgtcgagttcacgcaaggatctctgcccggtgcagtcaat
ctgcccatcctcaacgatgaggaacgtgcccttgtcggcaccacctacaagcaacaaggc
tctgaagcggccatcaaactgggctatgagatggtttcgggttcagtcaaacaaaatcga
ctgcagcagtggctcgatttcatccatcagcaccctcgagccatactgtattgtttccgt
gggggcaagcgttcacagatcacacagcaatggctgagggataccggtattgacagcccc
ctgatcaccggcggttataaacgggcaagacaatttttaatcagtaccatcgaccggttc
agtgaacatcgtaaactgctggtgattaccgggccgacgggcagcggcaaaactcggctg
atccacgacatcagcaacagtcatccagtcctcgacatcgaagcccttgcccggcatcgc
ggctccgccttcggcggaatgtctgttcctcaaccttcacaaatcgatttcgaaaaccac
ctggccgtcaacctgctcaagctggaacaaaacaacctgtctgaaccggtaatcgtggaa
gatgaaagccggcataccggcaaagtatatttgcctgacagttttttccatcatctgcgc
aattcggaaatcatctgggtagatgaaccccttgccacccgagtagataacatttttgag
gattacatcctcactacaccgatcggccaggcacaacggattcggcaagcgatcccgcca
ctggcttcaacggttgaaactcgggaaatactgcgtcagcaggcaaggcagctatttgac
aaatacgccggtgccttgcaggcaatcagtaagaaactgggaggagacagatttcaggaa
gtgtcagaagatctggaaaatgcacgatccgactttgaaaacaaaaatgaaattcaatcg
aacaaaatctggatcgaaaaactggtgagatactactacgacccactgtatctcggatca
ctgcagcgccgtcgcgtaaacccctgtttcaaaggatcggggcaggccgtaatggattat
cttcaggctcgtaaataa
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