Nocardia farcinica IFM 10152: NFA_2630
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Entry
NFA_2630 CDS
T00207
Name
(GenBank) putative ABC transporter
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
nfa
Nocardia farcinica IFM 10152
Pathway
nfa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NFA_2630
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nfa02000
]
NFA_2630
Transporters [BR:
nfa02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NFA_2630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
ABC_ATPase
Zeta_toxin
AAA_23
AAA_29
RsgA_GTPase
T2SSE
AAA_22
AAA_21
AAA_30
cobW
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
BAD55105
NIH_Japan:
nfa2630
UniProt:
Q5Z386
LinkDB
All DBs
Position
269248..270984
Genome browser
AA seq
578 aa
AA seq
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MLIRLLRTYLSPYRAQLAGVVALQLVSVIAMLYLPSLNADLIDNGVTKGDIDYIWHTGLW
MLAVTAVQIVASASSVFLGAQAAMSAGRDLRAALVHRVGTFSAREVGLFGAPSLITRNTN
DVQQVQLLVVMSVTVLVMAPIMCVGGIIMALREDLKLSWLLLIAVPALALAMGLVVARLV
PGFREMQARIDVVNRVLREQITGIRVVRAFVRERQETWRFGLANTDLTEASLRVGRLMAL
MFPVVMLISNVTTVAVIWFGGHLIDDGELQIGSLTAMLSYIMQILMAVMMASFLAMMAPR
AAVSADRIGAVLTTESSVVPPEFPKPFAGDPGRVEFAAAEFAFPGAEKPVLRGIRFTVEP
GTTTAIVGSTGAGKTTLLNLIPRLIDVTAGAVYVGGTDVRELDMELLREQIGLVPQKAYL
FSGTVASNLRYGRPDATDEELWRALEIAQAADFVRDMPQGLETPVAQGGTTVSGGQRQRL
AIARALVRRPRVYLFDDSFSALDVATDARLREALRPETRDASVIIVAQRVSTIRDADQII
VLEDGEMAGIGTHEQLLRDCAEYQEIVASQLSAQEEVR
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgttgatcagactgctcaggacgtatctgtccccgtaccgcgcgcagctggcgggggtc
gttgcgctccagctggtttcggtcatcgccatgctctacctgccgagcctgaacgccgat
ctcatcgacaacggcgtcaccaagggcgacatcgactacatctggcacaccggcctgtgg
atgctggcggtgaccgcggtgcagatcgtggcgtcggcctcgtcggtgttcctcggcgcc
caggcggcgatgagcgccggccgcgacctgcgcgccgcgctggtgcaccgggtgggcacc
ttctccgcccgcgaggtcggcctgttcggcgcgccctcgctgatcacccgcaacaccaac
gacgtgcagcaggtgcagctgctggtggtgatgtcggtgacggtgctggtgatggcgccg
atcatgtgcgtgggcggcatcatcatggcgctgcgcgaggacttgaaactgtcctggctg
ctgctcatcgcggtgcccgcgctggcgttggcgatgggtctggtggtggccaggctggtg
cccggcttccgggagatgcaggcccgcatcgacgtggtgaaccgggtgctgcgcgagcag
atcaccggcatcagggtggtccgcgccttcgtgcgggaacggcaggagacctggcggttc
ggcctggcgaacaccgatctcaccgaggcctcgctgcgggtgggcaggctgatggcgctg
atgttcccggtggtcatgctgatcagcaacgtcaccacggtggcggtgatctggttcggc
gggcacctgatcgacgacggcgaactgcagatcggctcgctcaccgcgatgctgtcctac
atcatgcagatcctgatggcggtcatgatggcctcgttcctggccatgatggccccgcgc
gcggcggtgtcggcggaccggatcggcgccgtgctcaccaccgagtcctcggtggtgccg
ccggaattcccgaagccgttcgccggggaccccggccgggtggagttcgccgcggccgag
ttcgccttccccggcgccgagaagccggtgctgcgcgggatccgcttcaccgtcgagccg
ggcaccaccaccgcgatcgtcggctccaccggtgcgggcaagaccacgctgctcaacctg
atcccgcgactgatcgacgtcaccgccggtgcggtgtacgtgggcggcaccgatgtgcgc
gagctggacatggaactgctgcgcgagcagatcggcctggtgccgcagaaggcgtacctg
ttctccgggacggtggcgagcaacctgcgctacggccgaccggacgccaccgacgaggaa
ctgtggcgcgcgctcgagatcgcccaggccgccgacttcgtgcgggacatgccgcaggga
ctcgagacgccggtggcgcagggcggcaccaccgtgtccggcgggcaacgccagcgcttg
gccatcgcccgcgccctggtgcgcaggccgcgggtgtacctgttcgacgactcgttctcc
gcgctcgacgtcgccaccgatgccaggctgcgcgaggcgctgcgccccgagaccagggac
gcctcggtgatcatcgtcgcccagcgggtgtcgaccatccgcgacgcggaccagatcatc
gtgctcgaggacggtgagatggcgggcatcggcacgcacgagcagctgctgcgcgactgc
gccgaataccaggagatcgtggcgtcgcagctcagcgcgcaggaggaggtccgatga
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