Nocardia farcinica IFM 10152: NFA_28010
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Entry
NFA_28010 CDS
T00207
Name
(GenBank) putative ABC transporter
KO
K14698
ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
Organism
nfa
Nocardia farcinica IFM 10152
Pathway
nfa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NFA_28010
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nfa02000
]
NFA_28010
Transporters [BR:
nfa02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NFA_28010
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_16
AAA_22
AAA_29
AAA_21
RsgA_GTPase
AAA_25
AAA_30
AAA_33
AAA_15
Zeta_toxin
nSTAND1
AAA_18
AAA_5
AAA_23
AAA_24
Motif
Other DBs
NCBI-ProteinID:
BAD57648
NIH_Japan:
nfa28010
UniProt:
Q5YVZ3
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All DBs
Position
2989329..2991143
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AA seq
604 aa
AA seq
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MTATDLAEAREQDTPVTSVAPERTAMSLLRPHLPGFAAVVVLQVVGALAGLVPLLAVVEL
GRILLSPAPIQEGRVWSVVLAGAAGLFVRLVCGAAASGLAHLLDSRVQLAFRRQLAARLG
TVPIGWFSRRRTGELAKVVGEDVSAVHPFLAHTPGELVSAFVVPSASLIYLFTVDWRLTL
ITLVPVLLAVAVVPLMTTSARQREQAEFDAAMGRIADSVVEFVQGIAVVKTFGGAGRANR
RFHRAADEFADTFLRMVRGLAGPAAAMQVALSPPFVLLAVLIGGTVLIRAGDMPPADLLP
FLLLGLGLTAPVAALGHGFDDLQAARRAIGRIREVLAEPPLPEPARPAVPRGHRIELRDV
RFGYDAGRDVLRGIDLVLEPGTVTALVGPSGSGKSTLVQLLPRFFDPTHGSVRLGGVDLR
DLAPAQLYRTVSFVFQDVRLLRASIADNIALAVPHADRDAIERAARGAAIHDRILELPNG
YDSVVGVDVVLSGGEAQRLSLARALLAATPVLVLDEATAFADPQTEQAVRRTLSALGGDR
TLLVIAHRLETIADADTVAVLDNGTIVERGSPRELLARGGRFAALWETHRTAVADRPSRE
EAPR
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaccgatctcgccgaggcacgcgagcaggacacgccggtcacctcggtcgca
cccgaacggaccgcgatgagcttgctgcgcccgcatctgccgggcttcgccgccgtggtc
gtgctgcaggtcgtcggcgcgctggcgggtctggtgccgctgctggccgtggtggaactg
ggccggatcctcctgtcgccggcaccgatccaggaggggcgggtctggtcggtggtgctc
gcgggcgcggccgggttgttcgtgcggctggtgtgcggcgccgcggcgtcggggctcgcg
catctgctcgacagccgggtgcaactcgcgttccggcggcagctcgcggcccggctgggc
acggtgccgatcggctggttctcccggcggcgcaccggggaactggcgaaggtggtcggc
gaggacgtcagcgccgtgcacccgttcctcgcgcacacaccgggcgaactcgtctccgcc
ttcgtggtgccgtcggcctcgctgatctatctgttcaccgtggactggcggctgacgttg
atcaccctcgttccggtgctgctggccgtggcggtggtgccactgatgacgacgtccgcg
cggcaacgcgaacaagcggagttcgacgcggcgatgggccggatcgcggactcggtggtg
gagttcgtgcagggcatcgcggtggtcaagacgttcggcggtgccggtcgcgccaatcgc
cggttccaccgcgccgccgacgaattcgccgacaccttcttgcggatggtgcgtggcctg
gccggaccggcggccgcgatgcaggtggcgctgtcgccgccgttcgtcctgctggccgtg
ctgatcggcggcacggtcctgatccgcgccggcgacatgcccccggcggatctgttgccg
ttcctgctgctcggcctcggactcaccgcgcccgtcgcggcactggggcacggcttcgac
gacctccaggccgcccgccgcgcgatcggccggatccgggaggtgctggccgagccgccg
ctgccggagcccgcgcggcccgccgttccgcgggggcatcggatcgaactgcgcgacgtg
cgtttcggctacgacgccggccgcgacgtgctgcgcggcatcgacctggtgctcgaaccc
ggcaccgtcacggccctggtcgggccgtcgggcagcggcaaatcgaccctggtgcaactg
cttccgcgattcttcgacccgacccacggatcggtccggctcggcggcgtcgacctgcgt
gacctcgcccccgcacagctgtaccggacggtgtcgttcgtcttccaggatgtgcggctg
ctgcgcgcctcgatcgcggacaacatcgcgctcgcggtgccgcacgccgaccgcgacgcc
atcgaacgggcggcgcgaggcgccgccatccacgaccgcatcctggaactgccgaacggg
tacgactcggtggtcggcgtcgatgtggtcctgtccggcggtgaggcgcaacgtctttcg
ctcgcccgcgccctgctggccgccacgccggtgctggtactcgacgaggcgaccgccttc
gccgatccgcagaccgaacaggcggtgcgccggaccctgtccgcactcggcggcgaccgc
acgctcctggtgatcgcgcaccgtctcgagaccatcgccgacgccgacaccgtcgcggta
ctcgacaacggcaccatcgtcgaacgcggcagtccccgtgagctgctggcccgcggcggc
cgcttcgccgccctctgggaaacccaccgcaccgcggtcgccgaccgcccctcgcgagaa
gaggcaccccgatga
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